| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is inaK [H]
Identifier: 158315735
GI number: 158315735
Start: 4717271
End: 4718128
Strand: Reverse
Name: inaK [H]
Synonym: Franean1_3947
Alternate gene names: 158315735
Gene position: 4718128-4717271 (Counterclockwise)
Preceding gene: 158315736
Following gene: 158315726
Centisome position: 52.53
GC content: 73.89
Gene sequence:
>858_bases ATGATTACCCGGAAAAGAAATTTCCGCACGTTGATACTCTCATCTCTTGTCGCCTTCGCGAGTGTTCCACTCATGGCTGG GATCGCTCAGGCACAGCCGGCGACCCTTCCGACGGACATCCCGCCGCCCGGGGCCGGGGACTTCCCGCCGCCCGGGCGGG GAGACTTCCCGCCGCCCGGCCCGGGAGACTTCCCGCCGCCTGGCCGGGGAGACTTCCGGCCGGCCGGGTACGGGGACTAC CCGCCGCCCGGCCCGGGAGACTACCGGCCGGCCGGGTACGGGGACTACCCGCCGCCCGGCCCGGTGGACTACCTGCCGAT CGGGTACGGGGACTACCCGCCGGACGGCCCGGTGGACTACCTGCCGATCGGGTACGGGGACTACCCGCCGGACGGCCCGG CGGACTACCTGCCGATCGGGTACGGGGACTACCCGCCGGACGGCCCGGGAGACTTCCTGCCGATCGGGCCCGAAGACTAC CCGCCGGTCGGGGTCGGGGACTACCCACCGGCCGGGTACGGGGACTACCCGCCGGACGGCCCGGGAGACTTCCTGCCGAT CGGGCCCGAAGACTACCCGCCGGTCGGGGTCGGGGACTACCCACCGGCCGGGTATGGGGACTACCCGCCGGACGGCCCGG CGGACTTCCTGCCGATCGGGTACGGGGACTACCCGCCGGACGGCCCGGCGGACTACCTGCCGATCGGGTACGGGGACTAC CCGCCGGACGGCCCGGGAGACTTCCTGCCGATCGGGTACGGGGACTACCCGCCGGACGGCCCGGCGGACTTCCCGCCGGC CGGGTACGGGGACTACCCGCCGCCCGGCCCGACAGGCTCGGCATCGGCCGGGGTCTGA
Upstream 100 bases:
>100_bases TGGACCTGCACGATAAATCCTGGGTCTTGACGGCCGTAACGTGTTGCCGTGGCACGGCAAGAAAGATTCAGACAATCCCC GCAAGCCATAAGGAAAGATA
Downstream 100 bases:
>100_bases CCCCGCCGCCGTTGACCACGAGATGACATAAGAACACGCAGGCCGGAGGTCCCAGCGTGCTGGAAACCTCCGGCCTGCTT GCTTGGCGCGCCTACCGATA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 285; Mature: 285
Protein sequence:
>285_residues MITRKRNFRTLILSSLVAFASVPLMAGIAQAQPATLPTDIPPPGAGDFPPPGRGDFPPPGPGDFPPPGRGDFRPAGYGDY PPPGPGDYRPAGYGDYPPPGPVDYLPIGYGDYPPDGPVDYLPIGYGDYPPDGPADYLPIGYGDYPPDGPGDFLPIGPEDY PPVGVGDYPPAGYGDYPPDGPGDFLPIGPEDYPPVGVGDYPPAGYGDYPPDGPADFLPIGYGDYPPDGPADYLPIGYGDY PPDGPGDFLPIGYGDYPPDGPADFPPAGYGDYPPPGPTGSASAGV
Sequences:
>Translated_285_residues MITRKRNFRTLILSSLVAFASVPLMAGIAQAQPATLPTDIPPPGAGDFPPPGRGDFPPPGPGDFPPPGRGDFRPAGYGDY PPPGPGDYRPAGYGDYPPPGPVDYLPIGYGDYPPDGPVDYLPIGYGDYPPDGPADYLPIGYGDYPPDGPGDFLPIGPEDY PPVGVGDYPPAGYGDYPPDGPGDFLPIGPEDYPPVGVGDYPPAGYGDYPPDGPADFLPIGYGDYPPDGPADYLPIGYGDY PPDGPGDFLPIGYGDYPPDGPADFPPAGYGDYPPPGPTGSASAGV >Mature_285_residues MITRKRNFRTLILSSLVAFASVPLMAGIAQAQPATLPTDIPPPGAGDFPPPGRGDFPPPGPGDFPPPGRGDFRPAGYGDY PPPGPGDYRPAGYGDYPPPGPVDYLPIGYGDYPPDGPVDYLPIGYGDYPPDGPADYLPIGYGDYPPDGPGDFLPIGPEDY PPVGVGDYPPAGYGDYPPDGPGDFLPIGPEDYPPVGVGDYPPAGYGDYPPDGPADFLPIGYGDYPPDGPADYLPIGYGDY PPDGPGDFLPIGYGDYPPDGPADFPPAGYGDYPPPGPTGSASAGV
Specific function: Ice nucleation proteins enable bacteria to nucleate crystallization in supercooled water [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell outer membrane; Peripheral membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial ice nucleation protein family [H]
Homologues:
Organism=Homo sapiens, GI169213065, Length=222, Percent_Identity=34.2342342342342, Blast_Score=70, Evalue=3e-12, Organism=Homo sapiens, GI169213233, Length=201, Percent_Identity=35.3233830845771, Blast_Score=67, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000258 [H]
Pfam domain/function: PF00818 Ice_nucleation [H]
EC number: NA
Molecular weight: Translated: 29390; Mature: 29390
Theoretical pI: Translated: 3.35; Mature: 3.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 0.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MITRKRNFRTLILSSLVAFASVPLMAGIAQAQPATLPTDIPPPGAGDFPPPGRGDFPPPG CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PGDFPPPGRGDFRPAGYGDYPPPGPGDYRPAGYGDYPPPGPVDYLPIGYGDYPPDGPVDY CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCE LPIGYGDYPPDGPADYLPIGYGDYPPDGPGDFLPIGPEDYPPVGVGDYPPAGYGDYPPDG EECCCCCCCCCCCCCEEECCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCC PGDFLPIGPEDYPPVGVGDYPPAGYGDYPPDGPADFLPIGYGDYPPDGPADYLPIGYGDY CCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCEEECCCCCC PPDGPGDFLPIGYGDYPPDGPADFPPAGYGDYPPPGPTGSASAGV CCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MITRKRNFRTLILSSLVAFASVPLMAGIAQAQPATLPTDIPPPGAGDFPPPGRGDFPPPG CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PGDFPPPGRGDFRPAGYGDYPPPGPGDYRPAGYGDYPPPGPVDYLPIGYGDYPPDGPVDY CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCE LPIGYGDYPPDGPADYLPIGYGDYPPDGPGDFLPIGPEDYPPVGVGDYPPAGYGDYPPDG EECCCCCCCCCCCCCEEECCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCC PGDFLPIGPEDYPPVGVGDYPPAGYGDYPPDGPADFLPIGYGDYPPDGPADYLPIGYGDY CCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCEEECCCCCC PPDGPGDFLPIGYGDYPPDGPADFPPAGYGDYPPPGPTGSASAGV CCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA