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The map label for this gene is pcaC [H]

Identifier: 158316478

GI number: 158316478

Start: 5627713

End: 5628615

Strand: Reverse

Name: pcaC [H]

Synonym: Franean1_4713

Alternate gene names: 158316478

Gene position: 5628615-5627713 (Counterclockwise)

Preceding gene: 158316479

Following gene: 158316477

Centisome position: 62.67

GC content: 70.32

Gene sequence:

>903_bases
ATGATGACCCAGGCGCAGCGCGAGGCGGCCTATGAACGGGTCCGCCGAGAGCTCGGCATCGACCGGGTCGGTACCGCGCC
CGACGCACCGGTGCTGCGGTCCCGCCAGGGCGGTGCGCCCGCGCGGCCGGCGTATGCCTTACCCGTGGAGGCCGAGATCC
ACGGCGCCCAGTTGTACGAGTACGAGATCTGGGGCCGGTCGGGGCTCGACCTCCGGACGCGGAGTTTCATCACTGTGGCC
GTCCTGACGGCCCTGGGCCGGGAAGACCAGCTCTACCGGTACGTCAACAGCGCGCTGAACATCGGGATCACTCCGGAGGA
GATCCACGAGACGTTGCTGCACGCCGGTGTGTACAGCGGCCTGCCGGCCTGGGAGAACGCGGCCGGTGTCGCGGGTGAGG
TGTTCGTCGCTCGGGGGCTGGTGCCGGCGGGCTCGGGTGCCCCGGTGGAGCCGAAGCCCGCGATGGACCACGAGGAGCGG
CGCGCGGCCAGGAACCGGGTGGTCGCCGCCCTGGGCGTCGGGCGTATCGGCCTCGGTCCCGACGCCCCCCTGCTCGAGCC
GCTGCCCGGCAGCCCCTTCCCGGCCGCCAAACCAGGCCGGCTGGCCTTCGAGCAGGAACTGGCCGGGATCACCGCCGACT
ACGGTTACGGCGAGGTGTGGGGCCGGCCCGGGCTCGATCTGCACACCAGGAGCTTCATCACCGTGAGCGTCCTGCAGGTC
CAGTATCAGAACGACCAGCTGCACATCCACGTCAACAATGCACTGAACCTGGGGATCACGCCCGAGGCGGTCGGCGAGGC
GATCACCCAGGCCGGCATCTACGACGGTGGGTCGGGGTGGCACAACGCCATGAACGTCGCCCGGCACGTCTTCCTCCAGC
ACGGCATCGTCGAAGGTGACTGA

Upstream 100 bases:

>100_bases
TGCTGCCGACCGCCGAGATCGCCGTGCTCCAGACAAGGGAGTCCGCAGGCACGGGGGTCCAACCATTCGAAGCTCCGTTC
ACCCAGGGAGGTACGTCGGG

Downstream 100 bases:

>100_bases
TGGGCATCCTCGACGGCAAGGTCGCCGTGATCACGGGTGCGGGGCAGGGTATCGGCAAGGCCTCGGCGGCGGTGTTCGTG
CGCGAGGGCGCCAGGGTGCT

Product: carboxymuconolactone decarboxylase

Products: NA

Alternate protein names: CMD [H]

Number of amino acids: Translated: 300; Mature: 300

Protein sequence:

>300_residues
MMTQAQREAAYERVRRELGIDRVGTAPDAPVLRSRQGGAPARPAYALPVEAEIHGAQLYEYEIWGRSGLDLRTRSFITVA
VLTALGREDQLYRYVNSALNIGITPEEIHETLLHAGVYSGLPAWENAAGVAGEVFVARGLVPAGSGAPVEPKPAMDHEER
RAARNRVVAALGVGRIGLGPDAPLLEPLPGSPFPAAKPGRLAFEQELAGITADYGYGEVWGRPGLDLHTRSFITVSVLQV
QYQNDQLHIHVNNALNLGITPEAVGEAITQAGIYDGGSGWHNAMNVARHVFLQHGIVEGD

Sequences:

>Translated_300_residues
MMTQAQREAAYERVRRELGIDRVGTAPDAPVLRSRQGGAPARPAYALPVEAEIHGAQLYEYEIWGRSGLDLRTRSFITVA
VLTALGREDQLYRYVNSALNIGITPEEIHETLLHAGVYSGLPAWENAAGVAGEVFVARGLVPAGSGAPVEPKPAMDHEER
RAARNRVVAALGVGRIGLGPDAPLLEPLPGSPFPAAKPGRLAFEQELAGITADYGYGEVWGRPGLDLHTRSFITVSVLQV
QYQNDQLHIHVNNALNLGITPEAVGEAITQAGIYDGGSGWHNAMNVARHVFLQHGIVEGD
>Mature_300_residues
MMTQAQREAAYERVRRELGIDRVGTAPDAPVLRSRQGGAPARPAYALPVEAEIHGAQLYEYEIWGRSGLDLRTRSFITVA
VLTALGREDQLYRYVNSALNIGITPEEIHETLLHAGVYSGLPAWENAAGVAGEVFVARGLVPAGSGAPVEPKPAMDHEER
RAARNRVVAALGVGRIGLGPDAPLLEPLPGSPFPAAKPGRLAFEQELAGITADYGYGEVWGRPGLDLHTRSFITVSVLQV
QYQNDQLHIHVNNALNLGITPEAVGEAITQAGIYDGGSGWHNAMNVARHVFLQHGIVEGD

Specific function: Unknown

COG id: COG0599

COG function: function code S; Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003779
- InterPro:   IPR012788 [H]

Pfam domain/function: PF02627 CMD [H]

EC number: =4.1.1.44 [H]

Molecular weight: Translated: 32240; Mature: 32240

Theoretical pI: Translated: 5.78; Mature: 5.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMTQAQREAAYERVRRELGIDRVGTAPDAPVLRSRQGGAPARPAYALPVEAEIHGAQLYE
CCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCCCCCCCCCEECCEEEEECCCEEEE
YEIWGRSGLDLRTRSFITVAVLTALGREDQLYRYVNSALNIGITPEEIHETLLHAGVYSG
EEEECCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCC
LPAWENAAGVAGEVFVARGLVPAGSGAPVEPKPAMDHEERRAARNRVVAALGVGRIGLGP
CCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHEEHEECCCCCCCCC
DAPLLEPLPGSPFPAAKPGRLAFEQELAGITADYGYGEVWGRPGLDLHTRSFITVSVLQV
CCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCHHCCCCCCCCCCCCEEEEEEEEE
QYQNDQLHIHVNNALNLGITPEAVGEAITQAGIYDGGSGWHNAMNVARHVFLQHGIVEGD
EECCCEEEEEECCEEECCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MMTQAQREAAYERVRRELGIDRVGTAPDAPVLRSRQGGAPARPAYALPVEAEIHGAQLYE
CCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCCCCCCCCCEECCEEEEECCCEEEE
YEIWGRSGLDLRTRSFITVAVLTALGREDQLYRYVNSALNIGITPEEIHETLLHAGVYSG
EEEECCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCC
LPAWENAAGVAGEVFVARGLVPAGSGAPVEPKPAMDHEERRAARNRVVAALGVGRIGLGP
CCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHEEHEECCCCCCCCC
DAPLLEPLPGSPFPAAKPGRLAFEQELAGITADYGYGEVWGRPGLDLHTRSFITVSVLQV
CCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCHHCCCCCCCCCCCCEEEEEEEEE
QYQNDQLHIHVNNALNLGITPEAVGEAITQAGIYDGGSGWHNAMNVARHVFLQHGIVEGD
EECCCEEEEEECCEEECCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2298704 [H]