| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158316750
Identifier: 158316750
GI number: 158316750
Start: 5984014
End: 5984277
Strand: Reverse
Name: 158316750
Synonym: Franean1_4988
Alternate gene names: NA
Gene position: 5984277-5984014 (Counterclockwise)
Preceding gene: 158316751
Following gene: 158316749
Centisome position: 66.62
GC content: 68.56
Gene sequence:
>264_bases GTGGCAGGGACGATCGCCGACGTCAAGGCGCAGCTCGACGAGGCGTTCCGGCGGACGGAAGATGTGACGGGCCAGCTCGA GGGCGCGCTCAACATGATCGAGGAAGCGCAGGCGATGGTCGTGGCGGCCACCGACGGCAGTGAGCACCTCGCCGTCGAGC AGCTCACCAGTGCGCTGGTCGAGACCAGGGACAGCCTGGAGAACGCGCTCGCCGCGCTCGGCAACGCCGTCCAGGAGGTC AAGGTCTACCGCGACGGTCTGTGA
Upstream 100 bases:
>100_bases GGCAGCCCGCGCCGGTGCGGGGACCAGCCGGTGCGGGGACCAGCCGGTGAGAGGACCCAGCCGGTGAGAGGACCCAGTCG GTCAACGAACGGAGTGCACG
Downstream 100 bases:
>100_bases CCGGTGGCGTACCACCGGCCCGGATCCGGCGTGGTGTCGGACACACTGCCGGTGGGACCGGTGTCGGCGGGGGAGAACCG CGGCGCGCGGTGCGGCCGGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 87; Mature: 86
Protein sequence:
>87_residues MAGTIADVKAQLDEAFRRTEDVTGQLEGALNMIEEAQAMVVAATDGSEHLAVEQLTSALVETRDSLENALAALGNAVQEV KVYRDGL
Sequences:
>Translated_87_residues MAGTIADVKAQLDEAFRRTEDVTGQLEGALNMIEEAQAMVVAATDGSEHLAVEQLTSALVETRDSLENALAALGNAVQEV KVYRDGL >Mature_86_residues AGTIADVKAQLDEAFRRTEDVTGQLEGALNMIEEAQAMVVAATDGSEHLAVEQLTSALVETRDSLENALAALGNAVQEVK VYRDGL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9231; Mature: 9100
Theoretical pI: Translated: 3.95; Mature: 3.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGTIADVKAQLDEAFRRTEDVTGQLEGALNMIEEAQAMVVAATDGSEHLAVEQLTSALV CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHHH ETRDSLENALAALGNAVQEVKVYRDGL HHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure AGTIADVKAQLDEAFRRTEDVTGQLEGALNMIEEAQAMVVAATDGSEHLAVEQLTSALV CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHHH ETRDSLENALAALGNAVQEVKVYRDGL HHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA