| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158316811
Identifier: 158316811
GI number: 158316811
Start: 6051551
End: 6052051
Strand: Reverse
Name: 158316811
Synonym: Franean1_5053
Alternate gene names: NA
Gene position: 6052051-6051551 (Counterclockwise)
Preceding gene: 158316812
Following gene: 158316810
Centisome position: 67.38
GC content: 72.06
Gene sequence:
>501_bases GTGGGCCCACTACCTCGTGGAGCTGCACGACGAGCCCGCCCACGACACGCGGTACGCCAGGTTCTGCGCCAAGGTGGCGA CAAGCAACCGGGCCCAGGCCGCGTTCCCGCGTGCGCGTGCGTCATGACCGCTGACCTGAGCGTCCCCACCGGCGTGACGC GGCGTCGGGAGCCCGTCCGTCGCAGCGAGTGGCTGGCGTCCCCACGCGCCCCCGGCCCCTACTCGCTGCCGGTCGGCCAC ATTGTCGCCATCGAGATCACCGACGACGCGGCGCACCGGCAGTTAGGCATCGGCTACCGCTCGGCGGGCGAGCAGGTGTG GAGCTCCGGCTGGGGCTCGCACGTCGTCGAGGTGCTCGCCGAGGACGCCGCCGGCCGTGGCTGGTGGGTGGAGCACTGTG ACCGCCGGACTTCGCCGGACAGTCGCATGATCGTTGTCCTGCTGCCCTACGCCACCTGCGGCCTGATCGTCCGTCGCAGC CAGGTCCGGTGGGTGCTGTGA
Upstream 100 bases:
>100_bases GAGAAGAGGCGCTGACAATGAGCGAGATCCCGCCCCTGGACGAGTTCTCCCACGGCACCGTGACCCTGGCGGACGACCCT CCCCATCAGGTTGATCGGGA
Downstream 100 bases:
>100_bases GGCTCCTGTGCACCGGCGTCCGCGTCTGGCGCGAGCACCAGGCCGTGTGGCGGGACCTGGAGAAGGTCCGCCACCTCGCC CGGACCCGCGGCCAGAAGCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 166; Mature: 165
Protein sequence:
>166_residues MGPLPRGAARRARPRHAVRQVLRQGGDKQPGPGRVPACACVMTADLSVPTGVTRRREPVRRSEWLASPRAPGPYSLPVGH IVAIEITDDAAHRQLGIGYRSAGEQVWSSGWGSHVVEVLAEDAAGRGWWVEHCDRRTSPDSRMIVVLLPYATCGLIVRRS QVRWVL
Sequences:
>Translated_166_residues MGPLPRGAARRARPRHAVRQVLRQGGDKQPGPGRVPACACVMTADLSVPTGVTRRREPVRRSEWLASPRAPGPYSLPVGH IVAIEITDDAAHRQLGIGYRSAGEQVWSSGWGSHVVEVLAEDAAGRGWWVEHCDRRTSPDSRMIVVLLPYATCGLIVRRS QVRWVL >Mature_165_residues GPLPRGAARRARPRHAVRQVLRQGGDKQPGPGRVPACACVMTADLSVPTGVTRRREPVRRSEWLASPRAPGPYSLPVGHI VAIEITDDAAHRQLGIGYRSAGEQVWSSGWGSHVVEVLAEDAAGRGWWVEHCDRRTSPDSRMIVVLLPYATCGLIVRRSQ VRWVL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18225; Mature: 18094
Theoretical pI: Translated: 11.32; Mature: 11.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGPLPRGAARRARPRHAVRQVLRQGGDKQPGPGRVPACACVMTADLSVPTGVTRRREPVR CCCCCCCHHHCCCHHHHHHHHHHCCCCCCCCCCCCCHHEHEEECCCCCCCCCCHHCCCHH RSEWLASPRAPGPYSLPVGHIVAIEITDDAAHRQLGIGYRSAGEQVWSSGWGSHVVEVLA HHHHHCCCCCCCCCCCCCCCEEEEEECCCHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHH EDAAGRGWWVEHCDRRTSPDSRMIVVLLPYATCGLIVRRSQVRWVL HHCCCCCHHHHHHCCCCCCCCCEEEEEECCHHHHHHHHHCCCEECC >Mature Secondary Structure GPLPRGAARRARPRHAVRQVLRQGGDKQPGPGRVPACACVMTADLSVPTGVTRRREPVR CCCCCCHHHCCCHHHHHHHHHHCCCCCCCCCCCCCHHEHEEECCCCCCCCCCHHCCCHH RSEWLASPRAPGPYSLPVGHIVAIEITDDAAHRQLGIGYRSAGEQVWSSGWGSHVVEVLA HHHHHCCCCCCCCCCCCCCCEEEEEECCCHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHH EDAAGRGWWVEHCDRRTSPDSRMIVVLLPYATCGLIVRRSQVRWVL HHCCCCCHHHHHHCCCCCCCCCEEEEEECCHHHHHHHHHCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA