| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158315749
Identifier: 158315749
GI number: 158315749
Start: 4743178
End: 4743909
Strand: Reverse
Name: 158315749
Synonym: Franean1_3961
Alternate gene names: NA
Gene position: 4743909-4743178 (Counterclockwise)
Preceding gene: 158315750
Following gene: 158315748
Centisome position: 52.82
GC content: 72.54
Gene sequence:
>732_bases ATGCCTGACGGACCGTCCGGTCCGTCAGGCTCCGTGGATCAGGCAGGGACGGTGGATCAGGCGGGTGCCGTGGAGGAGCC GGTGCTGGCTGTCTGGTGCGACTACGGCGGCGTGCTCAGCTCCTCCATCGCCGGCTCACCCGCCCAGGTGGCGACCGCGG CGGGAGTGCCGACGTCCGAGCTCATGGCCGCGATCCGGCGGGTCGCGACGTCCTTCGGGGCGACGATGATCGAACCGCTG GAACTCGGGGTCCTCTCCCAGCACGAGTGGGGCCTGCGGGTCACCGCGGAGCTGGCGCCGGCCTGGACGCCGCGGATCGA CCTGACCCGCTTCGGCGACCACTGGTACGCGGGCCGGACGGTCAACACGACCCTGTTCGAGCTGCTCGACCGGGTGCGGG CGAGCGGCGTGCGGGTCGGCATGCTCACCAACAGCGTGCGGGAGTGGGAACCGCACCGGCGAGCGCTGGCGCCGGCCGTC GACCCGTTCGAGGTCACCGTCAACTCCTTCGAGGTGGGCCTGCGCAAGCCGGATCCGGCGATCTTCGAGCTCGCCGAGTC GCGGTTCGGGACGCCGCCGCGGGCCTGCCTGCTCATCGACGACCTGGCGGTCAACTGCGCCGCGGCCCGGGCCCGGGGCT GGCGGGCGATCGAGCACACCGAGCTCGAGGACACTCTGGCACAGCTGCGCGCCGCTATTCCTGCCGTGGCCGCGGACGCG GTGACGGACTAA
Upstream 100 bases:
>100_bases CGGGCACGTCGGGAGGACGCCGAGCGGGTCTTCGACGGCCCGGTGCACATCGCCACGCCCGCGAGCCGCTTCACCGCCCG GGTCGCCGAGGCGGCCCCGC
Downstream 100 bases:
>100_bases CGCTCACACGCGTTTTGCCGTTACCCCGCACCAACGATAAATAATTGCGATCGGCCGATCCTTCGCACCCATAGCCCGGC GATAGGAGACGTTTACGGAT
Product: HAD family hydrolase
Products: NA
Alternate protein names: Hydrolase; HAD Family Hydrolase; Epoxide Hydrolase Domain-Containing Phosphatase
Number of amino acids: Translated: 243; Mature: 242
Protein sequence:
>243_residues MPDGPSGPSGSVDQAGTVDQAGAVEEPVLAVWCDYGGVLSSSIAGSPAQVATAAGVPTSELMAAIRRVATSFGATMIEPL ELGVLSQHEWGLRVTAELAPAWTPRIDLTRFGDHWYAGRTVNTTLFELLDRVRASGVRVGMLTNSVREWEPHRRALAPAV DPFEVTVNSFEVGLRKPDPAIFELAESRFGTPPRACLLIDDLAVNCAAARARGWRAIEHTELEDTLAQLRAAIPAVAADA VTD
Sequences:
>Translated_243_residues MPDGPSGPSGSVDQAGTVDQAGAVEEPVLAVWCDYGGVLSSSIAGSPAQVATAAGVPTSELMAAIRRVATSFGATMIEPL ELGVLSQHEWGLRVTAELAPAWTPRIDLTRFGDHWYAGRTVNTTLFELLDRVRASGVRVGMLTNSVREWEPHRRALAPAV DPFEVTVNSFEVGLRKPDPAIFELAESRFGTPPRACLLIDDLAVNCAAARARGWRAIEHTELEDTLAQLRAAIPAVAADA VTD >Mature_242_residues PDGPSGPSGSVDQAGTVDQAGAVEEPVLAVWCDYGGVLSSSIAGSPAQVATAAGVPTSELMAAIRRVATSFGATMIEPLE LGVLSQHEWGLRVTAELAPAWTPRIDLTRFGDHWYAGRTVNTTLFELLDRVRASGVRVGMLTNSVREWEPHRRALAPAVD PFEVTVNSFEVGLRKPDPAIFELAESRFGTPPRACLLIDDLAVNCAAARARGWRAIEHTELEDTLAQLRAAIPAVAADAV TD
Specific function: Unknown
COG id: COG1011
COG function: function code R; Predicted hydrolase (HAD superfamily)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25851; Mature: 25720
Theoretical pI: Translated: 4.56; Mature: 4.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPDGPSGPSGSVDQAGTVDQAGAVEEPVLAVWCDYGGVLSSSIAGSPAQVATAAGVPTSE CCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHCCCCCHHHHHHCCCCHHH LMAAIRRVATSFGATMIEPLELGVLSQHEWGLRVTAELAPAWTPRIDLTRFGDHWYAGRT HHHHHHHHHHHHCCHHHHHHHHCEECCCCCCEEEEEECCCCCCCCCEEEECCCCEECCCC VNTTLFELLDRVRASGVRVGMLTNSVREWEPHRRALAPAVDPFEVTVNSFEVGLRKPDPA HHHHHHHHHHHHHHCCEEEEHHHHHHHHCCHHHHHHCCCCCCCEEEECCEEECCCCCCHH IFELAESRFGTPPRACLLIDDLAVNCAAARARGWRAIEHTELEDTLAQLRAAIPAVAADA HHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHCCCCCHHHCCHHHHHHHHHHHHHHHHHHH VTD CCC >Mature Secondary Structure PDGPSGPSGSVDQAGTVDQAGAVEEPVLAVWCDYGGVLSSSIAGSPAQVATAAGVPTSE CCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHCCCCCHHHHHHCCCCHHH LMAAIRRVATSFGATMIEPLELGVLSQHEWGLRVTAELAPAWTPRIDLTRFGDHWYAGRT HHHHHHHHHHHHCCHHHHHHHHCEECCCCCCEEEEEECCCCCCCCCEEEECCCCEECCCC VNTTLFELLDRVRASGVRVGMLTNSVREWEPHRRALAPAVDPFEVTVNSFEVGLRKPDPA HHHHHHHHHHHHHHCCEEEEHHHHHHHHCCHHHHHHCCCCCCCEEEECCEEECCCCCCHH IFELAESRFGTPPRACLLIDDLAVNCAAARARGWRAIEHTELEDTLAQLRAAIPAVAADA HHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHCCCCCHHHCCHHHHHHHHHHHHHHHHHHH VTD CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA