Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

Click here to switch to the map view.

The map label for this gene is 158316721

Identifier: 158316721

GI number: 158316721

Start: 5953524

End: 5953853

Strand: Reverse

Name: 158316721

Synonym: Franean1_4959

Alternate gene names: NA

Gene position: 5953853-5953524 (Counterclockwise)

Preceding gene: 158316722

Following gene: 158316718

Centisome position: 66.29

GC content: 66.97

Gene sequence:

>330_bases
ATGGAAACCGTCCTGGACGACCTGCCGCTCGTCGTCCGGAAGATCCAGCGGTCGGTGCCGAGCAATGTCACCGCCGACCA
GCCAACCGTCTGGACGCCGGAGTTCTTCGACGTCGCCGACACCGAGGCCGAGGCCCTAGCCGCTCAACTGAGCGAAGCTC
TGGATGCGCCCGGATGGTATGTGGACCTGCACACCGCCCAGGACAGCTTCATCGTGTTCCCCGGTCGTCGCGCGCTACCG
ACGGGGAGACTCGCAGGGGCGTGCCGAGGCCCAGGACTACGGCCGCGCCCACGGCATTCCCGACTCACAACTCGACTGGC
CAACCTGTGA

Upstream 100 bases:

>100_bases
TCCCGCGAGCTCGACGCCCCTCGGTCAGGGGCCTTGATGCTGACTCCCGCAAAATGATCAACACCGCGGCCCGTTCCTGC
CGTATTCCGGTGGCACCTCC

Downstream 100 bases:

>100_bases
CCCTCCAACCAGCGAGAAACTCGCCCAGGACCTTCGACCTGCGCTCCGAGGTCCAGCGAGCCCGACGCAGGCAGAAGCAC
GGGACAAGTCGCCATGTCGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 109; Mature: 109

Protein sequence:

>109_residues
METVLDDLPLVVRKIQRSVPSNVTADQPTVWTPEFFDVADTEAEALAAQLSEALDAPGWYVDLHTAQDSFIVFPGRRALP
TGRLAGACRGPGLRPRPRHSRLTTRLANL

Sequences:

>Translated_109_residues
METVLDDLPLVVRKIQRSVPSNVTADQPTVWTPEFFDVADTEAEALAAQLSEALDAPGWYVDLHTAQDSFIVFPGRRALP
TGRLAGACRGPGLRPRPRHSRLTTRLANL
>Mature_109_residues
METVLDDLPLVVRKIQRSVPSNVTADQPTVWTPEFFDVADTEAEALAAQLSEALDAPGWYVDLHTAQDSFIVFPGRRALP
TGRLAGACRGPGLRPRPRHSRLTTRLANL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11977; Mature: 11977

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
METVLDDLPLVVRKIQRSVPSNVTADQPTVWTPEFFDVADTEAEALAAQLSEALDAPGWY
CCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEE
VDLHTAQDSFIVFPGRRALPTGRLAGACRGPGLRPRPRHSRLTTRLANL
EEEEECCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCC
>Mature Secondary Structure
METVLDDLPLVVRKIQRSVPSNVTADQPTVWTPEFFDVADTEAEALAAQLSEALDAPGWY
CCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEE
VDLHTAQDSFIVFPGRRALPTGRLAGACRGPGLRPRPRHSRLTTRLANL
EEEEECCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA