Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

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The map label for this gene is 158316262

Identifier: 158316262

GI number: 158316262

Start: 5353769

End: 5355034

Strand: Reverse

Name: 158316262

Synonym: Franean1_4487

Alternate gene names: NA

Gene position: 5355034-5353769 (Counterclockwise)

Preceding gene: 158316264

Following gene: 158316261

Centisome position: 59.62

GC content: 68.64

Gene sequence:

>1266_bases
ATGATGCGCCGAACTCGCAATCTGGCCGTCCTGCTGGGCTTAGCCACCGCCCTGACCGCCGCCTGCGGCAGCGCCCCGAA
GTCGGACACCGGCGGGGGGGAGACGGGCGCCGCTGACGCGGCCGCACTCGGGCCGGTCGTCGCGGCCCCCACCGGCACCC
CGCTCGTCATCGGCTACATCAGCCAGGAGAACACGGCGGTGGGGTCCTACCCCGAGGCGCTCGCCTCGGCGCGGGCAGCC
GCTGACTACATCAACAAGCATCTCGGCGGAGTGCACGGGCGGCCCCTCGAACTGTCTTCCTGCGTCACTGACGGGTCGGT
CGCGACTTCGGCGAACTGCGCGCGGCAGATCGCGTCCACCTCCGGCGTGGTCGCCGCCTCAAGCAGCCTCGACTTCGGTG
CCCAGGGCGCCGTACCGGTGCTCCAGGCTGCCGGCATCCCCCGTATCGGCGGGATCGCGATCTTCCCGGAGGAGGCGTCT
TCCCCGACCGTCTTCAACTTCGCGGGCGGTTCCTTCGCGGCCTTCCCCGCGATCGACACCTTCGTCGCCACCGTCCAGAA
GGCCGGGCGCGTGAGCGCCCTGACATCCGACACCTCACCCGGCATCGCCTCGGCGAATGACCAGATCAAGACTCCGTTGC
AGCGGGACCTCGGTTACAAGGACGTGCCGATCGTCGTCGCGGCTCCGGACGCCGCCGACCTGACCGGCGCGCTGACCCAG
CTCAACGCGTCCAAGCCGGACGCGGTGGTGAGCAGCTTCGGGCAGGCGTGCGTGCGCATCATGCAGGCGAAGAAGGCGCT
CGCCCTGCCGTTCACGATGTACCACACCAGTAAATGCCTCGACGAGCGTGTGCTGCAGAGCGCGGGCGAGGCCGCCGAAG
GGCACCGCTTCAACTCCGAGACGCGGATGTGGAACGAGAAGGACGACGACGCGGCGATCTACCGGGCCGCGATGGCGAAG
TACGCGTCCGGGACGACGCTGAGCAACTACTCGACGATCGCCTTCCAGGGGATCATGAACACCTACCGCCTGCTGAACAA
GATGGACGAGGCGAGCCTCACCCCGAAGGCGCTGGTCGAGAAGATCCGCACCACCAGCGACGAGCCGAGCTTCCTCGGCT
GGACCTACACCTGTGACCCGGCGAAGCTCGCCGTGGCCGGCCAGTCCGGCCTGTGCAGCACCCTAGAGGTGATCGTCGAG
GTGAAGAACGGCGTTCCGACCACCATCTCGGACCCGATCGACGGCTCGAAGCTCCTGCGGCTCTGA

Upstream 100 bases:

>100_bases
CGGCCGAGCGCTCTGAGATTATTGTTACATAGACTGTCGAGGCTTAGAGTTCTTTTGTCGTGGCGCGTCGTTGTGTCACG
CTCGTTCCGGAGGTCATTGG

Downstream 100 bases:

>100_bases
GACCGGACCGAGGCTAACGACACATGACCGACTTTCTGCTCTACGTTCTTCTCGGTCTCGGGCCGGGCGCGGTCTACGCG
GCCCTCGGTCTCGGCGTGGT

Product: putative high-affinity branched chain amino acid ABC transporter, amino acid-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 421; Mature: 421

Protein sequence:

>421_residues
MMRRTRNLAVLLGLATALTAACGSAPKSDTGGGETGAADAAALGPVVAAPTGTPLVIGYISQENTAVGSYPEALASARAA
ADYINKHLGGVHGRPLELSSCVTDGSVATSANCARQIASTSGVVAASSSLDFGAQGAVPVLQAAGIPRIGGIAIFPEEAS
SPTVFNFAGGSFAAFPAIDTFVATVQKAGRVSALTSDTSPGIASANDQIKTPLQRDLGYKDVPIVVAAPDAADLTGALTQ
LNASKPDAVVSSFGQACVRIMQAKKALALPFTMYHTSKCLDERVLQSAGEAAEGHRFNSETRMWNEKDDDAAIYRAAMAK
YASGTTLSNYSTIAFQGIMNTYRLLNKMDEASLTPKALVEKIRTTSDEPSFLGWTYTCDPAKLAVAGQSGLCSTLEVIVE
VKNGVPTTISDPIDGSKLLRL

Sequences:

>Translated_421_residues
MMRRTRNLAVLLGLATALTAACGSAPKSDTGGGETGAADAAALGPVVAAPTGTPLVIGYISQENTAVGSYPEALASARAA
ADYINKHLGGVHGRPLELSSCVTDGSVATSANCARQIASTSGVVAASSSLDFGAQGAVPVLQAAGIPRIGGIAIFPEEAS
SPTVFNFAGGSFAAFPAIDTFVATVQKAGRVSALTSDTSPGIASANDQIKTPLQRDLGYKDVPIVVAAPDAADLTGALTQ
LNASKPDAVVSSFGQACVRIMQAKKALALPFTMYHTSKCLDERVLQSAGEAAEGHRFNSETRMWNEKDDDAAIYRAAMAK
YASGTTLSNYSTIAFQGIMNTYRLLNKMDEASLTPKALVEKIRTTSDEPSFLGWTYTCDPAKLAVAGQSGLCSTLEVIVE
VKNGVPTTISDPIDGSKLLRL
>Mature_421_residues
MMRRTRNLAVLLGLATALTAACGSAPKSDTGGGETGAADAAALGPVVAAPTGTPLVIGYISQENTAVGSYPEALASARAA
ADYINKHLGGVHGRPLELSSCVTDGSVATSANCARQIASTSGVVAASSSLDFGAQGAVPVLQAAGIPRIGGIAIFPEEAS
SPTVFNFAGGSFAAFPAIDTFVATVQKAGRVSALTSDTSPGIASANDQIKTPLQRDLGYKDVPIVVAAPDAADLTGALTQ
LNASKPDAVVSSFGQACVRIMQAKKALALPFTMYHTSKCLDERVLQSAGEAAEGHRFNSETRMWNEKDDDAAIYRAAMAK
YASGTTLSNYSTIAFQGIMNTYRLLNKMDEASLTPKALVEKIRTTSDEPSFLGWTYTCDPAKLAVAGQSGLCSTLEVIVE
VKNGVPTTISDPIDGSKLLRL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43400; Mature: 43400

Theoretical pI: Translated: 5.77; Mature: 5.77

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMRRTRNLAVLLGLATALTAACGSAPKSDTGGGETGAADAAALGPVVAAPTGTPLVIGYI
CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHCCEEECCCCCCEEEEEE
SQENTAVGSYPEALASARAAADYINKHLGGVHGRPLELSSCVTDGSVATSANCARQIAST
CCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHCCCCCCHHHHHHHHHHHHC
SGVVAASSSLDFGAQGAVPVLQAAGIPRIGGIAIFPEEASSPTVFNFAGGSFAAFPAIDT
CCEEEECCCCCCCCCCCCHHHHHCCCCCCCCEEEECCCCCCCEEEEECCCCEEHHHHHHH
FVATVQKAGRVSALTSDTSPGIASANDQIKTPLQRDLGYKDVPIVVAAPDAADLTGALTQ
HHHHHHHCCCEEEECCCCCCCCCCCCCHHCCCHHHCCCCCCCCEEEECCCHHHHHHHHHH
LNASKPDAVVSSFGQACVRIMQAKKALALPFTMYHTSKCLDERVLQSAGEAAEGHRFNSE
CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHCCCCCCCH
TRMWNEKDDDAAIYRAAMAKYASGTTLSNYSTIAFQGIMNTYRLLNKMDEASLTPKALVE
HHCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
KIRTTSDEPSFLGWTYTCDPAKLAVAGQSGLCSTLEVIVEVKNGVPTTISDPIDGSKLLR
HHHCCCCCCCEEEEEEECCCCEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHC
L
C
>Mature Secondary Structure
MMRRTRNLAVLLGLATALTAACGSAPKSDTGGGETGAADAAALGPVVAAPTGTPLVIGYI
CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHCCEEECCCCCCEEEEEE
SQENTAVGSYPEALASARAAADYINKHLGGVHGRPLELSSCVTDGSVATSANCARQIAST
CCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHCCCCCCHHHHHHHHHHHHC
SGVVAASSSLDFGAQGAVPVLQAAGIPRIGGIAIFPEEASSPTVFNFAGGSFAAFPAIDT
CCEEEECCCCCCCCCCCCHHHHHCCCCCCCCEEEECCCCCCCEEEEECCCCEEHHHHHHH
FVATVQKAGRVSALTSDTSPGIASANDQIKTPLQRDLGYKDVPIVVAAPDAADLTGALTQ
HHHHHHHCCCEEEECCCCCCCCCCCCCHHCCCHHHCCCCCCCCEEEECCCHHHHHHHHHH
LNASKPDAVVSSFGQACVRIMQAKKALALPFTMYHTSKCLDERVLQSAGEAAEGHRFNSE
CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHCCCCCCCH
TRMWNEKDDDAAIYRAAMAKYASGTTLSNYSTIAFQGIMNTYRLLNKMDEASLTPKALVE
HHCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
KIRTTSDEPSFLGWTYTCDPAKLAVAGQSGLCSTLEVIVEVKNGVPTTISDPIDGSKLLR
HHHCCCCCCCEEEEEEECCCCEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHC
L
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA