| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158316046
Identifier: 158316046
GI number: 158316046
Start: 5090279
End: 5092189
Strand: Reverse
Name: 158316046
Synonym: Franean1_4264
Alternate gene names: NA
Gene position: 5092189-5090279 (Counterclockwise)
Preceding gene: 158316047
Following gene: 158316045
Centisome position: 56.69
GC content: 76.3
Gene sequence:
>1911_bases ATGAAGCTGCCAACCCTGCTCGACTACCAGCAGGCCGTCCAGATCCCGCGGCTGGCCTTCCTGGACGACCAGCTGCGGGA GAGCGTGCCGCGGCTGACCCCGCTGGGCATGCCGGCGGTCGCCACCGGCGGGTTCGCCCTGACCTTCGACGTAAGCCTGG GCGGCCGGCGCTACGCCGTGCGCTGCTTCCACCGGCACAGCGACAACCTGGAGCTGCGCTACGCCTGCATCGCCGAGTTC GTCCGCTCGGCCGCGCTGGACTTCCTGGTCGGCGTGGACTACCAGCCGGCCGGAATCCGGGTGCGCGGCCACTGCTGGCC GATCGTGCGGATGGAGTGGATCGACGGCGCGCGGCTCGACGACTGGGTCCAGGAGAACCTGGACCGGCCCGCGCACCTCG ACCGGGCCCGGCTCGGCCTGGGCTTCGCCGTCGCCGAGCTGCGCCGCCGCGGTGCCGCGCACGGCGACCTGCAGCACGGC AACATCCTCGTGCTGCCGGACAGGTCCGTACGGCTCGTCGACTACGACGGGATGTACCTGCCGGGGCTGAGCGGGCTCGG CGCCTCCGAGCGGGGCCACCGCAACTACCAGCATCCGGACCGCTCGAACCAGTACGACGTCACGCTCGACCGCTTCGCCG AAGAGGTGATCACGGTGTCGCTCGCCGCCCTCGCCCGGAATCCGGGCCTGTGGCGTGAGTTCAACACCGGCGAGAACCTG ATCTTCTCGGCCGCGGACTTCGCCGACCCGTCCGCCTCGGCCCTGTTCGCACGCCTCGAGCGGATGCCCGGGGTCGCGGC CGCCGCGCGCCGGCTGCGGGACGCCTGCCTGGTCGACTTCCAGGACGTGCCGGCGGTGCTCGACGCCGACGCGCTCGCCC CGTACCGGTCGGGCGCGGTGGGCGGGGCCGGCTGCGCCGGGGTGACCGGCCCGGCACTCACGGCCGGCCCGGCGCCCGCG GGCCGCGCGGCACCCGTGGACCGTTCAGCGCTTCCGGCCGGCCCGGTGCTCCCGGCGGCTCCGCCGCGACGGCAGCATCA GCCACATCAGCCACATCAGCCACATCCGGTGCGACCTGTGCAGCCGGCGCGGCCGGCTGGTCCGGTGCCGGTGGGCGGGC ACGAGGCGGTGACACGGCACCCGCGTCCGGGCGGCGCCGTGGGTGTGGTCAGCACGGTGAGCGCGGCGCGTTACCTGCGC ACCCGGCCGCTGCGGCCGGCCCCGGTGCCCGTCGGTGGGCCCGGGGTGCTCTCCGCCCTCGACCGGGCCGGTCTGCTCGC CCGCCGGGGGGAGGAGATCACCGTCGTCGGCCGGGTCGTCCGGGTCCGGCAGCTGGAACGCACCGGCATGATCACGGTCC TGGAGTTCGGGGACGACCGTGGCGGCGGCTTCAGTGTCGTCGGGTGGGACCGGGTCAGCCGGGAGCTCATCGCGACCCAC GGCGACCCTGCGCGGCTCGCGGGCACCTGGGTGCGGGTGATCGGGCAGTTGGCCGTGGACGACCGGGGGAGCTCGTTTCA CGGGCCCACCGCGACGTCGCCGGCGCGGCTCGTTCGGCCGACCGGGCCGAGCTGGTCCAGCCAGTCCAGCGGCTCGGGCG GCGACGGCCGCGACGGCCGGGGGAGCCGCGACGGCAGCGGGAGCCGGGACAACCGGCGGGGCCGATCCGACGCTGCCGCC GGGCGGCCGCCCGCGCCCCGGATCGAGCTGCGCCGGGGGAGCCTGCTGCGGGTGCTGACCGAGCGCCAGGCCGAGAGCCT GCTGAACCGGCCCGGGACGGTGCCCGCCGCGCCCGCGACCCGCTCGGCCTACGGATCGGGGCCGGTCCTGCCGCCCCGCC GGCCGCTCCCTCCGCCGCCGGTGCCGGGGCCGACGCTGACCCGTTCGCCGTCGTGGCGCGGGTGGAGCTGA
Upstream 100 bases:
>100_bases GAGCCGTCGCCGCCTACCGGCACCACGGGTACCTCGCCGACGACGACACGACGATCTGCGTGGTGCAAGCGTGAGCCTGC GCCGGCCCGAGGGCATGTGA
Downstream 100 bases:
>100_bases CGGCACCGCGGGCCCCCCGCGATCGTGGTGCCCCTGGCCCGGACGGGCGGTGTCCGTATAGCCCGGGACTAGTCCCTCCC CGGGACCCGAGAAACCCCTG
Product: OB-fold tRNA/helicase-type nucleic acid binding protein
Products: NA
Alternate protein names: Aminoglycoside Phosphotransferase; Mn2+-Dependent Serine/Threonine Protein Kinase
Number of amino acids: Translated: 636; Mature: 636
Protein sequence:
>636_residues MKLPTLLDYQQAVQIPRLAFLDDQLRESVPRLTPLGMPAVATGGFALTFDVSLGGRRYAVRCFHRHSDNLELRYACIAEF VRSAALDFLVGVDYQPAGIRVRGHCWPIVRMEWIDGARLDDWVQENLDRPAHLDRARLGLGFAVAELRRRGAAHGDLQHG NILVLPDRSVRLVDYDGMYLPGLSGLGASERGHRNYQHPDRSNQYDVTLDRFAEEVITVSLAALARNPGLWREFNTGENL IFSAADFADPSASALFARLERMPGVAAAARRLRDACLVDFQDVPAVLDADALAPYRSGAVGGAGCAGVTGPALTAGPAPA GRAAPVDRSALPAGPVLPAAPPRRQHQPHQPHQPHPVRPVQPARPAGPVPVGGHEAVTRHPRPGGAVGVVSTVSAARYLR TRPLRPAPVPVGGPGVLSALDRAGLLARRGEEITVVGRVVRVRQLERTGMITVLEFGDDRGGGFSVVGWDRVSRELIATH GDPARLAGTWVRVIGQLAVDDRGSSFHGPTATSPARLVRPTGPSWSSQSSGSGGDGRDGRGSRDGSGSRDNRRGRSDAAA GRPPAPRIELRRGSLLRVLTERQAESLLNRPGTVPAAPATRSAYGSGPVLPPRRPLPPPPVPGPTLTRSPSWRGWS
Sequences:
>Translated_636_residues MKLPTLLDYQQAVQIPRLAFLDDQLRESVPRLTPLGMPAVATGGFALTFDVSLGGRRYAVRCFHRHSDNLELRYACIAEF VRSAALDFLVGVDYQPAGIRVRGHCWPIVRMEWIDGARLDDWVQENLDRPAHLDRARLGLGFAVAELRRRGAAHGDLQHG NILVLPDRSVRLVDYDGMYLPGLSGLGASERGHRNYQHPDRSNQYDVTLDRFAEEVITVSLAALARNPGLWREFNTGENL IFSAADFADPSASALFARLERMPGVAAAARRLRDACLVDFQDVPAVLDADALAPYRSGAVGGAGCAGVTGPALTAGPAPA GRAAPVDRSALPAGPVLPAAPPRRQHQPHQPHQPHPVRPVQPARPAGPVPVGGHEAVTRHPRPGGAVGVVSTVSAARYLR TRPLRPAPVPVGGPGVLSALDRAGLLARRGEEITVVGRVVRVRQLERTGMITVLEFGDDRGGGFSVVGWDRVSRELIATH GDPARLAGTWVRVIGQLAVDDRGSSFHGPTATSPARLVRPTGPSWSSQSSGSGGDGRDGRGSRDGSGSRDNRRGRSDAAA GRPPAPRIELRRGSLLRVLTERQAESLLNRPGTVPAAPATRSAYGSGPVLPPRRPLPPPPVPGPTLTRSPSWRGWS >Mature_636_residues MKLPTLLDYQQAVQIPRLAFLDDQLRESVPRLTPLGMPAVATGGFALTFDVSLGGRRYAVRCFHRHSDNLELRYACIAEF VRSAALDFLVGVDYQPAGIRVRGHCWPIVRMEWIDGARLDDWVQENLDRPAHLDRARLGLGFAVAELRRRGAAHGDLQHG NILVLPDRSVRLVDYDGMYLPGLSGLGASERGHRNYQHPDRSNQYDVTLDRFAEEVITVSLAALARNPGLWREFNTGENL IFSAADFADPSASALFARLERMPGVAAAARRLRDACLVDFQDVPAVLDADALAPYRSGAVGGAGCAGVTGPALTAGPAPA GRAAPVDRSALPAGPVLPAAPPRRQHQPHQPHQPHPVRPVQPARPAGPVPVGGHEAVTRHPRPGGAVGVVSTVSAARYLR TRPLRPAPVPVGGPGVLSALDRAGLLARRGEEITVVGRVVRVRQLERTGMITVLEFGDDRGGGFSVVGWDRVSRELIATH GDPARLAGTWVRVIGQLAVDDRGSSFHGPTATSPARLVRPTGPSWSSQSSGSGGDGRDGRGSRDGSGSRDNRRGRSDAAA GRPPAPRIELRRGSLLRVLTERQAESLLNRPGTVPAAPATRSAYGSGPVLPPRRPLPPPPVPGPTLTRSPSWRGWS
Specific function: Unknown
COG id: COG0515
COG function: function code RTKL; Serine/threonine protein kinase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 68018; Mature: 68018
Theoretical pI: Translated: 11.13; Mature: 11.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLPTLLDYQQAVQIPRLAFLDDQLRESVPRLTPLGMPAVATGGFALTFDVSLGGRRYAV CCCCCCCCHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCEECCCEEEEEEECCCCCEEEE RCFHRHSDNLELRYACIAEFVRSAALDFLVGVDYQPAGIRVRGHCWPIVRMEWIDGARLD EEEECCCCCCEEHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCEEEEEEEECCCCCCHH DWVQENLDRPAHLDRARLGLGFAVAELRRRGAAHGDLQHGNILVLPDRSVRLVDYDGMYL HHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCEEEEECCCEEC PGLSGLGASERGHRNYQHPDRSNQYDVTLDRFAEEVITVSLAALARNPGLWREFNTGENL CCCCCCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCE IFSAADFADPSASALFARLERMPGVAAAARRLRDACLVDFQDVPAVLDADALAPYRSGAV EEEECCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHCCHHHHHHHCCCCCCCCC GGAGCAGVTGPALTAGPAPAGRAAPVDRSALPAGPVLPAAPPRRQHQPHQPHQPHPVRPV CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC QPARPAGPVPVGGHEAVTRHPRPGGAVGVVSTVSAARYLRTRPLRPAPVPVGGPGVLSAL CCCCCCCCCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHH DRAGLLARRGEEITVVGRVVRVRQLERTGMITVLEFGDDRGGGFSVVGWDRVSRELIATH HHHHHHHHCCCEEEEHHHHHHHHHHHHCCCEEEEEECCCCCCCEEEEEHHHHHHHHHHCC GDPARLAGTWVRVIGQLAVDDRGSSFHGPTATSPARLVRPTGPSWSSQSSGSGGDGRDGR CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCC GSRDGSGSRDNRRGRSDAAAGRPPAPRIELRRGSLLRVLTERQAESLLNRPGTVPAAPAT CCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCCC RSAYGSGPVLPPRRPLPPPPVPGPTLTRSPSWRGWS CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MKLPTLLDYQQAVQIPRLAFLDDQLRESVPRLTPLGMPAVATGGFALTFDVSLGGRRYAV CCCCCCCCHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCEECCCEEEEEEECCCCCEEEE RCFHRHSDNLELRYACIAEFVRSAALDFLVGVDYQPAGIRVRGHCWPIVRMEWIDGARLD EEEECCCCCCEEHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCEEEEEEEECCCCCCHH DWVQENLDRPAHLDRARLGLGFAVAELRRRGAAHGDLQHGNILVLPDRSVRLVDYDGMYL HHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCEEEEECCCEEC PGLSGLGASERGHRNYQHPDRSNQYDVTLDRFAEEVITVSLAALARNPGLWREFNTGENL CCCCCCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCE IFSAADFADPSASALFARLERMPGVAAAARRLRDACLVDFQDVPAVLDADALAPYRSGAV EEEECCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHCCHHHHHHHCCCCCCCCC GGAGCAGVTGPALTAGPAPAGRAAPVDRSALPAGPVLPAAPPRRQHQPHQPHQPHPVRPV CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC QPARPAGPVPVGGHEAVTRHPRPGGAVGVVSTVSAARYLRTRPLRPAPVPVGGPGVLSAL CCCCCCCCCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHH DRAGLLARRGEEITVVGRVVRVRQLERTGMITVLEFGDDRGGGFSVVGWDRVSRELIATH HHHHHHHHCCCEEEEHHHHHHHHHHHHCCCEEEEEECCCCCCCEEEEEHHHHHHHHHHCC GDPARLAGTWVRVIGQLAVDDRGSSFHGPTATSPARLVRPTGPSWSSQSSGSGGDGRDGR CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCC GSRDGSGSRDNRRGRSDAAAGRPPAPRIELRRGSLLRVLTERQAESLLNRPGTVPAAPAT CCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCCC RSAYGSGPVLPPRRPLPPPPVPGPTLTRSPSWRGWS CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA