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The map label for this gene is ruvA [H]

Identifier: 158316901

GI number: 158316901

Start: 6167330

End: 6168049

Strand: Reverse

Name: ruvA [H]

Synonym: Franean1_5145

Alternate gene names: 158316901

Gene position: 6168049-6167330 (Counterclockwise)

Preceding gene: 158316902

Following gene: 158316900

Centisome position: 68.67

GC content: 78.33

Gene sequence:

>720_bases
ATGATCGCGTCGGTCAGCGGCACGGTGGAGGTGCTCTCGCCCGGCTCGGCGGTCGTCGACGTCGGTGGCGTCGGCGTCCT
GGTGTGGTGTACGCCGTCGACGCTGGCCCGGCTGCGGGTCGGCGAGCGCGCGCGGTTGGCGACGACCCTCGTCGTCCGGG
AGACCGAGCTGACGCTGTACGGGTTCCGCGACGCCGACGAGCGAGACGTCTTCGAGATCCTGCAGGGCGCGGCCGGGGTG
GGGCCCAGGCTCGCCCAGGCCGTCCTCGGCGTGCACAGTCCGGACGTCATCCGCCGGGCTGTCGCGGAGGAGGACCTGGC
CACGCTCACCAAGGTGCCGGGCATCGGCCGCAAGAGCGCCCAGCGCATCGTGCTCGACCTGCGGGACAGGCTCGGCCCGC
CGTCCTCCCCGGTCCCGCCGCAGCGCGCCGCGGCGCCGCCGCCGGCCGCCGCGGATCCGCGTCTCGGCGCCGCGGGCGAG
CAGGTCCGGGACGCGCTGGTCGGCCTCGGTTACTCCGCGAAGGAGGCGCTGGACGCGGTGGTCGCGGCTCGGACGGCGCT
GCACGGCCCCGGCGACGGCGCGGCCGTGACCGGCGGCGCGGCGGGTGGCGACGGTGACGGCGCGGCGGGTGACGGCGCGG
CGGGCGGCGCGGACCCCGCCGGTCCGGTCGACCCCGCGGCGCTGCTGCGGGCGAGCCTCGCCGTGCTGCGGCCGCGATGA

Upstream 100 bases:

>100_bases
CGCTCGCCCTGGCCCTGTGCCACCTGTGGCGCGGGCCGGCACTGGCCCGGATGCGCGCCGCGACCCCCGCGCGGAGCCCG
GGCGTGCCGGGTGGCCGGCG

Downstream 100 bases:

>100_bases
CGCCCCGGATGACGACGCCCCGGATGTCGCCGTGAGCGGCGAGGGCCTGGTCTCGGCGGCGGCGGCCCCCGAGGAGCAGG
CGTTCGAGGCCGGCCTGCGC

Product: DNA recombination protein RuvA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 239; Mature: 239

Protein sequence:

>239_residues
MIASVSGTVEVLSPGSAVVDVGGVGVLVWCTPSTLARLRVGERARLATTLVVRETELTLYGFRDADERDVFEILQGAAGV
GPRLAQAVLGVHSPDVIRRAVAEEDLATLTKVPGIGRKSAQRIVLDLRDRLGPPSSPVPPQRAAAPPPAAADPRLGAAGE
QVRDALVGLGYSAKEALDAVVAARTALHGPGDGAAVTGGAAGGDGDGAAGDGAAGGADPAGPVDPAALLRASLAVLRPR

Sequences:

>Translated_239_residues
MIASVSGTVEVLSPGSAVVDVGGVGVLVWCTPSTLARLRVGERARLATTLVVRETELTLYGFRDADERDVFEILQGAAGV
GPRLAQAVLGVHSPDVIRRAVAEEDLATLTKVPGIGRKSAQRIVLDLRDRLGPPSSPVPPQRAAAPPPAAADPRLGAAGE
QVRDALVGLGYSAKEALDAVVAARTALHGPGDGAAVTGGAAGGDGDGAAGDGAAGGADPAGPVDPAALLRASLAVLRPR
>Mature_239_residues
MIASVSGTVEVLSPGSAVVDVGGVGVLVWCTPSTLARLRVGERARLATTLVVRETELTLYGFRDADERDVFEILQGAAGV
GPRLAQAVLGVHSPDVIRRAVAEEDLATLTKVPGIGRKSAQRIVLDLRDRLGPPSSPVPPQRAAAPPPAAADPRLGAAGE
QVRDALVGLGYSAKEALDAVVAARTALHGPGDGAAVTGGAAGGDGDGAAGDGAAGGADPAGPVDPAALLRASLAVLRPR

Specific function: The ruvA-ruvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is an helicase that mediates the Holliday

COG id: COG0632

COG function: function code L; Holliday junction resolvasome, DNA-binding subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ruvA family [H]

Homologues:

Organism=Escherichia coli, GI1788168, Length=181, Percent_Identity=34.8066298342541, Blast_Score=94, Evalue=6e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011114
- InterPro:   IPR013849
- InterPro:   IPR003583
- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR000085
- InterPro:   IPR010994 [H]

Pfam domain/function: PF07499 RuvA_C; PF01330 RuvA_N [H]

EC number: =3.6.4.12 [H]

Molecular weight: Translated: 23854; Mature: 23854

Theoretical pI: Translated: 5.35; Mature: 5.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIASVSGTVEVLSPGSAVVDVGGVGVLVWCTPSTLARLRVGERARLATTLVVRETELTLY
CCCCCCCCEEEECCCCEEEEECCCEEEEEECCHHHHHHHCCCHHHHHEEEEEEECEEEEE
GFRDADERDVFEILQGAAGVGPRLAQAVLGVHSPDVIRRAVAEEDLATLTKVPGIGRKSA
ECCCCCHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHH
QRIVLDLRDRLGPPSSPVPPQRAAAPPPAAADPRLGAAGEQVRDALVGLGYSAKEALDAV
HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHH
VAARTALHGPGDGAAVTGGAAGGDGDGAAGDGAAGGADPAGPVDPAALLRASLAVLRPR
HHHHHHHCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCC
>Mature Secondary Structure
MIASVSGTVEVLSPGSAVVDVGGVGVLVWCTPSTLARLRVGERARLATTLVVRETELTLY
CCCCCCCCEEEECCCCEEEEECCCEEEEEECCHHHHHHHCCCHHHHHEEEEEEECEEEEE
GFRDADERDVFEILQGAAGVGPRLAQAVLGVHSPDVIRRAVAEEDLATLTKVPGIGRKSA
ECCCCCHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHH
QRIVLDLRDRLGPPSSPVPPQRAAAPPPAAADPRLGAAGEQVRDALVGLGYSAKEALDAV
HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHH
VAARTALHGPGDGAAVTGGAAGGDGDGAAGDGAAGGADPAGPVDPAALLRASLAVLRPR
HHHHHHHCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12000953 [H]