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The map label for this gene is yecD [C]

Identifier: 158316479

GI number: 158316479

Start: 5628612

End: 5629202

Strand: Reverse

Name: yecD [C]

Synonym: Franean1_4714

Alternate gene names: 158316479

Gene position: 5629202-5628612 (Counterclockwise)

Preceding gene: 158316480

Following gene: 158316478

Centisome position: 62.67

GC content: 68.02

Gene sequence:

>591_bases
ATGGCCGATGCCAGCGCACCGACGACGCAGCTGACCGCGTTCGTCGCCCTGGACTTCACCGGGTACATCGTCGAGCGCTT
CAGCCACGACCCGGCCGTCGCGGAGCGGGCCTCCCATGCGATGACATTGGCCCGCCGGGCCGGCGTGCCGGTCTTTCATG
TGGTGCCGGAGTCGATGGTGGACGACATCCATCCGTTGCTGGCGCCGATCGACGGCGAGCCCGTCCTGAGCAAGACGACC
ATCGGCGCTTTCGCCACCACCGGTCTGCACGACCTGCTACAGCGAGCGGGGATCAGGCAGATCGTCATCGCGGGTGTGGC
GACCGCGGGGACCGTCCTGTCCACCGCCAGGTGGGCGTTCGACGTCGGCTACCAGGTCATTGTCTGCTCGGACGCTTGCG
ACGACCCCGAACCGGAGGCGCACGCCGCGCTCGTCGACACGGCTGTCTTCCCGCAGAGCTGGATCGGGCTGTGGCGGATC
GCAAACGTGCTGCCGACCGCCGAGATCGCCGTGCTCCAGACAAGGGAGTCCGCAGGCACGGGGGTCCAACCATTCGAAGC
TCCGTTCACCCAGGGAGGTACGTCGGGATGA

Upstream 100 bases:

>100_bases
GAGCCGCCGGCGGGCCGACAGTTCACCCCTTGCACATTTCCGCAAACTTGTATACAACCTGACCTGAAGGTTGTATACAA
GCAATGTGAAAGGGGAGTCG

Downstream 100 bases:

>100_bases
TGACCCAGGCGCAGCGCGAGGCGGCCTATGAACGGGTCCGCCGAGAGCTCGGCATCGACCGGGTCGGTACCGCGCCCGAC
GCACCGGTGCTGCGGTCCCG

Product: isochorismatase hydrolase

Products: NA

Alternate protein names: Isochorismatase Family Protein; Isochorismatase-Family Hydrolase; Hydrolase Protein; Isochorismatase Hydrolase Family Protein; Isochorismatase; Isochorismatase Family Hydrolase; Hydrolase; Pyrimidine Utilization Protein B

Number of amino acids: Translated: 196; Mature: 195

Protein sequence:

>196_residues
MADASAPTTQLTAFVALDFTGYIVERFSHDPAVAERASHAMTLARRAGVPVFHVVPESMVDDIHPLLAPIDGEPVLSKTT
IGAFATTGLHDLLQRAGIRQIVIAGVATAGTVLSTARWAFDVGYQVIVCSDACDDPEPEAHAALVDTAVFPQSWIGLWRI
ANVLPTAEIAVLQTRESAGTGVQPFEAPFTQGGTSG

Sequences:

>Translated_196_residues
MADASAPTTQLTAFVALDFTGYIVERFSHDPAVAERASHAMTLARRAGVPVFHVVPESMVDDIHPLLAPIDGEPVLSKTT
IGAFATTGLHDLLQRAGIRQIVIAGVATAGTVLSTARWAFDVGYQVIVCSDACDDPEPEAHAALVDTAVFPQSWIGLWRI
ANVLPTAEIAVLQTRESAGTGVQPFEAPFTQGGTSG
>Mature_195_residues
ADASAPTTQLTAFVALDFTGYIVERFSHDPAVAERASHAMTLARRAGVPVFHVVPESMVDDIHPLLAPIDGEPVLSKTTI
GAFATTGLHDLLQRAGIRQIVIAGVATAGTVLSTARWAFDVGYQVIVCSDACDDPEPEAHAALVDTAVFPQSWIGLWRIA
NVLPTAEIAVLQTRESAGTGVQPFEAPFTQGGTSG

Specific function: Unknown

COG id: COG1335

COG function: function code Q; Amidases related to nicotinamidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20620; Mature: 20488

Theoretical pI: Translated: 4.50; Mature: 4.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADASAPTTQLTAFVALDFTGYIVERFSHDPAVAERASHAMTLARRAGVPVFHVVPESMV
CCCCCCCHHHHHEEEHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCEEEECCHHHH
DDIHPLLAPIDGEPVLSKTTIGAFATTGLHDLLQRAGIRQIVIAGVATAGTVLSTARWAF
HHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
DVGYQVIVCSDACDDPEPEAHAALVDTAVFPQSWIGLWRIANVLPTAEIAVLQTRESAGT
HCCCEEEEECCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHCCCCCEEEEEECCCCCC
GVQPFEAPFTQGGTSG
CCCCCCCCCCCCCCCC
>Mature Secondary Structure 
ADASAPTTQLTAFVALDFTGYIVERFSHDPAVAERASHAMTLARRAGVPVFHVVPESMV
CCCCCCHHHHHEEEHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCEEEECCHHHH
DDIHPLLAPIDGEPVLSKTTIGAFATTGLHDLLQRAGIRQIVIAGVATAGTVLSTARWAF
HHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
DVGYQVIVCSDACDDPEPEAHAALVDTAVFPQSWIGLWRIANVLPTAEIAVLQTRESAGT
HCCCEEEEECCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHCCCCCEEEEEECCCCCC
GVQPFEAPFTQGGTSG
CCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA