| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158316718
Identifier: 158316718
GI number: 158316718
Start: 5949811
End: 5951919
Strand: Reverse
Name: 158316718
Synonym: Franean1_4956
Alternate gene names: NA
Gene position: 5951919-5949811 (Counterclockwise)
Preceding gene: 158316721
Following gene: 158316717
Centisome position: 66.26
GC content: 75.01
Gene sequence:
>2109_bases GTGGTGTCGGCGGTTTTCGTCCCGGCGGGCGTCGCGCTGCTGACTGTGCACGAGACAGCCCAGCAGGCCCGTTTCTACCG CGGCGCGCTGGACGAGGCGCGGGTGCACGAGCGGATCAGCGACGAGGTCCTGACCGACCCGGTGCTCACGGACGTGACCG GTGACCTGCTCGCCGACCTGCCCGTCGACCCGGACCTGATGGTCGACAACCTGCAGCTCGTCGTCCCGCCGTCGGCGCTG CGCGGGATGACCGACGGCGTCGCCGACAACGTCGCCGCCTACCTCGACGGCAGTCGCGCCGAGTTCGTCCTCGCCGTCGA TCTGCGGCCGATCCTCGACAACATCGGGCGGCTCGCGTCCGTTTACCTCGCCGGGCAGGTGTCGGGCGCGCCGCGGTACC GCACCGAGGACGTCGCCGCCGCCCTGCGCGACGTCCTCGACGGTGTGGACCGGGTCAGCCAGGGCCGCCCGCCCGCCTCC GTGCCCGAGATCGATCTCACCGACGATCAGGTCGCCTGGGCGACCGACCTGCTGGTGAGCCGGGTGGACGGGGCCGACCG GCCGGTCGCGCGGGAACAGGTGCTGGTCGCGCTGCGCTCCGGTGATCTCGGCGCCGCGCTGGCGGTCGTCGGCCCGCTGA TCTTCGCCGGGGACGTGTCCGCCGTCGCCGACCTGCGGTCGCGCCTGGCCGGTGGCACCGTCCTCGACCTCGGCCGCCCG CTCGCGGACGCGCCCGGCGGCCCGGCCGGCTTCGTGCTCCGCACGATCCACACGATCGGCGGCACGGGCATGCTCGCCCT CGCCGCGCTCTGCTTCGCCCTGCCCGCCGGCGCGCTCGGTCTCGCCGTCCGGCGGCGCGGACCGTCGGTGCGGCTGGTGG GCGCCGCGCTCGTCGCGGGCGGGCTGTCCGCGCTGGCTGCGGGGGTCCTCGTGACCGGCCTGGTCGGCGACCCGCTCGCG CCGCTGCGCGGGCCGGACTCGCCCCTTCCCCCGGCGGGGCGGGTCCTCGCCGGAGACGTCGGCCGCGTGCTGGTCGCCAA CGTGCGCGCGACCTGGAGCGAGATCGCGGCGATACCGCTCCTGGCCGGGCTCCTCCTCGGCACCGTGACGGTTGTGGTGC GCCGGCTGTCGCGCGCCGAGTGGCGCGTGCGGCGCCTGGTGGCGGTGGGCACGACCTGCTCGGTGTTCGTCGCCGTGTCC TGGGTGCTGATCCCCGGCGAGGCGGGCACCGGCACCGCGTTCTGCAACGGCGGGGCGGACCTGTGCAACCGGCGCTACTC CGACGTGGTCTACCCGACGACCCACAACGGGATGGCGTCCGTGCAGGCCGGGTTCCTCGGCGCGGTGCAGGACCCCGACC TGGTGGGCCAGCTCGACAGCGGCATCCGCGCCCTGATGCTCGACGTCCACCACTGGACGACACCCGCGGAGGTCGAGTCG TTCCTGGCCGAGCTGCGCCCGCGGGCCCGCGAGGCGCTCGCCCCGTTCGCCACCGGTGCCCGTTCGAGCCGCCCCGGGCT CTGGCTCTGCCACGGCATCTGCCAGCTCGGCGCGACCCGCCTGGACGACGCGCTGGCCGGCGTCGCGGGCTGGCTGGCGC GCAACCCGGCCGAGGTCATCACCATCATCGTCCAGGACGGCGTCGCACCCGAACCGATCATGGCCGCGTTCCGGGCGGCG GCCCTCGGTCAGTACCTGGTCCGCCCGCCCGCGCCGGGCCGGCCGTGGCCGACCCTCGGCCAGCTGATCGACCGTGGCCG GCGCCTGGTCGTCTTCGCCGAGAACGGGGACGTGCCCGGCACCTGGTACCGCAACTTCTACCGCTCCAACGCGGACACCC CGTTCGACGTCCGGATCCCCGGGGGCTTCAGCTGCCGGATCGGCCGCGGGGCCAGCCGGCCCACCATGCTCCTCATCAAC CACTGGCTCACCGACCACGCCGCCACCCGCGCCGACGCGGCGCTGGTGAACACCAGCTCGTCGCTGACGGCGCACGCCGA GCAGTGCGCCGCCCGCGGGCTGCGCCCGACCTTCCTCGCGGTCAACTTCGCGACGGTCGGTGATCTTGTCTCCACCGTCG CCGCCTACAACCGGCATTCGCCCGACTGA
Upstream 100 bases:
>100_bases ACGGGGCTGGGTGGTTCGGGTCCGGCCCGGCTGGTCCCGTCTCGCCCGTTTTGTTGGGATCCGGCGGCGTGGCGTCGGGG GTGTGGTCTGCCTGGTCGCG
Downstream 100 bases:
>100_bases TCACTCAGGTGCTCCCGGTAATCTGAATGTCGCTGTATGTGACGGGAAGATTTCCTGCCGGGTCGGGACGGAGGCGACAT CGAACCCCCCGCCGCGCCGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 702; Mature: 702
Protein sequence:
>702_residues MVSAVFVPAGVALLTVHETAQQARFYRGALDEARVHERISDEVLTDPVLTDVTGDLLADLPVDPDLMVDNLQLVVPPSAL RGMTDGVADNVAAYLDGSRAEFVLAVDLRPILDNIGRLASVYLAGQVSGAPRYRTEDVAAALRDVLDGVDRVSQGRPPAS VPEIDLTDDQVAWATDLLVSRVDGADRPVAREQVLVALRSGDLGAALAVVGPLIFAGDVSAVADLRSRLAGGTVLDLGRP LADAPGGPAGFVLRTIHTIGGTGMLALAALCFALPAGALGLAVRRRGPSVRLVGAALVAGGLSALAAGVLVTGLVGDPLA PLRGPDSPLPPAGRVLAGDVGRVLVANVRATWSEIAAIPLLAGLLLGTVTVVVRRLSRAEWRVRRLVAVGTTCSVFVAVS WVLIPGEAGTGTAFCNGGADLCNRRYSDVVYPTTHNGMASVQAGFLGAVQDPDLVGQLDSGIRALMLDVHHWTTPAEVES FLAELRPRAREALAPFATGARSSRPGLWLCHGICQLGATRLDDALAGVAGWLARNPAEVITIIVQDGVAPEPIMAAFRAA ALGQYLVRPPAPGRPWPTLGQLIDRGRRLVVFAENGDVPGTWYRNFYRSNADTPFDVRIPGGFSCRIGRGASRPTMLLIN HWLTDHAATRADAALVNTSSSLTAHAEQCAARGLRPTFLAVNFATVGDLVSTVAAYNRHSPD
Sequences:
>Translated_702_residues MVSAVFVPAGVALLTVHETAQQARFYRGALDEARVHERISDEVLTDPVLTDVTGDLLADLPVDPDLMVDNLQLVVPPSAL RGMTDGVADNVAAYLDGSRAEFVLAVDLRPILDNIGRLASVYLAGQVSGAPRYRTEDVAAALRDVLDGVDRVSQGRPPAS VPEIDLTDDQVAWATDLLVSRVDGADRPVAREQVLVALRSGDLGAALAVVGPLIFAGDVSAVADLRSRLAGGTVLDLGRP LADAPGGPAGFVLRTIHTIGGTGMLALAALCFALPAGALGLAVRRRGPSVRLVGAALVAGGLSALAAGVLVTGLVGDPLA PLRGPDSPLPPAGRVLAGDVGRVLVANVRATWSEIAAIPLLAGLLLGTVTVVVRRLSRAEWRVRRLVAVGTTCSVFVAVS WVLIPGEAGTGTAFCNGGADLCNRRYSDVVYPTTHNGMASVQAGFLGAVQDPDLVGQLDSGIRALMLDVHHWTTPAEVES FLAELRPRAREALAPFATGARSSRPGLWLCHGICQLGATRLDDALAGVAGWLARNPAEVITIIVQDGVAPEPIMAAFRAA ALGQYLVRPPAPGRPWPTLGQLIDRGRRLVVFAENGDVPGTWYRNFYRSNADTPFDVRIPGGFSCRIGRGASRPTMLLIN HWLTDHAATRADAALVNTSSSLTAHAEQCAARGLRPTFLAVNFATVGDLVSTVAAYNRHSPD >Mature_702_residues MVSAVFVPAGVALLTVHETAQQARFYRGALDEARVHERISDEVLTDPVLTDVTGDLLADLPVDPDLMVDNLQLVVPPSAL RGMTDGVADNVAAYLDGSRAEFVLAVDLRPILDNIGRLASVYLAGQVSGAPRYRTEDVAAALRDVLDGVDRVSQGRPPAS VPEIDLTDDQVAWATDLLVSRVDGADRPVAREQVLVALRSGDLGAALAVVGPLIFAGDVSAVADLRSRLAGGTVLDLGRP LADAPGGPAGFVLRTIHTIGGTGMLALAALCFALPAGALGLAVRRRGPSVRLVGAALVAGGLSALAAGVLVTGLVGDPLA PLRGPDSPLPPAGRVLAGDVGRVLVANVRATWSEIAAIPLLAGLLLGTVTVVVRRLSRAEWRVRRLVAVGTTCSVFVAVS WVLIPGEAGTGTAFCNGGADLCNRRYSDVVYPTTHNGMASVQAGFLGAVQDPDLVGQLDSGIRALMLDVHHWTTPAEVES FLAELRPRAREALAPFATGARSSRPGLWLCHGICQLGATRLDDALAGVAGWLARNPAEVITIIVQDGVAPEPIMAAFRAA ALGQYLVRPPAPGRPWPTLGQLIDRGRRLVVFAENGDVPGTWYRNFYRSNADTPFDVRIPGGFSCRIGRGASRPTMLLIN HWLTDHAATRADAALVNTSSSLTAHAEQCAARGLRPTFLAVNFATVGDLVSTVAAYNRHSPD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 73436; Mature: 73436
Theoretical pI: Translated: 6.30; Mature: 6.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVSAVFVPAGVALLTVHETAQQARFYRGALDEARVHERISDEVLTDPVLTDVTGDLLADL CCCEEEECCCEEEEEEHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCHHHHCCHHHHHCC PVDPDLMVDNLQLVVPPSALRGMTDGVADNVAAYLDGSRAEFVLAVDLRPILDNIGRLAS CCCCCCEECCEEEEECCHHHHCCCCHHHHHHHHHCCCCCCEEEEEEECHHHHHHHHHHHH VYLAGQVSGAPRYRTEDVAAALRDVLDGVDRVSQGRPPASVPEIDLTDDQVAWATDLLVS HHHEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHH RVDGADRPVAREQVLVALRSGDLGAALAVVGPLIFAGDVSAVADLRSRLAGGTVLDLGRP HCCCCCCCHHHHHHEEEEECCCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCEECCCCC LADAPGGPAGFVLRTIHTIGGTGMLALAALCFALPAGALGLAVRRRGPSVRLVGAALVAG CCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHCCCCCEEEHHHHHHHH GLSALAAGVLVTGLVGDPLAPLRGPDSPLPPAGRVLAGDVGRVLVANVRATWSEIAAIPL HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHH LAGLLLGTVTVVVRRLSRAEWRVRRLVAVGTTCSVFVAVSWVLIPGEAGTGTAFCNGGAD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHEEEEEEEEEECCCCCCCEEECCCHH LCNRRYSDVVYPTTHNGMASVQAGFLGAVQDPDLVGQLDSGIRALMLDVHHWTTPAEVES HHCCCCCCEECCCCCCCHHHHHHCCCCCCCCCHHHHHHHCCHHHHHHHHHCCCCHHHHHH FLAELRPRAREALAPFATGARSSRPGLWLCHGICQLGATRLDDALAGVAGWLARNPAEVI HHHHHCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHCCHHHEE TIIVQDGVAPEPIMAAFRAAALGQYLVRPPAPGRPWPTLGQLIDRGRRLVVFAENGDVPG EEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCEEEEEECCCCCCC TWYRNFYRSNADTPFDVRIPGGFSCRIGRGASRPTMLLINHWLTDHAATRADAALVNTSS HHHHHHHHCCCCCCEEEECCCCCEEEECCCCCCCEEEEHHHHHHHHHHHHHHHHEEECCC SLTAHAEQCAARGLRPTFLAVNFATVGDLVSTVAAYNRHSPD HHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MVSAVFVPAGVALLTVHETAQQARFYRGALDEARVHERISDEVLTDPVLTDVTGDLLADL CCCEEEECCCEEEEEEHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCHHHHCCHHHHHCC PVDPDLMVDNLQLVVPPSALRGMTDGVADNVAAYLDGSRAEFVLAVDLRPILDNIGRLAS CCCCCCEECCEEEEECCHHHHCCCCHHHHHHHHHCCCCCCEEEEEEECHHHHHHHHHHHH VYLAGQVSGAPRYRTEDVAAALRDVLDGVDRVSQGRPPASVPEIDLTDDQVAWATDLLVS HHHEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHH RVDGADRPVAREQVLVALRSGDLGAALAVVGPLIFAGDVSAVADLRSRLAGGTVLDLGRP HCCCCCCCHHHHHHEEEEECCCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCEECCCCC LADAPGGPAGFVLRTIHTIGGTGMLALAALCFALPAGALGLAVRRRGPSVRLVGAALVAG CCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHCCCCCEEEHHHHHHHH GLSALAAGVLVTGLVGDPLAPLRGPDSPLPPAGRVLAGDVGRVLVANVRATWSEIAAIPL HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHH LAGLLLGTVTVVVRRLSRAEWRVRRLVAVGTTCSVFVAVSWVLIPGEAGTGTAFCNGGAD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHEEEEEEEEEECCCCCCCEEECCCHH LCNRRYSDVVYPTTHNGMASVQAGFLGAVQDPDLVGQLDSGIRALMLDVHHWTTPAEVES HHCCCCCCEECCCCCCCHHHHHHCCCCCCCCCHHHHHHHCCHHHHHHHHHCCCCHHHHHH FLAELRPRAREALAPFATGARSSRPGLWLCHGICQLGATRLDDALAGVAGWLARNPAEVI HHHHHCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHCCHHHEE TIIVQDGVAPEPIMAAFRAAALGQYLVRPPAPGRPWPTLGQLIDRGRRLVVFAENGDVPG EEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCEEEEEECCCCCCC TWYRNFYRSNADTPFDVRIPGGFSCRIGRGASRPTMLLINHWLTDHAATRADAALVNTSS HHHHHHHHCCCCCCEEEECCCCCEEEECCCCCCCEEEEHHHHHHHHHHHHHHHHEEECCC SLTAHAEQCAARGLRPTFLAVNFATVGDLVSTVAAYNRHSPD HHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA