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The map label for this gene is dnrI [H]

Identifier: 158316717

GI number: 158316717

Start: 5948790

End: 5949668

Strand: Reverse

Name: dnrI [H]

Synonym: Franean1_4955

Alternate gene names: 158316717

Gene position: 5949668-5948790 (Counterclockwise)

Preceding gene: 158316718

Following gene: 158316716

Centisome position: 66.24

GC content: 75.09

Gene sequence:

>879_bases
ATGGAACCGCGGCGTCACCTGCCCTTCCGGGTCCTCGGCCCGCTGGAGGTGAACGCGTCCGACGGCCATACCGTGCCGAT
CGGGCAGCCGAAGAAGCGGCGCCTGCTCTCGCTGCTGCTGTTCAGCCGCGGCCGCTGGACGAGCACCGAGCGGATCCGCT
CGGTGCTGTGGGACGCCGACCCGCCGCCCTCGGCCCTCGGCAACATCAAGACCTACGTCTCCGACCTGCGCCAGATGCTC
CCGCCGGGGGAGACGGCCGGACTCGGCCGCATCCAGAGCCGGCCGGGCGGCTACCGGCTCAACGCCGCCGCCACCGAGGT
CGACGTCTGGATCTTCGAGGACGCGGCGCGCCGCGGCCAGGACGCCCGGTGGGCCGGCGACCGCGACCGGGCCGTCGATC
TGTTCGGCGACGCGCTGGCCGTGTGGCGCGGCGAGCCGTACGACGAGCTTCCCGAGGAGGTCACCCGCGCCGAGTCGGCC
CGCCTGCACGAACTGCGCGCGGTGGTGCACGAGGACCTCATCGACGCGCTGCTCGACCGCGGCCAGTACGACCGGGTCCT
GCCGATGCTGCGGGCGCTGACCGTCCAGCACCCGCTGCGGGAGCGGCTGTGGGGCCAGTTCCTGGTGGCGGCATGCCGCT
CCGGGCACCGCGCCGAGGCGCTCGCCGCCTACCGCACCGCCTACCACCTGCTGTCCCGGGAGCTGGGCGTGGAACCCAGC
GGTGAGCTGCGCCGGATCCACGCCCAGGTGCTCGCCGGCGAGCTTGACGCGACCACAGCGCCGACCACAGCGCCGACCAC
AGCGCCGGCCGGGGCGAATGGATGGGGCGGCGGCCGCGCGCGCCCGCGCGCCGCCGGCGGACGAGAGGAACGGGTCTGA

Upstream 100 bases:

>100_bases
CGGGAAGATTTCCTGCCGGGTCGGGACGGAGGCGACATCGAACCCCCCGCCGCGCCGGCCGGACCGTCTAAGCCCGCCGC
CGGCTGGGGAGGAACGCCTC

Downstream 100 bases:

>100_bases
CCGTGTCGACGCAGCTGCGCAAGCACGTGATCCGCACCGAGACCGAGTACGGCGCCGTCCTGCTCGACGAGCGGACCGGC
TGTTACTGGACCCTGAACCC

Product: SARP family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 292; Mature: 292

Protein sequence:

>292_residues
MEPRRHLPFRVLGPLEVNASDGHTVPIGQPKKRRLLSLLLFSRGRWTSTERIRSVLWDADPPPSALGNIKTYVSDLRQML
PPGETAGLGRIQSRPGGYRLNAAATEVDVWIFEDAARRGQDARWAGDRDRAVDLFGDALAVWRGEPYDELPEEVTRAESA
RLHELRAVVHEDLIDALLDRGQYDRVLPMLRALTVQHPLRERLWGQFLVAACRSGHRAEALAAYRTAYHLLSRELGVEPS
GELRRIHAQVLAGELDATTAPTTAPTTAPAGANGWGGGRARPRAAGGREERV

Sequences:

>Translated_292_residues
MEPRRHLPFRVLGPLEVNASDGHTVPIGQPKKRRLLSLLLFSRGRWTSTERIRSVLWDADPPPSALGNIKTYVSDLRQML
PPGETAGLGRIQSRPGGYRLNAAATEVDVWIFEDAARRGQDARWAGDRDRAVDLFGDALAVWRGEPYDELPEEVTRAESA
RLHELRAVVHEDLIDALLDRGQYDRVLPMLRALTVQHPLRERLWGQFLVAACRSGHRAEALAAYRTAYHLLSRELGVEPS
GELRRIHAQVLAGELDATTAPTTAPTTAPAGANGWGGGRARPRAAGGREERV
>Mature_292_residues
MEPRRHLPFRVLGPLEVNASDGHTVPIGQPKKRRLLSLLLFSRGRWTSTERIRSVLWDADPPPSALGNIKTYVSDLRQML
PPGETAGLGRIQSRPGGYRLNAAATEVDVWIFEDAARRGQDARWAGDRDRAVDLFGDALAVWRGEPYDELPEEVTRAESA
RLHELRAVVHEDLIDALLDRGQYDRVLPMLRALTVQHPLRERLWGQFLVAACRSGHRAEALAAYRTAYHLLSRELGVEPS
GELRRIHAQVLAGELDATTAPTTAPTTAPAGANGWGGGRARPRAAGGREERV

Specific function: May form, with dnrJ a two-component regulatory system for daunorubicin biosynthesis genes [H]

COG id: COG3629

COG function: function code T; DNA-binding transcriptional activator of the SARP family

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the AfsR/DnrI/RedD regulatory family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005158
- InterPro:   IPR001867
- InterPro:   IPR016032
- InterPro:   IPR011990
- InterPro:   IPR011991 [H]

Pfam domain/function: PF03704 BTAD; PF00486 Trans_reg_C [H]

EC number: NA

Molecular weight: Translated: 32311; Mature: 32311

Theoretical pI: Translated: 9.44; Mature: 9.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEPRRHLPFRVLGPLEVNASDGHTVPIGQPKKRRLLSLLLFSRGRWTSTERIRSVLWDAD
CCCCCCCCEEEECCEEECCCCCCEECCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCC
PPPSALGNIKTYVSDLRQMLPPGETAGLGRIQSRPGGYRLNAAATEVDVWIFEDAARRGQ
CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEECCHHEEEEEEEHHHHHCCC
DARWAGDRDRAVDLFGDALAVWRGEPYDELPEEVTRAESARLHELRAVVHEDLIDALLDR
CCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
GQYDRVLPMLRALTVQHPLRERLWGQFLVAACRSGHRAEALAAYRTAYHLLSRELGVEPS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCC
GELRRIHAQVLAGELDATTAPTTAPTTAPAGANGWGGGRARPRAAGGREERV
HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MEPRRHLPFRVLGPLEVNASDGHTVPIGQPKKRRLLSLLLFSRGRWTSTERIRSVLWDAD
CCCCCCCCEEEECCEEECCCCCCEECCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCC
PPPSALGNIKTYVSDLRQMLPPGETAGLGRIQSRPGGYRLNAAATEVDVWIFEDAARRGQ
CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEECCHHEEEEEEEHHHHHCCC
DARWAGDRDRAVDLFGDALAVWRGEPYDELPEEVTRAESARLHELRAVVHEDLIDALLDR
CCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
GQYDRVLPMLRALTVQHPLRERLWGQFLVAACRSGHRAEALAAYRTAYHLLSRELGVEPS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCC
GELRRIHAQVLAGELDATTAPTTAPTTAPAGANGWGGGRARPRAAGGREERV
HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1729206 [H]