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The map label for this gene is yhfI [H]

Identifier: 158315750

GI number: 158315750

Start: 4743902

End: 4744759

Strand: Reverse

Name: yhfI [H]

Synonym: Franean1_3962

Alternate gene names: 158315750

Gene position: 4744759-4743902 (Counterclockwise)

Preceding gene: 158315751

Following gene: 158315749

Centisome position: 52.82

GC content: 73.89

Gene sequence:

>858_bases
ATGGACGTGACCATGGAGTTGACTGTCCTCGGGTGCCGGTCGGGGATGCCCGCCGCCGGCCAGTGCAGCTCCAGCTACCT
GGTGGAGACCGAGGCGGCCCGCCTGCTGCTGGACTGCGGCCCCGGCGCCGCCACCGCGCTCAGCGCGGTCATGGATCCGC
GCCGGCTCGACGCCGTGGTCATCAGCCACCTGCACCTGGACCACTGCTACGACCTGCTGCCCGTCGGCAAGACCCTGCTG
GCCGGGCACGGCCGGTTCGCCGAGCTGTTCCCCACACTGCCCGAGCTGGCCACGCAGGTCCAGCGGGCCCCGGTGCCGCT
GTACGTGCCGCGCGGCGGCCGGGAGCGGCTGCGCGCGCTCGCCGCGCTGTTCCCCGTCACCACCATCCCGCTGCTCGACC
GTGCCTTCGAGGTGGCCTTCGACGTTCGCGAGTACGAGCCGGGCGACACCTTCGTCGTCGGCGACGCGACGGTCGGGGTG
CACGAGCTGCGCCACGCCGTGCCCAACTGCGGCACGCGGGTGGACTGCGCGTCCGGCAGCATCGCCTACACCGGCGACAC
CGGGGTGACCGAGGATCTCGTGCCCTTCGCCCGGGACGTCGACCTGCTGCTCGCCGAGGCGACGCTGGAGCTGACCGACA
CAACCGACCACGGCCATCTCAGCGCCACCGACGCGGCGCGGGCCGCCACCGAGGCCGAGGCGCGCCAGCTCGTCCTGACA
CATTTCGTGACCGCCGAGCCGACCTGGCTGCGGGCACGTCGGGAGGACGCCGAGCGGGTCTTCGACGGCCCGGTGCACAT
CGCCACGCCCGCGAGCCGCTTCACCGCCCGGGTCGCCGAGGCGGCCCCGCATGCCTGA

Upstream 100 bases:

>100_bases
CCGGTGGCCGTGCCGGCCGTGGCACGCGCCCATCAGGCGGCGGAGCGTGACCCGGCGGCGGCACACCGACGGTGCCGGCC
GCGCGGCCGGTCCGAACAGA

Downstream 100 bases:

>100_bases
CGGACCGTCCGGTCCGTCAGGCTCCGTGGATCAGGCAGGGACGGTGGATCAGGCGGGTGCCGTGGAGGAGCCGGTGCTGG
CTGTCTGGTGCGACTACGGC

Product: beta-lactamase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 285; Mature: 285

Protein sequence:

>285_residues
MDVTMELTVLGCRSGMPAAGQCSSSYLVETEAARLLLDCGPGAATALSAVMDPRRLDAVVISHLHLDHCYDLLPVGKTLL
AGHGRFAELFPTLPELATQVQRAPVPLYVPRGGRERLRALAALFPVTTIPLLDRAFEVAFDVREYEPGDTFVVGDATVGV
HELRHAVPNCGTRVDCASGSIAYTGDTGVTEDLVPFARDVDLLLAEATLELTDTTDHGHLSATDAARAATEAEARQLVLT
HFVTAEPTWLRARREDAERVFDGPVHIATPASRFTARVAEAAPHA

Sequences:

>Translated_285_residues
MDVTMELTVLGCRSGMPAAGQCSSSYLVETEAARLLLDCGPGAATALSAVMDPRRLDAVVISHLHLDHCYDLLPVGKTLL
AGHGRFAELFPTLPELATQVQRAPVPLYVPRGGRERLRALAALFPVTTIPLLDRAFEVAFDVREYEPGDTFVVGDATVGV
HELRHAVPNCGTRVDCASGSIAYTGDTGVTEDLVPFARDVDLLLAEATLELTDTTDHGHLSATDAARAATEAEARQLVLT
HFVTAEPTWLRARREDAERVFDGPVHIATPASRFTARVAEAAPHA
>Mature_285_residues
MDVTMELTVLGCRSGMPAAGQCSSSYLVETEAARLLLDCGPGAATALSAVMDPRRLDAVVISHLHLDHCYDLLPVGKTLL
AGHGRFAELFPTLPELATQVQRAPVPLYVPRGGRERLRALAALFPVTTIPLLDRAFEVAFDVREYEPGDTFVVGDATVGV
HELRHAVPNCGTRVDCASGSIAYTGDTGVTEDLVPFARDVDLLLAEATLELTDTTDHGHLSATDAARAATEAEARQLVLT
HFVTAEPTWLRARREDAERVFDGPVHIATPASRFTARVAEAAPHA

Specific function: Zinc Phosphodiesterase, Which Displays Some Trna 3'- Processing Endonuclease Activity. Probably Involved In Trna Maturation, By Removing A 3'Trailer From Precursor Trna. [C]

COG id: COG1234

COG function: function code R; Metal-dependent hydrolases of the beta-lactamase superfamily III

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001279 [H]

Pfam domain/function: PF00753 Lactamase_B [H]

EC number: 3.1.26.11 [C]

Molecular weight: Translated: 30540; Mature: 30540

Theoretical pI: Translated: 4.92; Mature: 4.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDVTMELTVLGCRSGMPAAGQCSSSYLVETEAARLLLDCGPGAATALSAVMDPRRLDAVV
CCEEEEEEEEECCCCCCCCCCCCCCEEEEHHHHEEEEECCCCHHHHHHHHCCCHHHHHHH
ISHLHLDHCYDLLPVGKTLLAGHGRFAELFPTLPELATQVQRAPVPLYVPRGGRERLRAL
HHHHHHHHHHHHHHHCHHHHHCCCCHHHHHCCHHHHHHHHHHCCCCEEECCCCHHHHHHH
AALFPVTTIPLLDRAFEVAFDVREYEPGDTFVVGDATVGVHELRHAVPNCGTRVDCASGS
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHCCCCCCEEECCCCC
IAYTGDTGVTEDLVPFARDVDLLLAEATLELTDTTDHGHLSATDAARAATEAEARQLVLT
EEECCCCCCCHHHHHHHHHHHHHEEHHEEEEECCCCCCCEECHHHHHHHHHHHHHHHHHH
HFVTAEPTWLRARREDAERVFDGPVHIATPASRFTARVAEAAPHA
HHHCCCCHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHCCCCC
>Mature Secondary Structure
MDVTMELTVLGCRSGMPAAGQCSSSYLVETEAARLLLDCGPGAATALSAVMDPRRLDAVV
CCEEEEEEEEECCCCCCCCCCCCCCEEEEHHHHEEEEECCCCHHHHHHHHCCCHHHHHHH
ISHLHLDHCYDLLPVGKTLLAGHGRFAELFPTLPELATQVQRAPVPLYVPRGGRERLRAL
HHHHHHHHHHHHHHHCHHHHHCCCCHHHHHCCHHHHHHHHHHCCCCEEECCCCHHHHHHH
AALFPVTTIPLLDRAFEVAFDVREYEPGDTFVVGDATVGVHELRHAVPNCGTRVDCASGS
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHCCCCCCEEECCCCC
IAYTGDTGVTEDLVPFARDVDLLLAEATLELTDTTDHGHLSATDAARAATEAEARQLVLT
EEECCCCCCCHHHHHHHHHHHHHEEHHEEEEECCCCCCCEECHHHHHHHHHHHHHHHHHH
HFVTAEPTWLRARREDAERVFDGPVHIATPASRFTARVAEAAPHA
HHHCCCCHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9579061; 9384377 [H]