Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

Click here to switch to the map view.

The map label for this gene is 158316377

Identifier: 158316377

GI number: 158316377

Start: 5491541

End: 5492269

Strand: Reverse

Name: 158316377

Synonym: Franean1_4608

Alternate gene names: NA

Gene position: 5492269-5491541 (Counterclockwise)

Preceding gene: 158316378

Following gene: 158316375

Centisome position: 61.15

GC content: 59.81

Gene sequence:

>729_bases
GTGCCCGATGAGATCTTCGCTCATCCCCGCCTTGCGCCCATCTATGACGCTCTCGATAGAGGCCGCGATGATTTGACGGC
CTACCTAGAAATCGTCGATGAGCTAGGCGCTGACCGTGTCCTTGACGTCGGTTGCGGGACGGGATGCCTGGCGATCTTGA
TGGCTGAGAGTGGTCGTGCGGTCGTGGGTGTCGACCCGGCCGAAGCATCGCTTGAGGTCGCGAAGTCGAAGGATCGAGCC
GGAAAGATCACCTGGTTGCATGGCGATGCCACGACTGTACCGACGACCAATATTGATCTCGCGGTGATGGCGGGGAATGT
AGCGCAAGTTTTTCTCACTGATGACGAGTGGATCCGGACTCTCCAGGCCATCCGGGCCGCACTTCGCCCAGATGGCTACC
TCGTTTTCGAAACAAGGCGCCCTGAACGTCGGGCTTGGGATGAATGGGCTGCTGGTCCTGGTCAGGTCATCGTCGACATT
CCAGAGGTCGGAGTGGTGGAGCGGCGCTTTGAGGTTACCGACGTGAGCCTTCCGTTCGTCTCTTTCCGCTATGTATACAG
GTTCCTGAAGGACGGATCGGTCGTCACCTCGGACTCGACCCTTCGGTTTCGCGGCAGGGAGGAAGTGGAGACGAGCCTGG
TCGCTCATGGCTATCGAGTGCTGGACGTGCGAGAAGCCCCTGATCGCCCAGGTCGCGAGTTCGTGTTTATCGCACAGCGC
GCGACCTGA

Upstream 100 bases:

>100_bases
TTCGACGGTGCCGGAAGTCCGGACTGTCTGGAGCCGTGCTGAGACAGCGGTGGCCGATATTTCGGTCGCCGGAGTCCTCG
ACTACGGGTACGGTCGCCTG

Downstream 100 bases:

>100_bases
TCGCGACGTGGCTCCCGGGGCCGACCGCGGGAACCACGTCGCCGGGCGCGCGCCAGCGGCAGCGTGACGCCCTGCAGGAT
GCCGGCGTAGACCACGGTCC

Product: type 11 methyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 242; Mature: 241

Protein sequence:

>242_residues
MPDEIFAHPRLAPIYDALDRGRDDLTAYLEIVDELGADRVLDVGCGTGCLAILMAESGRAVVGVDPAEASLEVAKSKDRA
GKITWLHGDATTVPTTNIDLAVMAGNVAQVFLTDDEWIRTLQAIRAALRPDGYLVFETRRPERRAWDEWAAGPGQVIVDI
PEVGVVERRFEVTDVSLPFVSFRYVYRFLKDGSVVTSDSTLRFRGREEVETSLVAHGYRVLDVREAPDRPGREFVFIAQR
AT

Sequences:

>Translated_242_residues
MPDEIFAHPRLAPIYDALDRGRDDLTAYLEIVDELGADRVLDVGCGTGCLAILMAESGRAVVGVDPAEASLEVAKSKDRA
GKITWLHGDATTVPTTNIDLAVMAGNVAQVFLTDDEWIRTLQAIRAALRPDGYLVFETRRPERRAWDEWAAGPGQVIVDI
PEVGVVERRFEVTDVSLPFVSFRYVYRFLKDGSVVTSDSTLRFRGREEVETSLVAHGYRVLDVREAPDRPGREFVFIAQR
AT
>Mature_241_residues
PDEIFAHPRLAPIYDALDRGRDDLTAYLEIVDELGADRVLDVGCGTGCLAILMAESGRAVVGVDPAEASLEVAKSKDRAG
KITWLHGDATTVPTTNIDLAVMAGNVAQVFLTDDEWIRTLQAIRAALRPDGYLVFETRRPERRAWDEWAAGPGQVIVDIP
EVGVVERRFEVTDVSLPFVSFRYVYRFLKDGSVVTSDSTLRFRGREEVETSLVAHGYRVLDVREAPDRPGREFVFIAQRA
T

Specific function: Could be a S-adenosyl-L-methionine-dependent methyltransferase [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. YrrT family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013216 [H]

Pfam domain/function: PF08241 Methyltransf_11 [H]

EC number: NA

Molecular weight: Translated: 26864; Mature: 26732

Theoretical pI: Translated: 4.60; Mature: 4.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPDEIFAHPRLAPIYDALDRGRDDLTAYLEIVDELGADRVLDVGCGTGCLAILMAESGRA
CCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHCCCCCEEECCCCHHEEEEEEECCCCE
VVGVDPAEASLEVAKSKDRAGKITWLHGDATTVPTTNIDLAVMAGNVAQVFLTDDEWIRT
EEEECCCHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCEEEEEECCEEEEEEECHHHHHH
LQAIRAALRPDGYLVFETRRPERRAWDEWAAGPGQVIVDIPEVGVVERRFEVTDVSLPFV
HHHHHHHHCCCCEEEEECCCCHHHCHHHHCCCCCCEEEECCCCCEEEEEEEEEEECCCHH
SFRYVYRFLKDGSVVTSDSTLRFRGREEVETSLVAHGYRVLDVREAPDRPGREFVFIAQR
HHHHHHHHHHCCCEEECCCEEEECCHHHHHHHHHHCCEEEEEEECCCCCCCCEEEEEEEC
AT
CC
>Mature Secondary Structure 
PDEIFAHPRLAPIYDALDRGRDDLTAYLEIVDELGADRVLDVGCGTGCLAILMAESGRA
CCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHCCCCCEEECCCCHHEEEEEEECCCCE
VVGVDPAEASLEVAKSKDRAGKITWLHGDATTVPTTNIDLAVMAGNVAQVFLTDDEWIRT
EEEECCCHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCEEEEEECCEEEEEEECHHHHHH
LQAIRAALRPDGYLVFETRRPERRAWDEWAAGPGQVIVDIPEVGVVERRFEVTDVSLPFV
HHHHHHHHCCCCEEEEECCCCHHHCHHHHCCCCCCEEEECCCCCEEEEEEEEEEECCCHH
SFRYVYRFLKDGSVVTSDSTLRFRGREEVETSLVAHGYRVLDVREAPDRPGREFVFIAQR
HHHHHHHHHHCCCEEECCCEEEECCHHHHHHHHHHCCEEEEEEECCCCCCCCEEEEEEEC
AT
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12235376 [H]