Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

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The map label for this gene is 158316809

Identifier: 158316809

GI number: 158316809

Start: 6050538

End: 6051062

Strand: Reverse

Name: 158316809

Synonym: Franean1_5051

Alternate gene names: NA

Gene position: 6051062-6050538 (Counterclockwise)

Preceding gene: 158316810

Following gene: 158316807

Centisome position: 67.37

GC content: 68.0

Gene sequence:

>525_bases
TTGCCGCAGCAGCTTGCCGCGGGTGCGCGCAAGGGCGACCTGGCCGCCCAGTACCAGGTCTCGGGCGAAGCGATCCGCAA
GATCAGGCGCGGGCGCACCTGGCGGACCCTCGACGACGTCGCACGAACCCACTGCCGACGCAACCACTCGTATGCCGAGC
ACGGCTACACCAGGTCGCAGGGGAAGAGGCGCTGCCGTAAGTGCCGCAGGGAGTACGAGCGCGGCTTGCGACTGACCCGC
GAGGAGTACCTCGACGAGCACGCCGGGCACGAGCTGCGTACCCGTGTTAACGGGACTGTCTACTGCCTTGCCTGTTGGCG
CGGAGAGAGCGACATCGACGAAGTCGCCGTCGAGCGGGCCATTGCTGGCGAGCCGCCGGAGCGCATGAGCATCGCTGAGC
GACACCATGCGATCCGGCGGCTACACGGCAAGGGACCTTCGGCTCGGGAGATCGCTCGACGCCTGAGTATCAGCTCGCGC
ACCGTCCAGCGACATGTGGCCCTGATCCGCGAGGCAGCGGCATGA

Upstream 100 bases:

>100_bases
GCGAGGGCCGGCTGGCATCGAGGTGTGGGAGCGGTGGGCAGCGTGAGCCGTCCCGCTGCCAAGCTCACGCCTGCCCAGGT
GGTGGAGATTCGGAAGCAGC

Downstream 100 bases:

>100_bases
AACGCCCTATCCGCTGCGACCCACCGCCTGGCTCTTCGTCCTGTCCAAGGGTCGCGTGAACATCGAGGTCAGCCTGTGGC
CCGATGGCGACGAGCGGACA

Product: LuxR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 174; Mature: 173

Protein sequence:

>174_residues
MPQQLAAGARKGDLAAQYQVSGEAIRKIRRGRTWRTLDDVARTHCRRNHSYAEHGYTRSQGKRRCRKCRREYERGLRLTR
EEYLDEHAGHELRTRVNGTVYCLACWRGESDIDEVAVERAIAGEPPERMSIAERHHAIRRLHGKGPSAREIARRLSISSR
TVQRHVALIREAAA

Sequences:

>Translated_174_residues
MPQQLAAGARKGDLAAQYQVSGEAIRKIRRGRTWRTLDDVARTHCRRNHSYAEHGYTRSQGKRRCRKCRREYERGLRLTR
EEYLDEHAGHELRTRVNGTVYCLACWRGESDIDEVAVERAIAGEPPERMSIAERHHAIRRLHGKGPSAREIARRLSISSR
TVQRHVALIREAAA
>Mature_173_residues
PQQLAAGARKGDLAAQYQVSGEAIRKIRRGRTWRTLDDVARTHCRRNHSYAEHGYTRSQGKRRCRKCRREYERGLRLTRE
EYLDEHAGHELRTRVNGTVYCLACWRGESDIDEVAVERAIAGEPPERMSIAERHHAIRRLHGKGPSAREIARRLSISSRT
VQRHVALIREAAA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20046; Mature: 19915

Theoretical pI: Translated: 10.94; Mature: 10.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPQQLAAGARKGDLAAQYQVSGEAIRKIRRGRTWRTLDDVARTHCRRNHSYAEHGYTRSQ
CCCHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHCCCHHH
GKRRCRKCRREYERGLRLTREEYLDEHAGHELRTRVNGTVYCLACWRGESDIDEVAVERA
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCEEEEEEEECCCCCHHHHHHHHH
IAGEPPERMSIAERHHAIRRLHGKGPSAREIARRLSISSRTVQRHVALIREAAA
HCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
PQQLAAGARKGDLAAQYQVSGEAIRKIRRGRTWRTLDDVARTHCRRNHSYAEHGYTRSQ
CCHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHCCCHHH
GKRRCRKCRREYERGLRLTREEYLDEHAGHELRTRVNGTVYCLACWRGESDIDEVAVERA
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCEEEEEEEECCCCCHHHHHHHHH
IAGEPPERMSIAERHHAIRRLHGKGPSAREIARRLSISSRTVQRHVALIREAAA
HCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA