| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158315972
Identifier: 158315972
GI number: 158315972
Start: 4985228
End: 4985470
Strand: Reverse
Name: 158315972
Synonym: Franean1_4190
Alternate gene names: NA
Gene position: 4985470-4985228 (Counterclockwise)
Preceding gene: 158315973
Following gene: 158315967
Centisome position: 55.5
GC content: 72.02
Gene sequence:
>243_bases GTGGATGAGCTCCCTCTGCTCGTCGGGTCTGGTGACATCGCCCGGGCGCTGGGCGTCACCCGGCAGGCTGTCGATCACCG GCTGCGCAGTGATCCGGCGGCACCCGCGGCTGCGGGGGTCGTGAACCGGACGTCCGCCTGGAACGGGACCCGGATCTGGT GGCGCGAGGATGTCGACCGGTGGCTGAACCTCGAGCCTGACCGGTGGCATCGGCTGCTCGCGTCTACCGCGCGGGGCGGG TGA
Upstream 100 bases:
>100_bases TCTCGTGTGTCGTCCGTTGGTCCTGTGATGGGGTGCTCTGCCCCACCTACCGGGGCGGCGGGGCATCCCGTTCGTCCTTT TTGCGGTTAGCGTCGGCGGG
Downstream 100 bases:
>100_bases CCGGCGGTGGGCTGATCGTTCGACTACCGGCTGGTGCACCCCCGACGCAAGATAGTCAACGCTGTTGACGACCGTTCGTG ACTAAATTCGATCTTGAAAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 80; Mature: 80
Protein sequence:
>80_residues MDELPLLVGSGDIARALGVTRQAVDHRLRSDPAAPAAAGVVNRTSAWNGTRIWWREDVDRWLNLEPDRWHRLLASTARGG
Sequences:
>Translated_80_residues MDELPLLVGSGDIARALGVTRQAVDHRLRSDPAAPAAAGVVNRTSAWNGTRIWWREDVDRWLNLEPDRWHRLLASTARGG >Mature_80_residues MDELPLLVGSGDIARALGVTRQAVDHRLRSDPAAPAAAGVVNRTSAWNGTRIWWREDVDRWLNLEPDRWHRLLASTARGG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8898; Mature: 8898
Theoretical pI: Translated: 10.04; Mature: 10.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDELPLLVGSGDIARALGVTRQAVDHRLRSDPAAPAAAGVVNRTSAWNGTRIWWREDVDR CCCCCEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCCCEEEECCCHHH WLNLEPDRWHRLLASTARGG HCCCCHHHHHHHHHHHCCCC >Mature Secondary Structure MDELPLLVGSGDIARALGVTRQAVDHRLRSDPAAPAAAGVVNRTSAWNGTRIWWREDVDR CCCCCEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCCCEEEECCCHHH WLNLEPDRWHRLLASTARGG HCCCCHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA