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The map label for this gene is nudB [C]

Identifier: 158315850

GI number: 158315850

Start: 4845957

End: 4846388

Strand: Reverse

Name: nudB [C]

Synonym: Franean1_4065

Alternate gene names: 158315850

Gene position: 4846388-4845957 (Counterclockwise)

Preceding gene: 158315851

Following gene: 158315846

Centisome position: 53.96

GC content: 65.05

Gene sequence:

>432_bases
GTGGCGATCAGATACAGCATCGAGTGTTGGATCACTGGCCCGGACGGTGACGTTCTCCTCCTACAGGTACCTGCCCAGCC
AGGCAAGCACGAGGCGTTCTGGCAGCCGATCACCGGCGGCATCGAAGCCGGGGAGACCCCCCTGCAAGCCGCTCTCCGAG
AGATCCGCGAAGAAACCGGTCTAGACCTCGACGAGACCCGCCTCACCGAGATCGCCACGGGCATCACGGTCGCCATCACC
CCGACGCTGACCATCGACAAGACCCTCTACGCCGCATCGACACCATCCACCGCAGTGACCATCAGTCCGGACGAGCACCA
GGACCACCAGTGGCTACCCGCCACCAAGGTCCCCGAGGCCCTGTACTGGGACAGCAACCGCGACGCCTGGAAGCTCATCA
GCCAGCACCACCGCGGCAGTGGGCACGCCTAA

Upstream 100 bases:

>100_bases
TCTCGGAACCCCGAGCTCAGGGGTGGCCCGGAACAGGACCCCGGCCGGCGCATCGGAGTGTCAGTGTGGCACAAGCCCCA
CGTTGTAAAAGCATCGCTCC

Downstream 100 bases:

>100_bases
CGCCACGCGCACCCGAGGCGCCGTAACGGTCAACCAAAGGCGAACACCGACCAGCAGATCTCGTTGCGCAACCGCTGATC
GTCCAGCACCAGTTCGCGAA

Product: NUDIX hydrolase

Products: dAMP; pyrophosphate [C]

Alternate protein names: NA

Number of amino acids: Translated: 143; Mature: 142

Protein sequence:

>143_residues
MAIRYSIECWITGPDGDVLLLQVPAQPGKHEAFWQPITGGIEAGETPLQAALREIREETGLDLDETRLTEIATGITVAIT
PTLTIDKTLYAASTPSTAVTISPDEHQDHQWLPATKVPEALYWDSNRDAWKLISQHHRGSGHA

Sequences:

>Translated_143_residues
MAIRYSIECWITGPDGDVLLLQVPAQPGKHEAFWQPITGGIEAGETPLQAALREIREETGLDLDETRLTEIATGITVAIT
PTLTIDKTLYAASTPSTAVTISPDEHQDHQWLPATKVPEALYWDSNRDAWKLISQHHRGSGHA
>Mature_142_residues
AIRYSIECWITGPDGDVLLLQVPAQPGKHEAFWQPITGGIEAGETPLQAALREIREETGLDLDETRLTEIATGITVAITP
TLTIDKTLYAASTPSTAVTISPDEHQDHQWLPATKVPEALYWDSNRDAWKLISQHHRGSGHA

Specific function: Hydrolysis Of Nucleoside Triphosphates With A Preference For Datp. [C]

COG id: COG0494

COG function: function code LR; NTP pyrophosphohydrolases including oxidative damage repair enzymes

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 3.6.1.- [C]

Molecular weight: Translated: 15720; Mature: 15589

Theoretical pI: Translated: 4.62; Mature: 4.62

Prosite motif: PS00893 NUDIX

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAIRYSIECWITGPDGDVLLLQVPAQPGKHEAFWQPITGGIEAGETPLQAALREIREETG
CEEEEEEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHC
LDLDETRLTEIATGITVAITPTLTIDKTLYAASTPSTAVTISPDEHQDHQWLPATKVPEA
CCCCHHHHHHHHCCEEEEEECCEEECCEEEECCCCCCEEEECCCCCCCCCCCCCCCCCCE
LYWDSNRDAWKLISQHHRGSGHA
EEECCCCHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
AIRYSIECWITGPDGDVLLLQVPAQPGKHEAFWQPITGGIEAGETPLQAALREIREETG
EEEEEEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHC
LDLDETRLTEIATGITVAITPTLTIDKTLYAASTPSTAVTISPDEHQDHQWLPATKVPEA
CCCCHHHHHHHHCCEEEEEECCEEECCEEEECCCCCCEEEECCCCCCCCCCCCCCCCCCE
LYWDSNRDAWKLISQHHRGSGHA
EEECCCCHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: deoxy-ATP; H2O [C]

Specific reaction: deoxy-ATP + H2O = dAMP + pyrophosphate [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA