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The map label for this gene is ssb [H]

Identifier: 158316807

GI number: 158316807

Start: 6048662

End: 6049177

Strand: Reverse

Name: ssb [H]

Synonym: Franean1_5049

Alternate gene names: 158316807

Gene position: 6049177-6048662 (Counterclockwise)

Preceding gene: 158316809

Following gene: 158316806

Centisome position: 67.35

GC content: 69.38

Gene sequence:

>516_bases
ATGACCGGAGAACCGATTCTGACTGTTATTGGCCAGCTCGCAAGCGACCCTGAGCTGCGTTTCACCCCGAACGGCGCCGC
GGTCGCCAGCTTCACCATCGCCTCCACCCCGCGCATCTACGACAAGCAGGCGAACGAGTGGAAGGACGGGCAGGCGCTGT
TCCTGCGCTGCTCAATCTGGCGGCAGGCCGCCGAGAATGTCGCCGAGTCGCTGACCAAGGGCACCCGGGTGATCGCGCAG
GGCCGGCTGAAGCAGCGCTCGTTCGAGACCAAGGAAGGGGAGAAGCGCACCGTCATCGAGCTGGAGGTCGACGAGATCGG
CCCCTCGCTCGGTACGCCACCACCAAGGTCACGAAGACCGAACGCGGCCAGGGCGGCTCGAATGGGCGCGGCGGCCAGCA
GCAGGCAGGCCAGGCCGGCGGCGGCTCCGGCTCCGGCTCCGGTCAGGGTGGCGCGGTCGACGACCCGTGGTCCCAGCCCG
CGGGCGGCTACGCCGACGAGCCGCCGTTCTAGGTAG

Upstream 100 bases:

>100_bases
GATCACCTTGGAGTAAGCCTTCCGCGCCTTTACCGATCATTTGACGAACTTGGACTTCCTCGACGCCCAGTAGGTCGACC
GCCGAGAAAGGTTGCGTGAC

Downstream 100 bases:

>100_bases
TCCGCGCCAGGGGGCCGTGACAGCCTTGCCGGCGGCGGCCCCCTGGTTCACCCCTCTGACCAGAAGGAGACCGCCATGCC
CACACTCACGCACAGGGAGC

Product: single-strand binding protein

Products: NA

Alternate protein names: SSB; Helix-destabilizing protein [H]

Number of amino acids: Translated: 171; Mature: 170

Protein sequence:

>171_residues
MTGEPILTVIGQLASDPELRFTPNGAAVASFTIASTPRIYDKQANEWKDGQALFLRCSIWRQAAENVAESLTKGTRVIAQ
GRLKQRSFETKEGEKRTVIELEVDEIGPSLGTPPPRSRRPNAARAARMGAAASSRQARPAAAPAPAPVRVARSTTRGPSP
RAATPTSRRSR

Sequences:

>Translated_171_residues
MTGEPILTVIGQLASDPELRFTPNGAAVASFTIASTPRIYDKQANEWKDGQALFLRCSIWRQAAENVAESLTKGTRVIAQ
GRLKQRSFETKEGEKRTVIELEVDEIGPSLGTPPPRSRRPNAARAARMGAAASSRQARPAAAPAPAPVRVARSTTRGPSP
RAATPTSRRSR
>Mature_170_residues
TGEPILTVIGQLASDPELRFTPNGAAVASFTIASTPRIYDKQANEWKDGQALFLRCSIWRQAAENVAESLTKGTRVIAQG
RLKQRSFETKEGEKRTVIELEVDEIGPSLGTPPPRSRRPNAARAARMGAAASSRQARPAAAPAPAPVRVARSTTRGPSPR
AATPTSRRSR

Specific function: This protein is essential for replication of the chromosome. It is also involved in DNA recombination and repair [H]

COG id: COG0629

COG function: function code L; Single-stranded DNA-binding protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SSB domain [H]

Homologues:

Organism=Escherichia coli, GI1790494, Length=98, Percent_Identity=34.6938775510204, Blast_Score=68, Evalue=4e-13,

Paralogues:

None

Copy number: 1622 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 2,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR000424
- InterPro:   IPR011344 [H]

Pfam domain/function: PF00436 SSB [H]

EC number: NA

Molecular weight: Translated: 18399; Mature: 18268

Theoretical pI: Translated: 11.90; Mature: 11.90

Prosite motif: PS50935 SSB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTGEPILTVIGQLASDPELRFTPNGAAVASFTIASTPRIYDKQANEWKDGQALFLRCSIW
CCCCHHHHHHHHHCCCCCEEECCCCCEEEEEEECCCCCHHCCCCCCCCCCCEEEEHHHHH
RQAAENVAESLTKGTRVIAQGRLKQRSFETKEGEKRTVIELEVDEIGPSLGTPPPRSRRP
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEHHHCCCCCCCCCCCCCCC
NAARAARMGAAASSRQARPAAAPAPAPVRVARSTTRGPSPRAATPTSRRSR
CHHHHHHHCCCCCCCCCCCCCCCCCCCEEEHHCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TGEPILTVIGQLASDPELRFTPNGAAVASFTIASTPRIYDKQANEWKDGQALFLRCSIW
CCCHHHHHHHHHCCCCCEEECCCCCEEEEEEECCCCCHHCCCCCCCCCCCEEEEHHHHH
RQAAENVAESLTKGTRVIAQGRLKQRSFETKEGEKRTVIELEVDEIGPSLGTPPPRSRRP
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEHHHCCCCCCCCCCCCCCC
NAARAARMGAAASSRQARPAAAPAPAPVRVARSTTRGPSPRAATPTSRRSR
CHHHHHHHCCCCCCCCCCCCCCCCCCCEEEHHCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA