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The map label for this gene is ruvB

Identifier: 158316900

GI number: 158316900

Start: 6166237

End: 6167298

Strand: Reverse

Name: ruvB

Synonym: Franean1_5144

Alternate gene names: 158316900

Gene position: 6167298-6166237 (Counterclockwise)

Preceding gene: 158316901

Following gene: 158316899

Centisome position: 68.66

GC content: 74.29

Gene sequence:

>1062_bases
GTGAGCGGCGAGGGCCTGGTCTCGGCGGCGGCGGCCCCCGAGGAGCAGGCGTTCGAGGCCGGCCTGCGCCCGAAGAACCT
GGACGAGTTCGTCGGCCAGCGCAAGGTGCGGGAGCAGCTTTCGATCATGCTCGAGGGGGCGCGCGGCCGCGGCCGCCCGC
CTGACCACGTGCTCCTGTCCGGTCCACCCGGGCTGGGTAAGACGAGCCTGGCGATGATCATTGCCGAGGAGCTCGGCGTG
CCGCTGCGGATGACCAGCGGCCCGGCGATCGAGCGGGCCGGTGACCTGGTGGCGATCCTGACCGCGCTCACGCCCGGCGA
GGTGCTCTTCCTCGACGAGATCCACCGCATCGCCCGTCCCGCCGAGGAGCTGCTGTACGCGGCGATGGAGGACTTCCGCG
TCGACGTGGTCCTCGGCAAGGGCCCGGGCGCGACGGCGATCCCGCTCGACCTGGCGCCGTTCACGCTGGTCGGCGCCACG
ACCCGCTCCGGCCTGCTGACCGGCCCGCTGCGGGACAGGTTCGGCTTCACCGCCCACATGGACTTCTACGACGCCGCCGA
ACTTGCGCTGGTGCTGACGCGCTCGGCCCGGCTGCTCGGTGTCCAGCTGACCGAGGGCGGCGCGGCCGAGGTGGCGGGCC
GCTCCAGGGGCACCCCGCGGATCGCGAACCGGCTGCTGCGCCGGGTCCGCGACTACGCGGAGGTTCGTGCCGACGGTGTG
GTCTCCCGCGAGGTGGCCCGCGCCGCCCTGCGGATCTACGACGTGGACGCTCTCGGCCTGGACCGGCTCGACCGGGCGGT
GCTCGACGCGCTGGTCCGCCGGTTCGGCGGCGGGCCGGTGGGGCTGAGCACCCTTGCCGTGGCGGTGGGCGAGGAGGCCG
ACACGGTCGAGGACGTCTCGGAACCGTTCCTGCTCCGGGCCGGCCTGCTGATCCGCACGGCCCGGGGGAGGGTGGCGACC
CCGGCCGCGTTCACCCACCTGGGCCTCGAGCCTCAGTCGGACCAACTCGGCAGGTCACAGGCACCGGCGGCCCTGTTCGG
GGAGGACCTGCCGGCGTCCTGA

Upstream 100 bases:

>100_bases
GACCCCGCCGGTCCGGTCGACCCCGCGGCGCTGCTGCGGGCGAGCCTCGCCGTGCTGCGGCCGCGATGACGCCCCGGATG
ACGACGCCCCGGATGTCGCC

Downstream 100 bases:

>100_bases
ACCGCCATCCGGGTGGGTCGGCCGGTGCCTTCGGGGAACACACCACCGGCCTGCCCGCTGTGGGTGTGGCGCGGATACGT
ACGATCAGCCGCGACACCCA

Product: Holliday junction DNA helicase RuvB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 353; Mature: 352

Protein sequence:

>353_residues
MSGEGLVSAAAAPEEQAFEAGLRPKNLDEFVGQRKVREQLSIMLEGARGRGRPPDHVLLSGPPGLGKTSLAMIIAEELGV
PLRMTSGPAIERAGDLVAILTALTPGEVLFLDEIHRIARPAEELLYAAMEDFRVDVVLGKGPGATAIPLDLAPFTLVGAT
TRSGLLTGPLRDRFGFTAHMDFYDAAELALVLTRSARLLGVQLTEGGAAEVAGRSRGTPRIANRLLRRVRDYAEVRADGV
VSREVARAALRIYDVDALGLDRLDRAVLDALVRRFGGGPVGLSTLAVAVGEEADTVEDVSEPFLLRAGLLIRTARGRVAT
PAAFTHLGLEPQSDQLGRSQAPAALFGEDLPAS

Sequences:

>Translated_353_residues
MSGEGLVSAAAAPEEQAFEAGLRPKNLDEFVGQRKVREQLSIMLEGARGRGRPPDHVLLSGPPGLGKTSLAMIIAEELGV
PLRMTSGPAIERAGDLVAILTALTPGEVLFLDEIHRIARPAEELLYAAMEDFRVDVVLGKGPGATAIPLDLAPFTLVGAT
TRSGLLTGPLRDRFGFTAHMDFYDAAELALVLTRSARLLGVQLTEGGAAEVAGRSRGTPRIANRLLRRVRDYAEVRADGV
VSREVARAALRIYDVDALGLDRLDRAVLDALVRRFGGGPVGLSTLAVAVGEEADTVEDVSEPFLLRAGLLIRTARGRVAT
PAAFTHLGLEPQSDQLGRSQAPAALFGEDLPAS
>Mature_352_residues
SGEGLVSAAAAPEEQAFEAGLRPKNLDEFVGQRKVREQLSIMLEGARGRGRPPDHVLLSGPPGLGKTSLAMIIAEELGVP
LRMTSGPAIERAGDLVAILTALTPGEVLFLDEIHRIARPAEELLYAAMEDFRVDVVLGKGPGATAIPLDLAPFTLVGATT
RSGLLTGPLRDRFGFTAHMDFYDAAELALVLTRSARLLGVQLTEGGAAEVAGRSRGTPRIANRLLRRVRDYAEVRADGVV
SREVARAALRIYDVDALGLDRLDRAVLDALVRRFGGGPVGLSTLAVAVGEEADTVEDVSEPFLLRAGLLIRTARGRVATP
AAFTHLGLEPQSDQLGRSQAPAALFGEDLPAS

Specific function: The ruvA-ruvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is an helicase that mediates the Holliday

COG id: COG2255

COG function: function code L; Holliday junction resolvasome, helicase subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ruvB family

Homologues:

Organism=Escherichia coli, GI1788167, Length=331, Percent_Identity=53.4743202416918, Blast_Score=365, Evalue=1e-102,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RUVB_FRASN (A8KZE6)

Other databases:

- EMBL:   CP000820
- RefSeq:   YP_001509408.1
- ProteinModelPortal:   A8KZE6
- SMR:   A8KZE6
- GeneID:   5673478
- GenomeReviews:   CP000820_GR
- KEGG:   fre:Franean1_5144
- HOGENOM:   HBG339960
- OMA:   EKFDGGP
- ProtClustDB:   PRK00080
- BioCyc:   FSP1855:FRANEAN1_5144-MONOMER
- HAMAP:   MF_00016
- InterPro:   IPR003593
- InterPro:   IPR004605
- InterPro:   IPR008823
- InterPro:   IPR008824
- InterPro:   IPR011991
- Gene3D:   G3DSA:1.10.10.10
- ProDom:   PD005323
- SMART:   SM00382
- TIGRFAMs:   TIGR00635

Pfam domain/function: PF05491 RuvB_C; PF05496 RuvB_N

EC number: =3.6.4.12

Molecular weight: Translated: 37373; Mature: 37242

Theoretical pI: Translated: 5.16; Mature: 5.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGEGLVSAAAAPEEQAFEAGLRPKNLDEFVGQRKVREQLSIMLEGARGRGRPPDHVLLS
CCCCCCEECCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEE
GPPGLGKTSLAMIIAEELGVPLRMTSGPAIERAGDLVAILTALTPGEVLFLDEIHRIARP
CCCCCCHHHHHHHHHHHCCCCEEECCCCCHHHHCCHHHHHHHCCCCCEEEHHHHHHHHCH
AEELLYAAMEDFRVDVVLGKGPGATAIPLDLAPFTLVGATTRSGLLTGPLRDRFGFTAHM
HHHHHHHHHHHCEEEEEEECCCCCCEEECCCCCEEEEECCCCCCCEECCHHHHCCCEEEC
DFYDAAELALVLTRSARLLGVQLTEGGAAEVAGRSRGTPRIANRLLRRVRDYAEVRADGV
CHHHHHHHHHHHHCCCEEEEEEECCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCH
VSREVARAALRIYDVDALGLDRLDRAVLDALVRRFGGGPVGLSTLAVAVGEEADTVEDVS
HHHHHHHHHHHHCCCCHHCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCHHHHHHH
EPFLLRAGLLIRTARGRVATPAAFTHLGLEPQSDQLGRSQAPAALFGEDLPAS
CHHHHHHHHHEEECCCCCCCCHHHHHCCCCCCHHHCCCCCCCHHHHCCCCCCC
>Mature Secondary Structure 
SGEGLVSAAAAPEEQAFEAGLRPKNLDEFVGQRKVREQLSIMLEGARGRGRPPDHVLLS
CCCCCEECCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEE
GPPGLGKTSLAMIIAEELGVPLRMTSGPAIERAGDLVAILTALTPGEVLFLDEIHRIARP
CCCCCCHHHHHHHHHHHCCCCEEECCCCCHHHHCCHHHHHHHCCCCCEEEHHHHHHHHCH
AEELLYAAMEDFRVDVVLGKGPGATAIPLDLAPFTLVGATTRSGLLTGPLRDRFGFTAHM
HHHHHHHHHHHCEEEEEEECCCCCCEEECCCCCEEEEECCCCCCCEECCHHHHCCCEEEC
DFYDAAELALVLTRSARLLGVQLTEGGAAEVAGRSRGTPRIANRLLRRVRDYAEVRADGV
CHHHHHHHHHHHHCCCEEEEEEECCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCH
VSREVARAALRIYDVDALGLDRLDRAVLDALVRRFGGGPVGLSTLAVAVGEEADTVEDVS
HHHHHHHHHHHHCCCCHHCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCHHHHHHH
EPFLLRAGLLIRTARGRVATPAAFTHLGLEPQSDQLGRSQAPAALFGEDLPAS
CHHHHHHHHHEEECCCCCCCCHHHHHCCCCCCHHHCCCCCCCHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA