| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158316716
Identifier: 158316716
GI number: 158316716
Start: 5948533
End: 5948787
Strand: Reverse
Name: 158316716
Synonym: Franean1_4954
Alternate gene names: NA
Gene position: 5948787-5948533 (Counterclockwise)
Preceding gene: 158316717
Following gene: 158316715
Centisome position: 66.23
GC content: 74.9
Gene sequence:
>255_bases GTGTCGACGCAGCTGCGCAAGCACGTGATCCGCACCGAGACCGAGTACGGCGCCGTCCTGCTCGACGAGCGGACCGGCTG TTACTGGACCCTGAACCCCACCGCCGACCTCGCCGTCGGCGTGCTGGCCGGCGGCGGGACGCTCGCGCAGGCCGCGAGCG CGGTGACCGCCGCCTTCGACGTCGACGCCGCGACCGCGCGGTCCGACGTCGAACGGCTGGTCGCGACGCTGCGCTCAGCC GGGCTGGCCCGGTGA
Upstream 100 bases:
>100_bases CGACCACAGCGCCGACCACAGCGCCGGCCGGGGCGAATGGATGGGGCGGCGGCCGCGCGCGCCCGCGCGCCGCCGGCGGA CGAGAGGAACGGGTCTGACC
Downstream 100 bases:
>100_bases CCGGCCGGCCCCGGCGTGGCGGGGCCCAGCGAGGCGGGGCCTGGTGGCGGTGGCTGCGCCGGGACGCGCTCGCCCTGCTG GCCGTCACGCTCGCCCGCGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 84; Mature: 83
Protein sequence:
>84_residues MSTQLRKHVIRTETEYGAVLLDERTGCYWTLNPTADLAVGVLAGGGTLAQAASAVTAAFDVDAATARSDVERLVATLRSA GLAR
Sequences:
>Translated_84_residues MSTQLRKHVIRTETEYGAVLLDERTGCYWTLNPTADLAVGVLAGGGTLAQAASAVTAAFDVDAATARSDVERLVATLRSA GLAR >Mature_83_residues STQLRKHVIRTETEYGAVLLDERTGCYWTLNPTADLAVGVLAGGGTLAQAASAVTAAFDVDAATARSDVERLVATLRSAG LAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8764; Mature: 8633
Theoretical pI: Translated: 5.77; Mature: 5.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTQLRKHVIRTETEYGAVLLDERTGCYWTLNPTADLAVGVLAGGGTLAQAASAVTAAFD CCCHHHHHHHHCCCCCCEEEEECCCCEEEEECCCCHHEEEEEECCCHHHHHHHHHHHHHC VDAATARSDVERLVATLRSAGLAR CCHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure STQLRKHVIRTETEYGAVLLDERTGCYWTLNPTADLAVGVLAGGGTLAQAASAVTAAFD CCHHHHHHHHCCCCCCEEEEECCCCEEEEECCCCHHEEEEEECCCHHHHHHHHHHHHHC VDAATARSDVERLVATLRSAGLAR CCHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA