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The map label for this gene is degU [H]

Identifier: 158316114

GI number: 158316114

Start: 5175667

End: 5176344

Strand: Reverse

Name: degU [H]

Synonym: Franean1_4332

Alternate gene names: 158316114

Gene position: 5176344-5175667 (Counterclockwise)

Preceding gene: 158316115

Following gene: 158316113

Centisome position: 57.63

GC content: 73.89

Gene sequence:

>678_bases
GTGCCGGAGGAACCCGCCGACCCCGCGCGGCCGCTGCGGGTCGTGCTCGCCGAGGATCTCGCCCTGCTGCGGGACGGGCT
CATCCGGCTGCTCGAGGCGCACGGCTTCGAGATCGTCGCCGCGGTCGACAACGCCCCGCAGCTGGTGCGCGAGCTCGTCA
CGCTGCGTCCGGACGTCGCCGTCGTCGACGTCCGACTGCCGCCGAGCCACACCGACGAGGGCCTGCGCGCCGCGCTCGAG
GCGCGGGAGCGCATCCCCGGGCTGCCGGTGCTCGTGCTCTCGCAGTACGTCGAGCAGCTCTACGCCCGTGAGCTGCTCGC
CGACGGCCGGGGCGGCATCGGCTACCTCCTGAAGGACCGGGTCTCCGACGTGGGCCAGTTCGTCGACGCCGTCCGGCGGG
TCGCCGCCGGCGGGACGGCCCTCGACCCCACGGTGGTCGCCCGCCTGCTCGACAGCCGCCGCCGTCGCCTGCCGCTGGAC
CGCCTCAGCCCGCGCGAGCGTGAGGTCCTCTCGCACATGGCGCAGGGCCGGTCCAACGCGGCGATCGGTGCCGCGATGGT
GATCACCGAGAAGGCCGTCGGCAAGCACACCAACAGCATCTTCACCAAGCTGGGGCTGATGCCGTCCGAGGACGACAACC
GGCGGGTGCTCGCCGTCCTCGCCTACCTCGAGGGCTGA

Upstream 100 bases:

>100_bases
CCTGCCGTGCCCGGTCCTGCCGGGCGCGGAGGCCTGAGGGCCTGAGCGCCCAAAGGACCTGAGGACCTGAGGACCGAGCG
AAACTGAGGAGGTGCCGTCC

Downstream 100 bases:

>100_bases
CCCGCCGCCGGTGCCCGGGCGACCCGGCCGGGCGCCGACCGTGGCGACGGTGACGAACCGAGAGTGAACCATCGCTGAAC
CCATCCCGAGCACGATGGAA

Product: two component LuxR family transcriptional regulator

Products: NA

Alternate protein names: Protease production enhancer protein [H]

Number of amino acids: Translated: 225; Mature: 224

Protein sequence:

>225_residues
MPEEPADPARPLRVVLAEDLALLRDGLIRLLEAHGFEIVAAVDNAPQLVRELVTLRPDVAVVDVRLPPSHTDEGLRAALE
ARERIPGLPVLVLSQYVEQLYARELLADGRGGIGYLLKDRVSDVGQFVDAVRRVAAGGTALDPTVVARLLDSRRRRLPLD
RLSPREREVLSHMAQGRSNAAIGAAMVITEKAVGKHTNSIFTKLGLMPSEDDNRRVLAVLAYLEG

Sequences:

>Translated_225_residues
MPEEPADPARPLRVVLAEDLALLRDGLIRLLEAHGFEIVAAVDNAPQLVRELVTLRPDVAVVDVRLPPSHTDEGLRAALE
ARERIPGLPVLVLSQYVEQLYARELLADGRGGIGYLLKDRVSDVGQFVDAVRRVAAGGTALDPTVVARLLDSRRRRLPLD
RLSPREREVLSHMAQGRSNAAIGAAMVITEKAVGKHTNSIFTKLGLMPSEDDNRRVLAVLAYLEG
>Mature_224_residues
PEEPADPARPLRVVLAEDLALLRDGLIRLLEAHGFEIVAAVDNAPQLVRELVTLRPDVAVVDVRLPPSHTDEGLRAALEA
RERIPGLPVLVLSQYVEQLYARELLADGRGGIGYLLKDRVSDVGQFVDAVRRVAAGGTALDPTVVARLLDSRRRRLPLDR
LSPREREVLSHMAQGRSNAAIGAAMVITEKAVGKHTNSIFTKLGLMPSEDDNRRVLAVLAYLEG

Specific function: Regulating factor for the production of extracellular proteases. The N-terminal region acts as an inhibitor, whereas the C-terminal region carries enhancing activity [H]

COG id: COG2197

COG function: function code TK; Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR016032
- InterPro:   IPR001789
- InterPro:   IPR000792
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00196 GerE; PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 24565; Mature: 24434

Theoretical pI: Translated: 6.54; Mature: 6.54

Prosite motif: PS50110 RESPONSE_REGULATORY ; PS50043 HTH_LUXR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPEEPADPARPLRVVLAEDLALLRDGLIRLLEAHGFEIVAAVDNAPQLVRELVTLRPDVA
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHCCCCEE
VVDVRLPPSHTDEGLRAALEARERIPGLPVLVLSQYVEQLYARELLADGRGGIGYLLKDR
EEEEECCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
VSDVGQFVDAVRRVAAGGTALDPTVVARLLDSRRRRLPLDRLSPREREVLSHMAQGRSNA
HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCHHHCCCHHHHHHHHHHCCCCCC
AIGAAMVITEKAVGKHTNSIFTKLGLMPSEDDNRRVLAVLAYLEG
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCC
>Mature Secondary Structure 
PEEPADPARPLRVVLAEDLALLRDGLIRLLEAHGFEIVAAVDNAPQLVRELVTLRPDVA
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHCCCCEE
VVDVRLPPSHTDEGLRAALEARERIPGLPVLVLSQYVEQLYARELLADGRGGIGYLLKDR
EEEEECCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
VSDVGQFVDAVRRVAAGGTALDPTVVARLLDSRRRRLPLDRLSPREREVLSHMAQGRSNA
HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCHHHCCCHHHHHHHHHHCCCCCC
AIGAAMVITEKAVGKHTNSIFTKLGLMPSEDDNRRVLAVLAYLEG
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3136143; 3141378; 3141377; 9384377 [H]