Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

Click here to switch to the map view.

The map label for this gene is 158316806

Identifier: 158316806

GI number: 158316806

Start: 6048129

End: 6048557

Strand: Reverse

Name: 158316806

Synonym: Franean1_5048

Alternate gene names: NA

Gene position: 6048557-6048129 (Counterclockwise)

Preceding gene: 158316807

Following gene: 158316805

Centisome position: 67.34

GC content: 72.73

Gene sequence:

>429_bases
ATGGCCCGCCCTGACGACGTCACCGACGACCCGCGCGCCATCCGCGTGCTTCGGCGCCACGGAGCGCCCGGCGAAGAGAC
CGAGCAGCTCAGCGACGCGTTCGGCCATCCGTTCGTCCCCAACACCGAGCTCGCGCCCGGCGACTGGGCCGTCCACTGGA
TGGACGACTCGGGCGAGGTCACCGGGGTGACCGAGGCGATGCCGTCCAGCTTCGGCACGCCGCTGCTGCGCCAGCATCTG
AGGACTGCGGACGGCCGGGCCGTCTCCAGGCCGGTCGCGCACAGCGGCTCCACGACCATCTGCACCCACAACCCGCATTG
CGACCCCTACGACCACGGAGAGATCGCCCGGCTGACCGGGCAGCCCACGTCAGGTGCGAGCCCGTTCCTGCCGTCGATGA
GCCCGCGGGCGCGGCGGGCGGAGACGTGA

Upstream 100 bases:

>100_bases
CGCCAGGGGGCCGTGACAGCCTTGCCGGCGGCGGCCCCCTGGTTCACCCCTCTGACCAGAAGGAGACCGCCATGCCCACA
CTCACGCACAGGGAGCGGTG

Downstream 100 bases:

>100_bases
CGGACTCCCGCGCCGCACTCGACGAGCTCGCCGCCCTCTCGGTGGGGGCAGGTAGCCCGCAGGAAGGCCACGAGCCGACC
CACTATTTCTCCCACCGCTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 142; Mature: 141

Protein sequence:

>142_residues
MARPDDVTDDPRAIRVLRRHGAPGEETEQLSDAFGHPFVPNTELAPGDWAVHWMDDSGEVTGVTEAMPSSFGTPLLRQHL
RTADGRAVSRPVAHSGSTTICTHNPHCDPYDHGEIARLTGQPTSGASPFLPSMSPRARRAET

Sequences:

>Translated_142_residues
MARPDDVTDDPRAIRVLRRHGAPGEETEQLSDAFGHPFVPNTELAPGDWAVHWMDDSGEVTGVTEAMPSSFGTPLLRQHL
RTADGRAVSRPVAHSGSTTICTHNPHCDPYDHGEIARLTGQPTSGASPFLPSMSPRARRAET
>Mature_141_residues
ARPDDVTDDPRAIRVLRRHGAPGEETEQLSDAFGHPFVPNTELAPGDWAVHWMDDSGEVTGVTEAMPSSFGTPLLRQHLR
TADGRAVSRPVAHSGSTTICTHNPHCDPYDHGEIARLTGQPTSGASPFLPSMSPRARRAET

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15359; Mature: 15228

Theoretical pI: Translated: 6.07; Mature: 6.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARPDDVTDDPRAIRVLRRHGAPGEETEQLSDAFGHPFVPNTELAPGDWAVHWMDDSGEV
CCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCE
TGVTEAMPSSFGTPLLRQHLRTADGRAVSRPVAHSGSTTICTHNPHCDPYDHGEIARLTG
ECHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCEEEECC
QPTSGASPFLPSMSPRARRAET
CCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
ARPDDVTDDPRAIRVLRRHGAPGEETEQLSDAFGHPFVPNTELAPGDWAVHWMDDSGEV
CCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCE
TGVTEAMPSSFGTPLLRQHLRTADGRAVSRPVAHSGSTTICTHNPHCDPYDHGEIARLTG
ECHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCEEEECC
QPTSGASPFLPSMSPRARRAET
CCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA