| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158316747
Identifier: 158316747
GI number: 158316747
Start: 5980635
End: 5981822
Strand: Reverse
Name: 158316747
Synonym: Franean1_4985
Alternate gene names: NA
Gene position: 5981822-5980635 (Counterclockwise)
Preceding gene: 158316748
Following gene: 158316742
Centisome position: 66.6
GC content: 74.58
Gene sequence:
>1188_bases CTGAGCGCGGCGCGCCTCTGGTTCAACCAGACCTGGCGCGGCACCTACCAGCTCATCGGGCTGCTGCGGGACGGAGCCGG CCCCGGCCGGCTGACGGTGCTCGGTTCCCACCAGATCCCGAGCACCCCGTTCCTGCAGGCCTGCGACGCCGTCATCGACG AGCCACCGGGCGAGGGCGACGAGTTCGTCGAGCAGGCACTGGCGGCGTGCCGCCGGCACGGGATCGACGTGTTCGTCCCC GGGCGCAACATGTTGGACGTCGCCGCCCGGGTCGGCGAGTTCGAGGCCGCCGGAGTGCGGGTCATGTGCTCCCCAGCCGC CTCGGCGCGGATCTTCACTACCAAGTCCGGGCAGTACGCGGCGATGGCGGCCCGTGGCCTGCCGGTGCCCCACACCCGGA CGGTGACAACCTTCGCGGAGTTCGAGGCCGCCTGCGACGAGCTGTCGGCCGCGGGCTGCACGGTCTGCGTCAAACCGGAC GTCGACCACGGCGGCCAGGGCTTCCGGATCATCGACGGGGACGCCGAGCGCCTGACGGCGCTGTTCGAGCCGCCGTCGGT GCGGGTCAGCCCCGCCACCATGGAACGCATCCTCGGCCGGGCCGGCAGCTTCCCCGCCCTCGTCGTGGGCGAGTTCCTGG ACGGGCCGGAGTTCAGCGTCGACGTGCTCTCCCGCCCCGCTCCCGGCACGAGCCCCGCTCCCGGGGCGGGCCCGGTGGCG ATGCCCGGCAGTGTCCTGGCGGCGGTGCCGCGGGGCAAGGACGGCCTGCCCTGGACCCGCAACCTGCGGGCGGACGCGGC CGTGACGGAGCTCGCCACCCGCGTCGTCGAGGAGTTCGGGTTGGCGTACCTGAACAACGTCCAGGTCCGCTACCGCAGAG CCACGCCGGTGCTGCTCGAGGTCAACACGCGGGCCGCCTCCGGGACCTACCAGTCGGCGGCGGCCGGGCTGAACCTGCCC TGGCTCGCGCTCGCGCTCCTGCTCGGGGAGCCGGTAGAGGTGGGCTCGCCGGACCTCCCGCAGACGCTCATCGCCTACAA CGAGGCGATGGTCATGCGCCCGCTCGACCGCCTCTCGCCGCGCCCGCGTGGTCACGGCGTGGCCCGGGACGCCGCCCGTC GGCTGGGCTCGGCCGCCGGCCGGGTGCACCGCCGCAGCACCGGCCCCGACCGAGCCCAACCCGCCTGA
Upstream 100 bases:
>100_bases CGCTGATCCTCGGTTCGGTGCCCCTGTGGATCGCCACCGGTGTGGCGATCGTCGCGGGTGCCGCCATCGGCCTGGCCTCC AACATCATGGAGCAGGCGTA
Downstream 100 bases:
>100_bases CGGCCCGGCCGGCCCCCTGCTGGTGCCAGTCGCTTGCCGGTGCCAGTCGTTCCCTGGCGGCTCAGTCGTCCGCCGGGTCC CCGGGGGTGCCGGCGGACGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 395; Mature: 394
Protein sequence:
>395_residues MSAARLWFNQTWRGTYQLIGLLRDGAGPGRLTVLGSHQIPSTPFLQACDAVIDEPPGEGDEFVEQALAACRRHGIDVFVP GRNMLDVAARVGEFEAAGVRVMCSPAASARIFTTKSGQYAAMAARGLPVPHTRTVTTFAEFEAACDELSAAGCTVCVKPD VDHGGQGFRIIDGDAERLTALFEPPSVRVSPATMERILGRAGSFPALVVGEFLDGPEFSVDVLSRPAPGTSPAPGAGPVA MPGSVLAAVPRGKDGLPWTRNLRADAAVTELATRVVEEFGLAYLNNVQVRYRRATPVLLEVNTRAASGTYQSAAAGLNLP WLALALLLGEPVEVGSPDLPQTLIAYNEAMVMRPLDRLSPRPRGHGVARDAARRLGSAAGRVHRRSTGPDRAQPA
Sequences:
>Translated_395_residues MSAARLWFNQTWRGTYQLIGLLRDGAGPGRLTVLGSHQIPSTPFLQACDAVIDEPPGEGDEFVEQALAACRRHGIDVFVP GRNMLDVAARVGEFEAAGVRVMCSPAASARIFTTKSGQYAAMAARGLPVPHTRTVTTFAEFEAACDELSAAGCTVCVKPD VDHGGQGFRIIDGDAERLTALFEPPSVRVSPATMERILGRAGSFPALVVGEFLDGPEFSVDVLSRPAPGTSPAPGAGPVA MPGSVLAAVPRGKDGLPWTRNLRADAAVTELATRVVEEFGLAYLNNVQVRYRRATPVLLEVNTRAASGTYQSAAAGLNLP WLALALLLGEPVEVGSPDLPQTLIAYNEAMVMRPLDRLSPRPRGHGVARDAARRLGSAAGRVHRRSTGPDRAQPA >Mature_394_residues SAARLWFNQTWRGTYQLIGLLRDGAGPGRLTVLGSHQIPSTPFLQACDAVIDEPPGEGDEFVEQALAACRRHGIDVFVPG RNMLDVAARVGEFEAAGVRVMCSPAASARIFTTKSGQYAAMAARGLPVPHTRTVTTFAEFEAACDELSAAGCTVCVKPDV DHGGQGFRIIDGDAERLTALFEPPSVRVSPATMERILGRAGSFPALVVGEFLDGPEFSVDVLSRPAPGTSPAPGAGPVAM PGSVLAAVPRGKDGLPWTRNLRADAAVTELATRVVEEFGLAYLNNVQVRYRRATPVLLEVNTRAASGTYQSAAAGLNLPW LALALLLGEPVEVGSPDLPQTLIAYNEAMVMRPLDRLSPRPRGHGVARDAARRLGSAAGRVHRRSTGPDRAQPA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41800; Mature: 41669
Theoretical pI: Translated: 7.47; Mature: 7.47
Prosite motif: PS50975 ATP_GRASP ; PS00867 CPSASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAARLWFNQTWRGTYQLIGLLRDGAGPGRLTVLGSHQIPSTPFLQACDAVIDEPPGEGD CCCCCEECCCCCCHHHHHHHHHHCCCCCCEEEEEECCCCCCCHHHHHHHHHHCCCCCCHH EFVEQALAACRRHGIDVFVPGRNMLDVAARVGEFEAAGVRVMCSPAASARIFTTKSGQYA HHHHHHHHHHHHCCCEEEECCCCHHHHHHHHCCCCCCCEEEEECCCCCEEEEEECCCCEE AMAARGLPVPHTRTVTTFAEFEAACDELSAAGCTVCVKPDVDHGGQGFRIIDGDAERLTA EHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCEEEEECCCHHHHHE LFEPPSVRVSPATMERILGRAGSFPALVVGEFLDGPEFSVDVLSRPAPGTSPAPGAGPVA EECCCCCEECHHHHHHHHHCCCCCCHHHHHHHCCCCCCCHHHHCCCCCCCCCCCCCCCCC MPGSVLAAVPRGKDGLPWTRNLRADAAVTELATRVVEEFGLAYLNNVQVRYRRATPVLLE CCCHHEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCHHHHCCCEEEEEECCEEEEE VNTRAASGTYQSAAAGLNLPWLALALLLGEPVEVGSPDLPQTLIAYNEAMVMRPLDRLSP ECCCCCCCCHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCHHHCCC RPRGHGVARDAARRLGSAAGRVHRRSTGPDRAQPA CCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure SAARLWFNQTWRGTYQLIGLLRDGAGPGRLTVLGSHQIPSTPFLQACDAVIDEPPGEGD CCCCEECCCCCCHHHHHHHHHHCCCCCCEEEEEECCCCCCCHHHHHHHHHHCCCCCCHH EFVEQALAACRRHGIDVFVPGRNMLDVAARVGEFEAAGVRVMCSPAASARIFTTKSGQYA HHHHHHHHHHHHCCCEEEECCCCHHHHHHHHCCCCCCCEEEEECCCCCEEEEEECCCCEE AMAARGLPVPHTRTVTTFAEFEAACDELSAAGCTVCVKPDVDHGGQGFRIIDGDAERLTA EHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCEEEEECCCHHHHHE LFEPPSVRVSPATMERILGRAGSFPALVVGEFLDGPEFSVDVLSRPAPGTSPAPGAGPVA EECCCCCEECHHHHHHHHHCCCCCCHHHHHHHCCCCCCCHHHHCCCCCCCCCCCCCCCCC MPGSVLAAVPRGKDGLPWTRNLRADAAVTELATRVVEEFGLAYLNNVQVRYRRATPVLLE CCCHHEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCHHHHCCCEEEEEECCEEEEE VNTRAASGTYQSAAAGLNLPWLALALLLGEPVEVGSPDLPQTLIAYNEAMVMRPLDRLSP ECCCCCCCCHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCHHHCCC RPRGHGVARDAARRLGSAAGRVHRRSTGPDRAQPA CCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA