| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
Click here to switch to the map view.
The map label for this gene is 158316748
Identifier: 158316748
GI number: 158316748
Start: 5981819
End: 5982061
Strand: Reverse
Name: 158316748
Synonym: Franean1_4986
Alternate gene names: NA
Gene position: 5982061-5981819 (Counterclockwise)
Preceding gene: 158316749
Following gene: 158316747
Centisome position: 66.6
GC content: 65.02
Gene sequence:
>243_bases ATGGTTACCGTGGACGACACGGTTACCGCAGACCACAAGACAGGAGTGGACGTGTCGGAGACCGGTCATGTGAAGGCCAA CGTGGGGTCCTGGGCGGCGGTGTACATCCTCATCGCCGGCTTCGTCCTCGGGACCCTCGCGCTGATCCTCGGTTCGGTGC CCCTGTGGATCGCCACCGGTGTGGCGATCGTCGCGGGTGCCGCCATCGGCCTGGCCTCCAACATCATGGAGCAGGCGTAC TGA
Upstream 100 bases:
>100_bases ACGTCCGGCGATGGCTCAACGACCAACTGGCGGATCTGCGTCACCTGGCTGGATTCTCCTGAGACGTTCCCGGGCGGGTA CGCTCGGCGGGAGGTCGGGC
Downstream 100 bases:
>100_bases GCGCGGCGCGCCTCTGGTTCAACCAGACCTGGCGCGGCACCTACCAGCTCATCGGGCTGCTGCGGGACGGAGCCGGCCCC GGCCGGCTGACGGTGCTCGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 80; Mature: 80
Protein sequence:
>80_residues MVTVDDTVTADHKTGVDVSETGHVKANVGSWAAVYILIAGFVLGTLALILGSVPLWIATGVAIVAGAAIGLASNIMEQAY
Sequences:
>Translated_80_residues MVTVDDTVTADHKTGVDVSETGHVKANVGSWAAVYILIAGFVLGTLALILGSVPLWIATGVAIVAGAAIGLASNIMEQAY >Mature_80_residues MVTVDDTVTADHKTGVDVSETGHVKANVGSWAAVYILIAGFVLGTLALILGSVPLWIATGVAIVAGAAIGLASNIMEQAY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8096; Mature: 8096
Theoretical pI: Translated: 4.32; Mature: 4.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVTVDDTVTADHKTGVDVSETGHVKANVGSWAAVYILIAGFVLGTLALILGSVPLWIATG CCCCCCCCCCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH VAIVAGAAIGLASNIMEQAY HHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MVTVDDTVTADHKTGVDVSETGHVKANVGSWAAVYILIAGFVLGTLALILGSVPLWIATG CCCCCCCCCCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH VAIVAGAAIGLASNIMEQAY HHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA