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The map label for this gene is frc [H]

Identifier: 158316378

GI number: 158316378

Start: 5492458

End: 5494536

Strand: Reverse

Name: frc [H]

Synonym: Franean1_4609

Alternate gene names: 158316378

Gene position: 5494536-5492458 (Counterclockwise)

Preceding gene: 158316380

Following gene: 158316377

Centisome position: 61.17

GC content: 73.45

Gene sequence:

>2079_bases
GTGACCGCCCCGACCGCCCGGTGGCCACCAACGAGCGGCTCGTCTACTGCTCGCTCCCGGGGTTCGCCGGCGACGATCCC
AAGGCCTCGCTCGCCGCGTGGGAAGGCATCGTCCAGACCGCCGTCGCCGGTTACCGTCCGCTGCGGGAGCACTGGGATCC
CTCGGGCCGCCGGCGGGTGGGAGGTACGGGACCCGACGGCGCCGCTGTTCACCCCGATCACGACGGCGTCCAACTTCGGT
GCCCTGATGGGGGCCGTGTCGGTCGTCATGGCACTGATCGCGCGGGAACGCTCGGGCCGGGGACAGCGGATCGAGATCCC
GCTCGCGGAGGCGTTCGCCGAGGCCTACAGCACCATGCTGGGGATGCGGGTGTACGAGAACCCGCTGATGGGTGACAGCC
ACCTGCTGCGTGACCTCACCTACCAGTGCGCCGACGGCGGGATCATCGACCTCTCGCCGTACTCCAAGTTCGTCATCCCC
CTCCTCGCGGCGGCGGGGGTGGCCGAGGAGTGGGAGCGCCTGGGCCTCATCGACGTCGCGGCCCGCGACTTCTCGCTGGA
GCGTCGCGACCAGGCCATGGCGATGTTCGCGGACCTGGTCCGCAGCCGGCCGGCGTCCTGGTGGGACGAGGTGGCGGCCA
GGGCGCGGATGCCGGTGCCGATGGTCCGGACGCCCGCCGAGTGGGTCGCCACCGAGCAGGCGGTGCGGTCCGGGACCGTC
CTGACGCTCGACGACCCGCTGGCCGGCCCGACCATGATGCCCGGCCGCGGCTTCGACCTGTCCCGGCCGCCCGCCCCGCC
ACCTGCCCGACCAGGACCGCGACGCGCTGCTCGCCGAGCTGCGCGGCGCGCCCGCCCGCGTCGGCCACCCGGCCCTGCCG
GTGGGTTCGGCGGGTTCGGGTGCCGCGGGTGTTGCGGTGCCGCGGTGGATCTCCCGCTCAGCGGCTTCACCGCGCTGGAC
GTCAGCAGCGCGCCGGGGTCCCGGCTCACCGCCGAGCTGATCCGGCGCTCGGACGCGCTGGTCACCAACTTCACGCCGAT
GTCGCAGGCCCGGTACGGCATCGACTACGAGCGTGTCGGCGCGCTGAACCCCGACCTGGTGCACTGCTCCATCACCGCCT
ATGGCCTGAGTGGCCCGTGGGCGCACCGCCGGGGCTACGAGAACCAGTGCAACGCGGCCACGGGCATGAGCTGGCGGTAC
GGGTACCGCTTCGGCTGGACGCTCTACCAGCCGACACCGATCAACGACGCCGGCACCGGCATTCTCGGCGCCTACGCCGT
GGCCGTCGCTCTCTTCGCCCGGCTGAAGGGTGGGGGCGGGCAGCAGGTGGGCGCGTCGCTCGCCCAGGCGTCGACGTTCC
ACCAGGCCCCGTACCTCGTCGCGGAGGCGCGGGGGAGTACGGCGGCGCGGGGGAGTGCGGACGGGCCGGACGCGCTGCGC
AACGAGTACGGCAGCAGCGCGCTGAACCGCTTCTACCAGGCGCGGGACGGCTGGTTCTTCCTGGCCGCTCGGCCGGGGGA
GCTGGCAGCCCTCCTGCGCGTGGCCGGTCTCGACGATCGGACGAGTCCCGGCGATTGGGACGGTGCCGCTGACAGGCACG
GTGCCGGTGATCGGGACGGTACTGACGATCGGGCCGGTCGCGCTGGCCAGGACCGCGCCGAGAGCTGGCCGGACCCGGGC
GGCCTGTTGGCCCGCGACCTGGAGGCGCGCTTCGCGCAGCGGCAGGCCGCCTCCTGGATCGAGCGGCTGGCGTCCGCCGG
CATCGCCGCGCACGTGGTCGTCTCCATCGACCAGGCGGTCGACTACCTGCACCGCCGGGGCGTGGTCTACTTCGAGCGCG
GCCTGGGCGGGACCGACGTGCCCAAGCCGGGCATCGGCCGGTGGCTGTCGGAGACCCCGCCGGTGGTGGGCACGAACCCC
GGGCCGATCGGCTCCCAGGCCGTCGAGATCCTCGCTGGCCTCGGGCTGACCGAGCCCGAGATGAAGGAGCTGGCCGAGGC
GAACGTCCTCTGCCTTGCCGGACGGGCTGCCGGAGCTGCGCAGACTCACCTGACCGAGGGAGGTGTCTGTTTCGTTTGA

Upstream 100 bases:

>100_bases
TGTCTCGAAGCTGGCGCCTCCGTGGCGGTGGCCGTACTCCAGGCCGATCTGCGCGAACACGCCCGGCATCGAGTCCTTGC
CCACCCTGCCCTCAAGCGGC

Downstream 100 bases:

>100_bases
ACTTTGCGAAGAGGTAGGCCGCTCGCCCGAGGCTCGTGTGGTATGCGCGAACAGCAGACAGGGAATTTTTTGGGCCTACC
TCTGCGGATTCGACGGTGCC

Product: L-carnitine dehydratase/bile acid-inducible protein F

Products: NA

Alternate protein names: Formyl-CoA transferase [H]

Number of amino acids: Translated: 692; Mature: 691

Protein sequence:

>692_residues
MTAPTARWPPTSGSSTARSRGSPATIPRPRSPRGKASSRPPSPVTVRCGSTGIPRAAGGWEVRDPTAPLFTPITTASNFG
ALMGAVSVVMALIARERSGRGQRIEIPLAEAFAEAYSTMLGMRVYENPLMGDSHLLRDLTYQCADGGIIDLSPYSKFVIP
LLAAAGVAEEWERLGLIDVAARDFSLERRDQAMAMFADLVRSRPASWWDEVAARARMPVPMVRTPAEWVATEQAVRSGTV
LTLDDPLAGPTMMPGRGFDLSRPPAPPPARPGPRRAARRAARRARPRRPPGPAGGFGGFGCRGCCGAAVDLPLSGFTALD
VSSAPGSRLTAELIRRSDALVTNFTPMSQARYGIDYERVGALNPDLVHCSITAYGLSGPWAHRRGYENQCNAATGMSWRY
GYRFGWTLYQPTPINDAGTGILGAYAVAVALFARLKGGGGQQVGASLAQASTFHQAPYLVAEARGSTAARGSADGPDALR
NEYGSSALNRFYQARDGWFFLAARPGELAALLRVAGLDDRTSPGDWDGAADRHGAGDRDGTDDRAGRAGQDRAESWPDPG
GLLARDLEARFAQRQAASWIERLASAGIAAHVVVSIDQAVDYLHRRGVVYFERGLGGTDVPKPGIGRWLSETPPVVGTNP
GPIGSQAVEILAGLGLTEPEMKELAEANVLCLAGRAAGAAQTHLTEGGVCFV

Sequences:

>Translated_692_residues
MTAPTARWPPTSGSSTARSRGSPATIPRPRSPRGKASSRPPSPVTVRCGSTGIPRAAGGWEVRDPTAPLFTPITTASNFG
ALMGAVSVVMALIARERSGRGQRIEIPLAEAFAEAYSTMLGMRVYENPLMGDSHLLRDLTYQCADGGIIDLSPYSKFVIP
LLAAAGVAEEWERLGLIDVAARDFSLERRDQAMAMFADLVRSRPASWWDEVAARARMPVPMVRTPAEWVATEQAVRSGTV
LTLDDPLAGPTMMPGRGFDLSRPPAPPPARPGPRRAARRAARRARPRRPPGPAGGFGGFGCRGCCGAAVDLPLSGFTALD
VSSAPGSRLTAELIRRSDALVTNFTPMSQARYGIDYERVGALNPDLVHCSITAYGLSGPWAHRRGYENQCNAATGMSWRY
GYRFGWTLYQPTPINDAGTGILGAYAVAVALFARLKGGGGQQVGASLAQASTFHQAPYLVAEARGSTAARGSADGPDALR
NEYGSSALNRFYQARDGWFFLAARPGELAALLRVAGLDDRTSPGDWDGAADRHGAGDRDGTDDRAGRAGQDRAESWPDPG
GLLARDLEARFAQRQAASWIERLASAGIAAHVVVSIDQAVDYLHRRGVVYFERGLGGTDVPKPGIGRWLSETPPVVGTNP
GPIGSQAVEILAGLGLTEPEMKELAEANVLCLAGRAAGAAQTHLTEGGVCFV
>Mature_691_residues
TAPTARWPPTSGSSTARSRGSPATIPRPRSPRGKASSRPPSPVTVRCGSTGIPRAAGGWEVRDPTAPLFTPITTASNFGA
LMGAVSVVMALIARERSGRGQRIEIPLAEAFAEAYSTMLGMRVYENPLMGDSHLLRDLTYQCADGGIIDLSPYSKFVIPL
LAAAGVAEEWERLGLIDVAARDFSLERRDQAMAMFADLVRSRPASWWDEVAARARMPVPMVRTPAEWVATEQAVRSGTVL
TLDDPLAGPTMMPGRGFDLSRPPAPPPARPGPRRAARRAARRARPRRPPGPAGGFGGFGCRGCCGAAVDLPLSGFTALDV
SSAPGSRLTAELIRRSDALVTNFTPMSQARYGIDYERVGALNPDLVHCSITAYGLSGPWAHRRGYENQCNAATGMSWRYG
YRFGWTLYQPTPINDAGTGILGAYAVAVALFARLKGGGGQQVGASLAQASTFHQAPYLVAEARGSTAARGSADGPDALRN
EYGSSALNRFYQARDGWFFLAARPGELAALLRVAGLDDRTSPGDWDGAADRHGAGDRDGTDDRAGRAGQDRAESWPDPGG
LLARDLEARFAQRQAASWIERLASAGIAAHVVVSIDQAVDYLHRRGVVYFERGLGGTDVPKPGIGRWLSETPPVVGTNPG
PIGSQAVEILAGLGLTEPEMKELAEANVLCLAGRAAGAAQTHLTEGGVCFV

Specific function: Catalyzes the transfer of the CoA moiety from formyl-CoA to oxalate [H]

COG id: COG1804

COG function: function code C; Predicted acyl-CoA transferases/carnitine dehydratase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CaiB/BaiF CoA-transferase family [H]

Homologues:

Organism=Homo sapiens, GI300863128, Length=347, Percent_Identity=21.3256484149856, Blast_Score=71, Evalue=3e-12,
Organism=Homo sapiens, GI300863124, Length=277, Percent_Identity=21.2996389891697, Blast_Score=69, Evalue=1e-11,
Organism=Escherichia coli, GI1788717, Length=132, Percent_Identity=31.8181818181818, Blast_Score=67, Evalue=4e-12,
Organism=Drosophila melanogaster, GI24648431, Length=118, Percent_Identity=34.7457627118644, Blast_Score=77, Evalue=3e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003673
- InterPro:   IPR017659 [H]

Pfam domain/function: PF02515 CoA_transf_3 [H]

EC number: =2.8.3.16 [H]

Molecular weight: Translated: 73335; Mature: 73203

Theoretical pI: Translated: 9.02; Mature: 9.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAPTARWPPTSGSSTARSRGSPATIPRPRSPRGKASSRPPSPVTVRCGSTGIPRAAGGW
CCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCC
EVRDPTAPLFTPITTASNFGALMGAVSVVMALIARERSGRGQRIEIPLAEAFAEAYSTML
CCCCCCCCCEECHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEECHHHHHHHHHHHHHH
GMRVYENPLMGDSHLLRDLTYQCADGGIIDLSPYSKFVIPLLAAAGVAEEWERLGLIDVA
HHHHHCCCCCCHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHCHHHHHHHCCHHHHH
ARDFSLERRDQAMAMFADLVRSRPASWWDEVAARARMPVPMVRTPAEWVATEQAVRSGTV
HHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCE
LTLDDPLAGPTMMPGRGFDLSRPPAPPPARPGPRRAARRAARRARPRRPPGPAGGFGGFG
EEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCC
CRGCCGAAVDLPLSGFTALDVSSAPGSRLTAELIRRSDALVTNFTPMSQARYGIDYERVG
CHHHCCCHHCCCCCCCEEEECCCCCCHHHHHHHHHHCCCEEECCCCHHHHHCCCCHHHHC
ALNPDLVHCSITAYGLSGPWAHRRGYENQCNAATGMSWRYGYRFGWTLYQPTPINDAGTG
CCCCCEEEEEEEEECCCCCHHHHCCCCCCCCCCCCCCEECCEEEEEEEECCCCCCCCCCH
ILGAYAVAVALFARLKGGGGQQVGASLAQASTFHQAPYLVAEARGSTAARGSADGPDALR
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCHHHHH
NEYGSSALNRFYQARDGWFFLAARPGELAALLRVAGLDDRTSPGDWDGAADRHGAGDRDG
HHHCHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC
TDDRAGRAGQDRAESWPDPGGLLARDLEARFAQRQAASWIERLASAGIAAHVVVSIDQAV
CCHHCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
DYLHRRGVVYFERGLGGTDVPKPGIGRWLSETPPVVGTNPGPIGSQAVEILAGLGLTEPE
HHHHHCCCEEEECCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCHH
MKELAEANVLCLAGRAAGAAQTHLTEGGVCFV
HHHHHHCCEEEEECCCCCCHHHHCCCCCEEEC
>Mature Secondary Structure 
TAPTARWPPTSGSSTARSRGSPATIPRPRSPRGKASSRPPSPVTVRCGSTGIPRAAGGW
CCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCC
EVRDPTAPLFTPITTASNFGALMGAVSVVMALIARERSGRGQRIEIPLAEAFAEAYSTML
CCCCCCCCCEECHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEECHHHHHHHHHHHHHH
GMRVYENPLMGDSHLLRDLTYQCADGGIIDLSPYSKFVIPLLAAAGVAEEWERLGLIDVA
HHHHHCCCCCCHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHCHHHHHHHCCHHHHH
ARDFSLERRDQAMAMFADLVRSRPASWWDEVAARARMPVPMVRTPAEWVATEQAVRSGTV
HHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCE
LTLDDPLAGPTMMPGRGFDLSRPPAPPPARPGPRRAARRAARRARPRRPPGPAGGFGGFG
EEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCC
CRGCCGAAVDLPLSGFTALDVSSAPGSRLTAELIRRSDALVTNFTPMSQARYGIDYERVG
CHHHCCCHHCCCCCCCEEEECCCCCCHHHHHHHHHHCCCEEECCCCHHHHHCCCCHHHHC
ALNPDLVHCSITAYGLSGPWAHRRGYENQCNAATGMSWRYGYRFGWTLYQPTPINDAGTG
CCCCCEEEEEEEEECCCCCHHHHCCCCCCCCCCCCCCEECCEEEEEEEECCCCCCCCCCH
ILGAYAVAVALFARLKGGGGQQVGASLAQASTFHQAPYLVAEARGSTAARGSADGPDALR
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCHHHHH
NEYGSSALNRFYQARDGWFFLAARPGELAALLRVAGLDDRTSPGDWDGAADRHGAGDRDG
HHHCHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC
TDDRAGRAGQDRAESWPDPGGLLARDLEARFAQRQAASWIERLASAGIAAHVVVSIDQAV
CCHHCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
DYLHRRGVVYFERGLGGTDVPKPGIGRWLSETPPVVGTNPGPIGSQAVEILAGLGLTEPE
HHHHHCCCEEEECCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCHH
MKELAEANVLCLAGRAAGAAQTHLTEGGVCFV
HHHHHHCCEEEEECCCCCCHHHHCCCCCEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12000953 [H]