Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

Click here to switch to the map view.

The map label for this gene is 158316718

Identifier: 158316718

GI number: 158316718

Start: 5949811

End: 5951919

Strand: Reverse

Name: 158316718

Synonym: Franean1_4956

Alternate gene names: NA

Gene position: 5951919-5949811 (Counterclockwise)

Preceding gene: 158316721

Following gene: 158316717

Centisome position: 66.26

GC content: 75.01

Gene sequence:

>2109_bases
GTGGTGTCGGCGGTTTTCGTCCCGGCGGGCGTCGCGCTGCTGACTGTGCACGAGACAGCCCAGCAGGCCCGTTTCTACCG
CGGCGCGCTGGACGAGGCGCGGGTGCACGAGCGGATCAGCGACGAGGTCCTGACCGACCCGGTGCTCACGGACGTGACCG
GTGACCTGCTCGCCGACCTGCCCGTCGACCCGGACCTGATGGTCGACAACCTGCAGCTCGTCGTCCCGCCGTCGGCGCTG
CGCGGGATGACCGACGGCGTCGCCGACAACGTCGCCGCCTACCTCGACGGCAGTCGCGCCGAGTTCGTCCTCGCCGTCGA
TCTGCGGCCGATCCTCGACAACATCGGGCGGCTCGCGTCCGTTTACCTCGCCGGGCAGGTGTCGGGCGCGCCGCGGTACC
GCACCGAGGACGTCGCCGCCGCCCTGCGCGACGTCCTCGACGGTGTGGACCGGGTCAGCCAGGGCCGCCCGCCCGCCTCC
GTGCCCGAGATCGATCTCACCGACGATCAGGTCGCCTGGGCGACCGACCTGCTGGTGAGCCGGGTGGACGGGGCCGACCG
GCCGGTCGCGCGGGAACAGGTGCTGGTCGCGCTGCGCTCCGGTGATCTCGGCGCCGCGCTGGCGGTCGTCGGCCCGCTGA
TCTTCGCCGGGGACGTGTCCGCCGTCGCCGACCTGCGGTCGCGCCTGGCCGGTGGCACCGTCCTCGACCTCGGCCGCCCG
CTCGCGGACGCGCCCGGCGGCCCGGCCGGCTTCGTGCTCCGCACGATCCACACGATCGGCGGCACGGGCATGCTCGCCCT
CGCCGCGCTCTGCTTCGCCCTGCCCGCCGGCGCGCTCGGTCTCGCCGTCCGGCGGCGCGGACCGTCGGTGCGGCTGGTGG
GCGCCGCGCTCGTCGCGGGCGGGCTGTCCGCGCTGGCTGCGGGGGTCCTCGTGACCGGCCTGGTCGGCGACCCGCTCGCG
CCGCTGCGCGGGCCGGACTCGCCCCTTCCCCCGGCGGGGCGGGTCCTCGCCGGAGACGTCGGCCGCGTGCTGGTCGCCAA
CGTGCGCGCGACCTGGAGCGAGATCGCGGCGATACCGCTCCTGGCCGGGCTCCTCCTCGGCACCGTGACGGTTGTGGTGC
GCCGGCTGTCGCGCGCCGAGTGGCGCGTGCGGCGCCTGGTGGCGGTGGGCACGACCTGCTCGGTGTTCGTCGCCGTGTCC
TGGGTGCTGATCCCCGGCGAGGCGGGCACCGGCACCGCGTTCTGCAACGGCGGGGCGGACCTGTGCAACCGGCGCTACTC
CGACGTGGTCTACCCGACGACCCACAACGGGATGGCGTCCGTGCAGGCCGGGTTCCTCGGCGCGGTGCAGGACCCCGACC
TGGTGGGCCAGCTCGACAGCGGCATCCGCGCCCTGATGCTCGACGTCCACCACTGGACGACACCCGCGGAGGTCGAGTCG
TTCCTGGCCGAGCTGCGCCCGCGGGCCCGCGAGGCGCTCGCCCCGTTCGCCACCGGTGCCCGTTCGAGCCGCCCCGGGCT
CTGGCTCTGCCACGGCATCTGCCAGCTCGGCGCGACCCGCCTGGACGACGCGCTGGCCGGCGTCGCGGGCTGGCTGGCGC
GCAACCCGGCCGAGGTCATCACCATCATCGTCCAGGACGGCGTCGCACCCGAACCGATCATGGCCGCGTTCCGGGCGGCG
GCCCTCGGTCAGTACCTGGTCCGCCCGCCCGCGCCGGGCCGGCCGTGGCCGACCCTCGGCCAGCTGATCGACCGTGGCCG
GCGCCTGGTCGTCTTCGCCGAGAACGGGGACGTGCCCGGCACCTGGTACCGCAACTTCTACCGCTCCAACGCGGACACCC
CGTTCGACGTCCGGATCCCCGGGGGCTTCAGCTGCCGGATCGGCCGCGGGGCCAGCCGGCCCACCATGCTCCTCATCAAC
CACTGGCTCACCGACCACGCCGCCACCCGCGCCGACGCGGCGCTGGTGAACACCAGCTCGTCGCTGACGGCGCACGCCGA
GCAGTGCGCCGCCCGCGGGCTGCGCCCGACCTTCCTCGCGGTCAACTTCGCGACGGTCGGTGATCTTGTCTCCACCGTCG
CCGCCTACAACCGGCATTCGCCCGACTGA

Upstream 100 bases:

>100_bases
ACGGGGCTGGGTGGTTCGGGTCCGGCCCGGCTGGTCCCGTCTCGCCCGTTTTGTTGGGATCCGGCGGCGTGGCGTCGGGG
GTGTGGTCTGCCTGGTCGCG

Downstream 100 bases:

>100_bases
TCACTCAGGTGCTCCCGGTAATCTGAATGTCGCTGTATGTGACGGGAAGATTTCCTGCCGGGTCGGGACGGAGGCGACAT
CGAACCCCCCGCCGCGCCGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 702; Mature: 702

Protein sequence:

>702_residues
MVSAVFVPAGVALLTVHETAQQARFYRGALDEARVHERISDEVLTDPVLTDVTGDLLADLPVDPDLMVDNLQLVVPPSAL
RGMTDGVADNVAAYLDGSRAEFVLAVDLRPILDNIGRLASVYLAGQVSGAPRYRTEDVAAALRDVLDGVDRVSQGRPPAS
VPEIDLTDDQVAWATDLLVSRVDGADRPVAREQVLVALRSGDLGAALAVVGPLIFAGDVSAVADLRSRLAGGTVLDLGRP
LADAPGGPAGFVLRTIHTIGGTGMLALAALCFALPAGALGLAVRRRGPSVRLVGAALVAGGLSALAAGVLVTGLVGDPLA
PLRGPDSPLPPAGRVLAGDVGRVLVANVRATWSEIAAIPLLAGLLLGTVTVVVRRLSRAEWRVRRLVAVGTTCSVFVAVS
WVLIPGEAGTGTAFCNGGADLCNRRYSDVVYPTTHNGMASVQAGFLGAVQDPDLVGQLDSGIRALMLDVHHWTTPAEVES
FLAELRPRAREALAPFATGARSSRPGLWLCHGICQLGATRLDDALAGVAGWLARNPAEVITIIVQDGVAPEPIMAAFRAA
ALGQYLVRPPAPGRPWPTLGQLIDRGRRLVVFAENGDVPGTWYRNFYRSNADTPFDVRIPGGFSCRIGRGASRPTMLLIN
HWLTDHAATRADAALVNTSSSLTAHAEQCAARGLRPTFLAVNFATVGDLVSTVAAYNRHSPD

Sequences:

>Translated_702_residues
MVSAVFVPAGVALLTVHETAQQARFYRGALDEARVHERISDEVLTDPVLTDVTGDLLADLPVDPDLMVDNLQLVVPPSAL
RGMTDGVADNVAAYLDGSRAEFVLAVDLRPILDNIGRLASVYLAGQVSGAPRYRTEDVAAALRDVLDGVDRVSQGRPPAS
VPEIDLTDDQVAWATDLLVSRVDGADRPVAREQVLVALRSGDLGAALAVVGPLIFAGDVSAVADLRSRLAGGTVLDLGRP
LADAPGGPAGFVLRTIHTIGGTGMLALAALCFALPAGALGLAVRRRGPSVRLVGAALVAGGLSALAAGVLVTGLVGDPLA
PLRGPDSPLPPAGRVLAGDVGRVLVANVRATWSEIAAIPLLAGLLLGTVTVVVRRLSRAEWRVRRLVAVGTTCSVFVAVS
WVLIPGEAGTGTAFCNGGADLCNRRYSDVVYPTTHNGMASVQAGFLGAVQDPDLVGQLDSGIRALMLDVHHWTTPAEVES
FLAELRPRAREALAPFATGARSSRPGLWLCHGICQLGATRLDDALAGVAGWLARNPAEVITIIVQDGVAPEPIMAAFRAA
ALGQYLVRPPAPGRPWPTLGQLIDRGRRLVVFAENGDVPGTWYRNFYRSNADTPFDVRIPGGFSCRIGRGASRPTMLLIN
HWLTDHAATRADAALVNTSSSLTAHAEQCAARGLRPTFLAVNFATVGDLVSTVAAYNRHSPD
>Mature_702_residues
MVSAVFVPAGVALLTVHETAQQARFYRGALDEARVHERISDEVLTDPVLTDVTGDLLADLPVDPDLMVDNLQLVVPPSAL
RGMTDGVADNVAAYLDGSRAEFVLAVDLRPILDNIGRLASVYLAGQVSGAPRYRTEDVAAALRDVLDGVDRVSQGRPPAS
VPEIDLTDDQVAWATDLLVSRVDGADRPVAREQVLVALRSGDLGAALAVVGPLIFAGDVSAVADLRSRLAGGTVLDLGRP
LADAPGGPAGFVLRTIHTIGGTGMLALAALCFALPAGALGLAVRRRGPSVRLVGAALVAGGLSALAAGVLVTGLVGDPLA
PLRGPDSPLPPAGRVLAGDVGRVLVANVRATWSEIAAIPLLAGLLLGTVTVVVRRLSRAEWRVRRLVAVGTTCSVFVAVS
WVLIPGEAGTGTAFCNGGADLCNRRYSDVVYPTTHNGMASVQAGFLGAVQDPDLVGQLDSGIRALMLDVHHWTTPAEVES
FLAELRPRAREALAPFATGARSSRPGLWLCHGICQLGATRLDDALAGVAGWLARNPAEVITIIVQDGVAPEPIMAAFRAA
ALGQYLVRPPAPGRPWPTLGQLIDRGRRLVVFAENGDVPGTWYRNFYRSNADTPFDVRIPGGFSCRIGRGASRPTMLLIN
HWLTDHAATRADAALVNTSSSLTAHAEQCAARGLRPTFLAVNFATVGDLVSTVAAYNRHSPD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 73436; Mature: 73436

Theoretical pI: Translated: 6.30; Mature: 6.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVSAVFVPAGVALLTVHETAQQARFYRGALDEARVHERISDEVLTDPVLTDVTGDLLADL
CCCEEEECCCEEEEEEHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCHHHHCCHHHHHCC
PVDPDLMVDNLQLVVPPSALRGMTDGVADNVAAYLDGSRAEFVLAVDLRPILDNIGRLAS
CCCCCCEECCEEEEECCHHHHCCCCHHHHHHHHHCCCCCCEEEEEEECHHHHHHHHHHHH
VYLAGQVSGAPRYRTEDVAAALRDVLDGVDRVSQGRPPASVPEIDLTDDQVAWATDLLVS
HHHEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHH
RVDGADRPVAREQVLVALRSGDLGAALAVVGPLIFAGDVSAVADLRSRLAGGTVLDLGRP
HCCCCCCCHHHHHHEEEEECCCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCEECCCCC
LADAPGGPAGFVLRTIHTIGGTGMLALAALCFALPAGALGLAVRRRGPSVRLVGAALVAG
CCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHCCCCCEEEHHHHHHHH
GLSALAAGVLVTGLVGDPLAPLRGPDSPLPPAGRVLAGDVGRVLVANVRATWSEIAAIPL
HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHH
LAGLLLGTVTVVVRRLSRAEWRVRRLVAVGTTCSVFVAVSWVLIPGEAGTGTAFCNGGAD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHEEEEEEEEEECCCCCCCEEECCCHH
LCNRRYSDVVYPTTHNGMASVQAGFLGAVQDPDLVGQLDSGIRALMLDVHHWTTPAEVES
HHCCCCCCEECCCCCCCHHHHHHCCCCCCCCCHHHHHHHCCHHHHHHHHHCCCCHHHHHH
FLAELRPRAREALAPFATGARSSRPGLWLCHGICQLGATRLDDALAGVAGWLARNPAEVI
HHHHHCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHCCHHHEE
TIIVQDGVAPEPIMAAFRAAALGQYLVRPPAPGRPWPTLGQLIDRGRRLVVFAENGDVPG
EEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCEEEEEECCCCCCC
TWYRNFYRSNADTPFDVRIPGGFSCRIGRGASRPTMLLINHWLTDHAATRADAALVNTSS
HHHHHHHHCCCCCCEEEECCCCCEEEECCCCCCCEEEEHHHHHHHHHHHHHHHHEEECCC
SLTAHAEQCAARGLRPTFLAVNFATVGDLVSTVAAYNRHSPD
HHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MVSAVFVPAGVALLTVHETAQQARFYRGALDEARVHERISDEVLTDPVLTDVTGDLLADL
CCCEEEECCCEEEEEEHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCHHHHCCHHHHHCC
PVDPDLMVDNLQLVVPPSALRGMTDGVADNVAAYLDGSRAEFVLAVDLRPILDNIGRLAS
CCCCCCEECCEEEEECCHHHHCCCCHHHHHHHHHCCCCCCEEEEEEECHHHHHHHHHHHH
VYLAGQVSGAPRYRTEDVAAALRDVLDGVDRVSQGRPPASVPEIDLTDDQVAWATDLLVS
HHHEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHH
RVDGADRPVAREQVLVALRSGDLGAALAVVGPLIFAGDVSAVADLRSRLAGGTVLDLGRP
HCCCCCCCHHHHHHEEEEECCCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCEECCCCC
LADAPGGPAGFVLRTIHTIGGTGMLALAALCFALPAGALGLAVRRRGPSVRLVGAALVAG
CCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHCCCCCEEEHHHHHHHH
GLSALAAGVLVTGLVGDPLAPLRGPDSPLPPAGRVLAGDVGRVLVANVRATWSEIAAIPL
HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHH
LAGLLLGTVTVVVRRLSRAEWRVRRLVAVGTTCSVFVAVSWVLIPGEAGTGTAFCNGGAD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHEEEEEEEEEECCCCCCCEEECCCHH
LCNRRYSDVVYPTTHNGMASVQAGFLGAVQDPDLVGQLDSGIRALMLDVHHWTTPAEVES
HHCCCCCCEECCCCCCCHHHHHHCCCCCCCCCHHHHHHHCCHHHHHHHHHCCCCHHHHHH
FLAELRPRAREALAPFATGARSSRPGLWLCHGICQLGATRLDDALAGVAGWLARNPAEVI
HHHHHCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHCCHHHEE
TIIVQDGVAPEPIMAAFRAAALGQYLVRPPAPGRPWPTLGQLIDRGRRLVVFAENGDVPG
EEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCEEEEEECCCCCCC
TWYRNFYRSNADTPFDVRIPGGFSCRIGRGASRPTMLLINHWLTDHAATRADAALVNTSS
HHHHHHHHCCCCCCEEEECCCCCEEEECCCCCCCEEEEHHHHHHHHHHHHHHHHEEECCC
SLTAHAEQCAARGLRPTFLAVNFATVGDLVSTVAAYNRHSPD
HHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA