| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158316751
Identifier: 158316751
GI number: 158316751
Start: 5984389
End: 5985705
Strand: Reverse
Name: 158316751
Synonym: Franean1_4989
Alternate gene names: NA
Gene position: 5985705-5984389 (Counterclockwise)
Preceding gene: 158316752
Following gene: 158316750
Centisome position: 66.64
GC content: 79.04
Gene sequence:
>1317_bases GTGAGTGATCCGCCCGAGGCGGGGAATGCGCGGAGGGTGGCTGATCCATATGGACTCTCGACGGGTCCCGACGCTGCCGG GGCGGGTGCCAGCGGCGGGCTGGGGCCTCCCGACCCCGGCTCCGGTCCCGATCCCAACCTCGGCCACGGGCGGGGGAACG GGAGCGTGAGCGGCGGCGGGAGCGCCCCGGGGGCGGGCGGGACGATCGGCTCCGGCCTCGCCGAGATCCCGGAGGGGCCG CTCGTGCCGACCATGCCCTCAGGCGCCACCGCTCCCACCTCCCGGTCCGGCTCCGCCGCGGCCGTGCCGCCCCGGCCCGG CGCGTTCGTGCCGCGGGAGCTCGACCATCCGCTGGTAGCGGCCAACCGGTACCGGGAGCTGATGGGGGCCTCCGACGCGG TGCGGGCCCGGCTGGCAGAGAGCCTCGCCGCCCGCCAGGAGGGGCACGACGTGATCGCCCGCCGGCACCGCTCGGCAGCC GACGACATCCGCACACGCATCGGAGTCGTCTGGGGGAGCGTCGGCGGGTCGCTGGCCCCGCACGGCCTGGGCGAGCTCGA CCAGGTGCGCCCCCGCAGGGGCGAGGGGCCCGACCTCGAGGCCGTCTACCAGCGGTACGCCGGCGATCTGGACGGGCTCG ACCGCGGCCGCGGCGGCCGTCCCACGGCTGTGACGATCGACGCGGCGGGCGGCCGCCGCGCGGCGCGCGGCGCGCGGGCC CGCGGTGTCGACGAGCAGCCCTCCATGGGCCAGCGCGGCGGGAAGCGGCTCGGCGCGGCGTCCGGCGGCCAGCTGTCCGG CCGTGGGTCCCGCGGCCGGGCGCCGGCTGCCGACGGCCTGGTCGGCGCCGACGGCCTGGTCGACCCGGAGCGGGCGAAGA AGCTGGCCTACCGGCTGTGCCTGGAGGTGATGGCCCGCTCCGCCGAGCTGCGCGCGGTGACGAAGGGCGCCTCCGGGATG TCCGCGGGGCTGGTCACCGCCCTGTGCTGCGCGCTCGGCGGCGCGCTGACGGTGGCGGCCCGGGTGTTCGTGGCGGCGCC GGCCCTGCCGTGCCTCGCCGCGGCCGGGGGAGTGGGCGCGATCGCGGTGGTCGCGGCCACCGGCTCGTCCGCGGCGGCCG CGGTGCGCAGTGCCCTGCTCGCCGCGGCGTCGGCGGCGGTCGCCGTCTTCGCCACGTTCGGTTTCGTGCCCATCGAGCCG GCGGGGGCCATCGGCTCGCTGGCCGTGCTCGCGCTCGCGCTGCGGTTCGGGCTGGGCTTCGGCGCGGTCACCGGCTCGTC CAAACCCACCGGCCAGGGCGGATCCGGGCGGCGCTGA
Upstream 100 bases:
>100_bases CCCAGGCCGAGCCGCGCACCGTCGTCCCGTTCGCCCCGCTCGGCACGGGGTCGGCGACCGAGAGCGGAGCGGCGGTGTGA GCGGCGCGCGCCGGCGTGGG
Downstream 100 bases:
>100_bases GGCCGGGGCCGGGCAGCCCGCGCCGGTGCGGGGACCAGCCGGTGCGGGGACCAGCCGGTGAGAGGACCCAGCCGGTGAGA GGACCCAGTCGGTCAACGAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 438; Mature: 437
Protein sequence:
>438_residues MSDPPEAGNARRVADPYGLSTGPDAAGAGASGGLGPPDPGSGPDPNLGHGRGNGSVSGGGSAPGAGGTIGSGLAEIPEGP LVPTMPSGATAPTSRSGSAAAVPPRPGAFVPRELDHPLVAANRYRELMGASDAVRARLAESLAARQEGHDVIARRHRSAA DDIRTRIGVVWGSVGGSLAPHGLGELDQVRPRRGEGPDLEAVYQRYAGDLDGLDRGRGGRPTAVTIDAAGGRRAARGARA RGVDEQPSMGQRGGKRLGAASGGQLSGRGSRGRAPAADGLVGADGLVDPERAKKLAYRLCLEVMARSAELRAVTKGASGM SAGLVTALCCALGGALTVAARVFVAAPALPCLAAAGGVGAIAVVAATGSSAAAAVRSALLAAASAAVAVFATFGFVPIEP AGAIGSLAVLALALRFGLGFGAVTGSSKPTGQGGSGRR
Sequences:
>Translated_438_residues MSDPPEAGNARRVADPYGLSTGPDAAGAGASGGLGPPDPGSGPDPNLGHGRGNGSVSGGGSAPGAGGTIGSGLAEIPEGP LVPTMPSGATAPTSRSGSAAAVPPRPGAFVPRELDHPLVAANRYRELMGASDAVRARLAESLAARQEGHDVIARRHRSAA DDIRTRIGVVWGSVGGSLAPHGLGELDQVRPRRGEGPDLEAVYQRYAGDLDGLDRGRGGRPTAVTIDAAGGRRAARGARA RGVDEQPSMGQRGGKRLGAASGGQLSGRGSRGRAPAADGLVGADGLVDPERAKKLAYRLCLEVMARSAELRAVTKGASGM SAGLVTALCCALGGALTVAARVFVAAPALPCLAAAGGVGAIAVVAATGSSAAAAVRSALLAAASAAVAVFATFGFVPIEP AGAIGSLAVLALALRFGLGFGAVTGSSKPTGQGGSGRR >Mature_437_residues SDPPEAGNARRVADPYGLSTGPDAAGAGASGGLGPPDPGSGPDPNLGHGRGNGSVSGGGSAPGAGGTIGSGLAEIPEGPL VPTMPSGATAPTSRSGSAAAVPPRPGAFVPRELDHPLVAANRYRELMGASDAVRARLAESLAARQEGHDVIARRHRSAAD DIRTRIGVVWGSVGGSLAPHGLGELDQVRPRRGEGPDLEAVYQRYAGDLDGLDRGRGGRPTAVTIDAAGGRRAARGARAR GVDEQPSMGQRGGKRLGAASGGQLSGRGSRGRAPAADGLVGADGLVDPERAKKLAYRLCLEVMARSAELRAVTKGASGMS AGLVTALCCALGGALTVAARVFVAAPALPCLAAAGGVGAIAVVAATGSSAAAAVRSALLAAASAAVAVFATFGFVPIEPA GAIGSLAVLALALRFGLGFGAVTGSSKPTGQGGSGRR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42810; Mature: 42678
Theoretical pI: Translated: 10.73; Mature: 10.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDPPEAGNARRVADPYGLSTGPDAAGAGASGGLGPPDPGSGPDPNLGHGRGNGSVSGGG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC SAPGAGGTIGSGLAEIPEGPLVPTMPSGATAPTSRSGSAAAVPPRPGAFVPRELDHPLVA CCCCCCCCHHCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCHHH ANRYRELMGASDAVRARLAESLAARQEGHDVIARRHRSAADDIRTRIGVVWGSVGGSLAP HHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC HGLGELDQVRPRRGEGPDLEAVYQRYAGDLDGLDRGRGGRPTAVTIDAAGGRRAARGARA CCCCCHHHHCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCHHHCCHHH RGVDEQPSMGQRGGKRLGAASGGQLSGRGSRGRAPAADGLVGADGLVDPERAKKLAYRLC CCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH LEVMARSAELRAVTKGASGMSAGLVTALCCALGGALTVAARVFVAAPALPCLAAAGGVGA HHHHHCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCE IAVVAATGSSAAAAVRSALLAAASAAVAVFATFGFVPIEPAGAIGSLAVLALALRFGLGF EEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCC GAVTGSSKPTGQGGSGRR CCCCCCCCCCCCCCCCCC >Mature Secondary Structure SDPPEAGNARRVADPYGLSTGPDAAGAGASGGLGPPDPGSGPDPNLGHGRGNGSVSGGG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC SAPGAGGTIGSGLAEIPEGPLVPTMPSGATAPTSRSGSAAAVPPRPGAFVPRELDHPLVA CCCCCCCCHHCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCHHH ANRYRELMGASDAVRARLAESLAARQEGHDVIARRHRSAADDIRTRIGVVWGSVGGSLAP HHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC HGLGELDQVRPRRGEGPDLEAVYQRYAGDLDGLDRGRGGRPTAVTIDAAGGRRAARGARA CCCCCHHHHCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCHHHCCHHH RGVDEQPSMGQRGGKRLGAASGGQLSGRGSRGRAPAADGLVGADGLVDPERAKKLAYRLC CCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH LEVMARSAELRAVTKGASGMSAGLVTALCCALGGALTVAARVFVAAPALPCLAAAGGVGA HHHHHCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCE IAVVAATGSSAAAAVRSALLAAASAAVAVFATFGFVPIEPAGAIGSLAVLALALRFGLGF EEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCC GAVTGSSKPTGQGGSGRR CCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA