Click here to switch to the map view.

The map label for this gene is 158316380

Identifier: 158316380

GI number: 158316380

Start: 5495214

End: 5496455

Strand: Reverse

Name: 158316380

Synonym: Franean1_4611

Alternate gene names: NA

Gene position: 5496455-5495214 (Counterclockwise)

Preceding gene: 158316381

Following gene: 158316378

Centisome position: 61.19

GC content: 64.41

Gene sequence:

>1242_bases
ATGGCCGCGCGCCAGACTGTGACGGATGTGGACTCGTTCAGCAAGGAGCTGATGACGGCGAGTCCGGATCTGTTGGGCTC
GATGGTGAAGGCGTTCGCGGAGGCGTTGATGGGCGCCGAGGTGGACGGGATCTGCAACGCGGAATATGGGGAGATTTCCC
CCGAGCGGGTGAACCGGCGGAACGGGTATCGGGCGCGGGAGTGGGACACCCGTGCCGGGACGATCGAGCTGGCGGTGCCG
AAGCTGCGGCAGGGATCGTATTTTCCGGAATGGCTGCTGACTCGGCGCCGGCGTGCCGAGCAGGCACTGATCTCGGTGGT
CGCCACCTCCTATCTGCTGGGGGTGTCGACCAGGCGGGTCGACAAACTCGTTGAACAACTCGGGGTAGCGCATATCTCGA
AATCGCAGGTATCGGTACTGGCGAAGCATCTCGACACCCAGGTCGAGGCGTTCCGGTCCCGGCCGTTGGACGCCGGTCCG
TACCGGTTCGTCCAGGCGGACGCGTTGACGATGAAGGTCCGTGAGGACGGCCGTGTGATCAATGTGCACTGCCTGCTTGC
CGTGGGGGTCAACGGTGACGGGCACCGGGAGATCCTCGGCCTCGACGTTGTGAGCAGCGAGGACGGTGCCGGCTGGCTGG
CGTTCTTCCGCGGCCTGGTCGCCCGAGGCCTGTCCGGGGTGCGGCTGGTGACCTCCGATGCCCACCGGGGACTGGTCAAC
GCGATCGGCTCCACACTGCCCGGTGCGTCGTGGCAGAGATGTCGGACTCATTACCTTCGGGACTTGCTCACGATGACACC
AAAATCATCGCAGCCGTGGGTCGCCACGCTCGTGAGAACTGTCTTCGACCAGGCCGACGCCAATGAGGTCGGCGGGCAGT
TCGACCGGGTCACCGAAGCCCTCTCCGAGAAACTCCCGAAGGCCGCCGACCATCTCTCCGGCGCAAAAGCCGACCTACTC
GCGTTCACGACCTACCCGCGGGAGGTCTGGCGGCAGATCTGGTCGTCGAACCCGCAGGAACGACTGAACAAGGAAATCCG
CCGCCGTACCGACGTCGTCGGTATCTTCCCCGACCGTGACGCCATCATACGTCTCGTCGGCGCGGTCCTCGCGGAACAAC
ACGACGAGTGGATCGAGACCCACCGCTACTTCGGCCTCGAAATCCTCGCGAAAGTCGACGCCACGAACAAGAAATCCGAC
ACACCTGAGATCGGCGTGACACCCGAAGCTCTGACCGCATAA

Upstream 100 bases:

>100_bases
GATCGTCGAGCGACTCGCCGGAGTGGCGGTCCGTGACGTAGAGCGACCACCGCGTGATCCTTTTCGAGAAACGTGCGAAG
CAACTCGATGAGGAGACGCG

Downstream 100 bases:

>100_bases
CCTTCAACCAGGATCACGCGGCATCACGCTCCGTACACCACCACCCTGGGCATGACCATGACGTGGGCGAGCCCGACGCG
CGCGCCCTCGATCTGCCGGT

Product: transposase mutator type

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 413; Mature: 412

Protein sequence:

>413_residues
MAARQTVTDVDSFSKELMTASPDLLGSMVKAFAEALMGAEVDGICNAEYGEISPERVNRRNGYRAREWDTRAGTIELAVP
KLRQGSYFPEWLLTRRRRAEQALISVVATSYLLGVSTRRVDKLVEQLGVAHISKSQVSVLAKHLDTQVEAFRSRPLDAGP
YRFVQADALTMKVREDGRVINVHCLLAVGVNGDGHREILGLDVVSSEDGAGWLAFFRGLVARGLSGVRLVTSDAHRGLVN
AIGSTLPGASWQRCRTHYLRDLLTMTPKSSQPWVATLVRTVFDQADANEVGGQFDRVTEALSEKLPKAADHLSGAKADLL
AFTTYPREVWRQIWSSNPQERLNKEIRRRTDVVGIFPDRDAIIRLVGAVLAEQHDEWIETHRYFGLEILAKVDATNKKSD
TPEIGVTPEALTA

Sequences:

>Translated_413_residues
MAARQTVTDVDSFSKELMTASPDLLGSMVKAFAEALMGAEVDGICNAEYGEISPERVNRRNGYRAREWDTRAGTIELAVP
KLRQGSYFPEWLLTRRRRAEQALISVVATSYLLGVSTRRVDKLVEQLGVAHISKSQVSVLAKHLDTQVEAFRSRPLDAGP
YRFVQADALTMKVREDGRVINVHCLLAVGVNGDGHREILGLDVVSSEDGAGWLAFFRGLVARGLSGVRLVTSDAHRGLVN
AIGSTLPGASWQRCRTHYLRDLLTMTPKSSQPWVATLVRTVFDQADANEVGGQFDRVTEALSEKLPKAADHLSGAKADLL
AFTTYPREVWRQIWSSNPQERLNKEIRRRTDVVGIFPDRDAIIRLVGAVLAEQHDEWIETHRYFGLEILAKVDATNKKSD
TPEIGVTPEALTA
>Mature_412_residues
AARQTVTDVDSFSKELMTASPDLLGSMVKAFAEALMGAEVDGICNAEYGEISPERVNRRNGYRAREWDTRAGTIELAVPK
LRQGSYFPEWLLTRRRRAEQALISVVATSYLLGVSTRRVDKLVEQLGVAHISKSQVSVLAKHLDTQVEAFRSRPLDAGPY
RFVQADALTMKVREDGRVINVHCLLAVGVNGDGHREILGLDVVSSEDGAGWLAFFRGLVARGLSGVRLVTSDAHRGLVNA
IGSTLPGASWQRCRTHYLRDLLTMTPKSSQPWVATLVRTVFDQADANEVGGQFDRVTEALSEKLPKAADHLSGAKADLLA
FTTYPREVWRQIWSSNPQERLNKEIRRRTDVVGIFPDRDAIIRLVGAVLAEQHDEWIETHRYFGLEILAKVDATNKKSDT
PEIGVTPEALTA

Specific function: Required for the transposition of the insertion element [H]

COG id: COG3328

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase mutator family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001207 [H]

Pfam domain/function: PF00872 Transposase_mut [H]

EC number: NA

Molecular weight: Translated: 45728; Mature: 45597

Theoretical pI: Translated: 7.69; Mature: 7.69

Prosite motif: PS01007 TRANSPOSASE_MUTATOR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAARQTVTDVDSFSKELMTASPDLLGSMVKAFAEALMGAEVDGICNAEYGEISPERVNRR
CCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHC
NGYRAREWDTRAGTIELAVPKLRQGSYFPEWLLTRRRRAEQALISVVATSYLLGVSTRRV
CCCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DKLVEQLGVAHISKSQVSVLAKHLDTQVEAFRSRPLDAGPYRFVQADALTMKVREDGRVI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEHHHEEEEEECCCCEE
NVHCLLAVGVNGDGHREILGLDVVSSEDGAGWLAFFRGLVARGLSGVRLVTSDAHRGLVN
EEEEEEEEECCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHCCCCCCEEEECHHHHHHHH
AIGSTLPGASWQRCRTHYLRDLLTMTPKSSQPWVATLVRTVFDQADANEVGGQFDRVTEA
HHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCHHHHCHHHHHHHHH
LSEKLPKAADHLSGAKADLLAFTTYPREVWRQIWSSNPQERLNKEIRRRTDVVGIFPDRD
HHHHCCHHHHHCCCCCHHHHEEECCHHHHHHHHHCCCHHHHHHHHHHHHCCEEEECCCHH
AIIRLVGAVLAEQHDEWIETHRYFGLEILAKVDATNKKSDTPEIGVTPEALTA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCHHHCC
>Mature Secondary Structure 
AARQTVTDVDSFSKELMTASPDLLGSMVKAFAEALMGAEVDGICNAEYGEISPERVNRR
CCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHC
NGYRAREWDTRAGTIELAVPKLRQGSYFPEWLLTRRRRAEQALISVVATSYLLGVSTRRV
CCCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DKLVEQLGVAHISKSQVSVLAKHLDTQVEAFRSRPLDAGPYRFVQADALTMKVREDGRVI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEHHHEEEEEECCCCEE
NVHCLLAVGVNGDGHREILGLDVVSSEDGAGWLAFFRGLVARGLSGVRLVTSDAHRGLVN
EEEEEEEEECCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHCCCCCCEEEECHHHHHHHH
AIGSTLPGASWQRCRTHYLRDLLTMTPKSSQPWVATLVRTVFDQADANEVGGQFDRVTEA
HHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCHHHHCHHHHHHHHH
LSEKLPKAADHLSGAKADLLAFTTYPREVWRQIWSSNPQERLNKEIRRRTDVVGIFPDRD
HHHHCCHHHHHCCCCCHHHHEEECCHHHHHHHHHCCCHHHHHHHHHHHHCCEEEECCCHH
AIIRLVGAVLAEQHDEWIETHRYFGLEILAKVDATNKKSDTPEIGVTPEALTA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1663885; 12788972 [H]