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The map label for this gene is 158315973

Identifier: 158315973

GI number: 158315973

Start: 4985673

End: 4986881

Strand: Reverse

Name: 158315973

Synonym: Franean1_4191

Alternate gene names: NA

Gene position: 4986881-4985673 (Counterclockwise)

Preceding gene: 158315980

Following gene: 158315972

Centisome position: 55.52

GC content: 74.44

Gene sequence:

>1209_bases
ATGTCGCATGACCGTACGGGCGTGAGTCCGCCCGTGCTACTGACTGTCGGTCCGGCCACAGCCACGTCCCGGGCATCACT
GCCGGCCGTGCCGGTGGAGCCAGCCCCGCCAGCCGTCGCCGCCGTGCCGGTGGAGCCGTCCCGGCCGGTCGCGACGGCCG
TCGCGGTGCGGCCGCCCACGCCGGTGGGCCCGGCGGCGGCGTGCCCACCGCCGGTGAGCACCGCGGGCAGGCGGACCTTG
GCCAAGGCCGCCGTGGGCGCGGCCGCCGCGGGGGAGAGCGCCGCGTCGCCGCGGGCGGCGGGCGCCGCGCCCGAGCTGGA
TCCGCGGCCGAAGTCCCGCGCCGAGCAGATCCTGCTCGCGCTCTTCCTGGGTGGGCCGCTGCTGGCGGTCGCCCTCGCTG
TCCCGTTCGCCTGGGGCTGGGGTCTGAGCTGGCACGACGTCGTCATCGGCGCGGTGATGTACGTCATCGGCGGTCTTGGG
ATCACCGTCGGCTACCACCGGCACTTCACCCATGGCGCGTTCAAGGCGCGCCGGGGCCTGCGGATCGCGCTCGCTCTCGC
CGGCAGCATGGCGATCGAGATGAGCGTGATCGACTGGGTGGCCGCGCACCGGCGCCACCACCGCTTCTCCGACCGTGACG
GCGACCCGCACTCCCCGTGGCGTTTCGGGCCCGGTACCCGGTCGCTGGCGCGCGGTCTGCTGCACGCGCACGTCGGGTGG
CTGTTCGCGCCGCGGCGGACCAATGCCCAGCGGTACTGCCCGGACCTGCTCGCCGACCGGGACATCCGGCGGATCTCGGA
CCGCTTCGGCTGGCTCGTCGCCGTGTCGATGCTTCTCCCGCCGCTGGTCGGCGGCCTGTGGGCGGGGTCGTGGACGGGCG
CGCTCACCGCGTTCTTCTGGGCGTCGCTGGTCCGGGTCTTCCTGTTGCACCACGTGACCTTCTCGATCAACTCGATCTGC
CACGTCCTGGGCGCCACGCCGTTCGCCACCCGGGACCACTCGGGCAACGTGTGGTGGCTGGCCGTCCCGTCGTTCGGGGA
GGCGTGGCACAACCTGCACCACGCGGACCCCACCAGCGCGCGGCACGGTGTGCTGCGCGGCCAGATCGACCTCAGCGCCG
GGCTGATCGCGGTGTTCGAGCGTCTCGGCTGGGCCCATGACGTGCGCTGGCCCGACAGCGAGCGGATCGCGGCGAAGCGC
GCCGCCTGA

Upstream 100 bases:

>100_bases
GGTCAGACCCCCCTAGGCCGGGGCGCCACCTCCACTGACCAGGACGATGATTCGCAGCAGAGTCGGCGGTGTCGTCGTCG
GCCACCTGGAGAGGGTCCAT

Downstream 100 bases:

>100_bases
TCGCCGCCCGCCCGTTCTCCCCGCCGCGCGGTGCGCCGTGACGGAGTCGTCAGTGCACACCGCTCCGTAGGCCGGGCGGC
ACCGTACGCAGGGGTCGAGT

Product: stearoyl-CoA 9-desaturase

Products: NA

Alternate protein names: Fatty Acid Desaturase; Delta-9 Acyl-Phospholipid Desaturase; Fatty-Acid Desaturase; Delta-9 Desaturase; Acyl-CoA Desaturase; Fatty Acid Desaturase Subfamily; Delta 9 Acyl-Lipid Fatty Acid Desaturase; Fatty Acid Desaturase Family Proteiin; Stearoyl-CoA Desaturase; Fatty Acid Desaturase Domain Protein; Fatty Acid Desaturase Family Protein; Palmitoyl-Monogalactosyldiacylglycerol Delta-7 Desaturase; Delta-9 Acyl-Lipid Desaturase; Delta 9 Acyl-Lipid Desaturase; Stearoyl/Acyl-CoA Desaturase; Membrane-Bound Fatty Acid Desaturase; Long Chain Acyl-CoA Desaturase; Delta-9 Fatty Acid Desaturase; Fatty-Acid Desaturase Transmenbrane Protein; Delta-9 Fatty Ac Id Desaturase; Fatty Acid-CoA Desaturase; Acyl-Coa Desaturase; Delta-9-Acyl-Lipid Fatty Acid Desaturase; Syn-2 Delta 9 Acyl-Lipid Fatty Acid Desaturase; Eucaryotic Stearoyl-CoA 9-Desaturase; Fatty Acid Desaturase Protein; Fatty-Acid Desaturase-Like Protein

Number of amino acids: Translated: 402; Mature: 401

Protein sequence:

>402_residues
MSHDRTGVSPPVLLTVGPATATSRASLPAVPVEPAPPAVAAVPVEPSRPVATAVAVRPPTPVGPAAACPPPVSTAGRRTL
AKAAVGAAAAGESAASPRAAGAAPELDPRPKSRAEQILLALFLGGPLLAVALAVPFAWGWGLSWHDVVIGAVMYVIGGLG
ITVGYHRHFTHGAFKARRGLRIALALAGSMAIEMSVIDWVAAHRRHHRFSDRDGDPHSPWRFGPGTRSLARGLLHAHVGW
LFAPRRTNAQRYCPDLLADRDIRRISDRFGWLVAVSMLLPPLVGGLWAGSWTGALTAFFWASLVRVFLLHHVTFSINSIC
HVLGATPFATRDHSGNVWWLAVPSFGEAWHNLHHADPTSARHGVLRGQIDLSAGLIAVFERLGWAHDVRWPDSERIAAKR
AA

Sequences:

>Translated_402_residues
MSHDRTGVSPPVLLTVGPATATSRASLPAVPVEPAPPAVAAVPVEPSRPVATAVAVRPPTPVGPAAACPPPVSTAGRRTL
AKAAVGAAAAGESAASPRAAGAAPELDPRPKSRAEQILLALFLGGPLLAVALAVPFAWGWGLSWHDVVIGAVMYVIGGLG
ITVGYHRHFTHGAFKARRGLRIALALAGSMAIEMSVIDWVAAHRRHHRFSDRDGDPHSPWRFGPGTRSLARGLLHAHVGW
LFAPRRTNAQRYCPDLLADRDIRRISDRFGWLVAVSMLLPPLVGGLWAGSWTGALTAFFWASLVRVFLLHHVTFSINSIC
HVLGATPFATRDHSGNVWWLAVPSFGEAWHNLHHADPTSARHGVLRGQIDLSAGLIAVFERLGWAHDVRWPDSERIAAKR
AA
>Mature_401_residues
SHDRTGVSPPVLLTVGPATATSRASLPAVPVEPAPPAVAAVPVEPSRPVATAVAVRPPTPVGPAAACPPPVSTAGRRTLA
KAAVGAAAAGESAASPRAAGAAPELDPRPKSRAEQILLALFLGGPLLAVALAVPFAWGWGLSWHDVVIGAVMYVIGGLGI
TVGYHRHFTHGAFKARRGLRIALALAGSMAIEMSVIDWVAAHRRHHRFSDRDGDPHSPWRFGPGTRSLARGLLHAHVGWL
FAPRRTNAQRYCPDLLADRDIRRISDRFGWLVAVSMLLPPLVGGLWAGSWTGALTAFFWASLVRVFLLHHVTFSINSICH
VLGATPFATRDHSGNVWWLAVPSFGEAWHNLHHADPTSARHGVLRGQIDLSAGLIAVFERLGWAHDVRWPDSERIAAKRA
A

Specific function: Unknown

COG id: COG1398

COG function: function code I; Fatty-acid desaturase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI53759151, Length=285, Percent_Identity=28.4210526315789, Blast_Score=108, Evalue=1e-23,
Organism=Homo sapiens, GI148596961, Length=293, Percent_Identity=27.6450511945392, Blast_Score=102, Evalue=5e-22,
Organism=Homo sapiens, GI148596938, Length=152, Percent_Identity=31.5789473684211, Blast_Score=78, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI17540878, Length=253, Percent_Identity=29.6442687747036, Blast_Score=113, Evalue=2e-25,
Organism=Caenorhabditis elegans, GI17561776, Length=253, Percent_Identity=28.8537549407115, Blast_Score=108, Evalue=6e-24,
Organism=Caenorhabditis elegans, GI17561774, Length=244, Percent_Identity=31.9672131147541, Blast_Score=106, Evalue=2e-23,
Organism=Saccharomyces cerevisiae, GI6321383, Length=245, Percent_Identity=31.4285714285714, Blast_Score=129, Evalue=8e-31,
Organism=Drosophila melanogaster, GI24646303, Length=266, Percent_Identity=28.9473684210526, Blast_Score=124, Evalue=2e-28,
Organism=Drosophila melanogaster, GI24646299, Length=266, Percent_Identity=28.9473684210526, Blast_Score=124, Evalue=2e-28,
Organism=Drosophila melanogaster, GI24646305, Length=266, Percent_Identity=28.9473684210526, Blast_Score=124, Evalue=2e-28,
Organism=Drosophila melanogaster, GI24646301, Length=266, Percent_Identity=28.9473684210526, Blast_Score=124, Evalue=2e-28,
Organism=Drosophila melanogaster, GI24646297, Length=266, Percent_Identity=28.9473684210526, Blast_Score=124, Evalue=2e-28,
Organism=Drosophila melanogaster, GI21358571, Length=249, Percent_Identity=30.1204819277108, Blast_Score=118, Evalue=8e-27,
Organism=Drosophila melanogaster, GI24646500, Length=267, Percent_Identity=28.0898876404494, Blast_Score=117, Evalue=2e-26,
Organism=Drosophila melanogaster, GI24646295, Length=252, Percent_Identity=28.1746031746032, Blast_Score=111, Evalue=1e-24,
Organism=Drosophila melanogaster, GI21358573, Length=245, Percent_Identity=30.2040816326531, Blast_Score=97, Evalue=3e-20,
Organism=Drosophila melanogaster, GI24662393, Length=311, Percent_Identity=26.0450160771704, Blast_Score=89, Evalue=4e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42835; Mature: 42704

Theoretical pI: Translated: 11.57; Mature: 11.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSHDRTGVSPPVLLTVGPATATSRASLPAVPVEPAPPAVAAVPVEPSRPVATAVAVRPPT
CCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCEEEEEECCCC
PVGPAAACPPPVSTAGRRTLAKAAVGAAAAGESAASPRAAGAAPELDPRPKSRAEQILLA
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
LFLGGPLLAVALAVPFAWGWGLSWHDVVIGAVMYVIGGLGITVGYHRHFTHGAFKARRGL
HHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHEEEHHHHHHHHHHHHHCCC
RIALALAGSMAIEMSVIDWVAAHRRHHRFSDRDGDPHSPWRFGPGTRSLARGLLHAHVGW
EEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
LFAPRRTNAQRYCPDLLADRDIRRISDRFGWLVAVSMLLPPLVGGLWAGSWTGALTAFFW
EECCCCCCHHHHCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
ASLVRVFLLHHVTFSINSICHVLGATPFATRDHSGNVWWLAVPSFGEAWHNLHHADPTSA
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCHHHHHHHCCCCCCCHH
RHGVLRGQIDLSAGLIAVFERLGWAHDVRWPDSERIAAKRAA
HCCCEEEEEEHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCC
>Mature Secondary Structure 
SHDRTGVSPPVLLTVGPATATSRASLPAVPVEPAPPAVAAVPVEPSRPVATAVAVRPPT
CCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCEEEEEECCCC
PVGPAAACPPPVSTAGRRTLAKAAVGAAAAGESAASPRAAGAAPELDPRPKSRAEQILLA
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
LFLGGPLLAVALAVPFAWGWGLSWHDVVIGAVMYVIGGLGITVGYHRHFTHGAFKARRGL
HHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHEEEHHHHHHHHHHHHHCCC
RIALALAGSMAIEMSVIDWVAAHRRHHRFSDRDGDPHSPWRFGPGTRSLARGLLHAHVGW
EEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
LFAPRRTNAQRYCPDLLADRDIRRISDRFGWLVAVSMLLPPLVGGLWAGSWTGALTAFFW
EECCCCCCHHHHCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
ASLVRVFLLHHVTFSINSICHVLGATPFATRDHSGNVWWLAVPSFGEAWHNLHHADPTSA
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCHHHHHHHCCCCCCCHH
RHGVLRGQIDLSAGLIAVFERLGWAHDVRWPDSERIAAKRAA
HCCCEEEEEEHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA