| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158316810
Identifier: 158316810
GI number: 158316810
Start: 6051117
End: 6051554
Strand: Reverse
Name: 158316810
Synonym: Franean1_5052
Alternate gene names: NA
Gene position: 6051554-6051117 (Counterclockwise)
Preceding gene: 158316811
Following gene: 158316809
Centisome position: 67.37
GC content: 73.06
Gene sequence:
>438_bases GTGAGGCTCCTGTGCACCGGCGTCCGCGTCTGGCGCGAGCACCAGGCCGTGTGGCGGGACCTGGAGAAGGTCCGCCACCT CGCCCGGACCCGCGGCCAGAAGCTCACCCTCGTCCACGGCGACGCGGCCGGCGCCGACCGGCACGTCCGAGCCTGGTGCG AGCGCACTCCCGAGGTCGTTGAGAAGAAGTACCCAGTCTCCCCGACGATGTGGCGGATCAACGGCCCGCGTGCCGGGCAC CTGCGCAACGCCCACATGGTCAGCCTCGGCGCCGACGGGTGCATCGCGTACTGCGTGCCCTGCGACAAGCCGGGGCCGTG CCGCGGACTCGGCGGCGTGCTGCTCTGCCCGACGGGCACGCCACGCATGGCACCTACGGCTGCATGGAGCTGGCGAGGGC CGGCTGGCATCGAGGTGTGGGAGCGGTGGGCAGCGTGA
Upstream 100 bases:
>100_bases GTGACCGCCGGACTTCGCCGGACAGTCGCATGATCGTTGTCCTGCTGCCCTACGCCACCTGCGGCCTGATCGTCCGTCGC AGCCAGGTCCGGTGGGTGCT
Downstream 100 bases:
>100_bases GCCGTCCCGCTGCCAAGCTCACGCCTGCCCAGGTGGTGGAGATTCGGAAGCAGCTTGCCGCAGCAGCTTGCCGCGGGTGC GCGCAAGGGCGACCTGGCCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 145; Mature: 145
Protein sequence:
>145_residues MRLLCTGVRVWREHQAVWRDLEKVRHLARTRGQKLTLVHGDAAGADRHVRAWCERTPEVVEKKYPVSPTMWRINGPRAGH LRNAHMVSLGADGCIAYCVPCDKPGPCRGLGGVLLCPTGTPRMAPTAAWSWRGPAGIEVWERWAA
Sequences:
>Translated_145_residues MRLLCTGVRVWREHQAVWRDLEKVRHLARTRGQKLTLVHGDAAGADRHVRAWCERTPEVVEKKYPVSPTMWRINGPRAGH LRNAHMVSLGADGCIAYCVPCDKPGPCRGLGGVLLCPTGTPRMAPTAAWSWRGPAGIEVWERWAA >Mature_145_residues MRLLCTGVRVWREHQAVWRDLEKVRHLARTRGQKLTLVHGDAAGADRHVRAWCERTPEVVEKKYPVSPTMWRINGPRAGH LRNAHMVSLGADGCIAYCVPCDKPGPCRGLGGVLLCPTGTPRMAPTAAWSWRGPAGIEVWERWAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16168; Mature: 16168
Theoretical pI: Translated: 10.19; Mature: 10.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.8 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 7.6 %Cys+Met (Translated Protein) 4.8 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 7.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLLCTGVRVWREHQAVWRDLEKVRHLARTRGQKLTLVHGDAAGADRHVRAWCERTPEVV CCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHCCHHHH EKKYPVSPTMWRINGPRAGHLRNAHMVSLGADGCIAYCVPCDKPGPCRGLGGVLLCPTGT HHCCCCCCEEEEECCCCCCCCCCCEEEEECCCCEEEEEEECCCCCCCCCCCCEEECCCCC PRMAPTAAWSWRGPAGIEVWERWAA CCCCCCCCCCCCCCCCHHHHHHHCC >Mature Secondary Structure MRLLCTGVRVWREHQAVWRDLEKVRHLARTRGQKLTLVHGDAAGADRHVRAWCERTPEVV CCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHCCHHHH EKKYPVSPTMWRINGPRAGHLRNAHMVSLGADGCIAYCVPCDKPGPCRGLGGVLLCPTGT HHCCCCCCEEEEECCCCCCCCCCCEEEEECCCCEEEEEEECCCCCCCCCCCCEEECCCCC PRMAPTAAWSWRGPAGIEVWERWAA CCCCCCCCCCCCCCCCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA