| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is pksS [H]
Identifier: 158315726
GI number: 158315726
Start: 4706526
End: 4707779
Strand: Reverse
Name: pksS [H]
Synonym: Franean1_3938
Alternate gene names: 158315726
Gene position: 4707779-4706526 (Counterclockwise)
Preceding gene: 158315735
Following gene: 158315725
Centisome position: 52.41
GC content: 74.4
Gene sequence:
>1254_bases ATGGTCGCCGCCGAGGTCACCGCAGGGGTCGCCGCCGAGTCCGCCCCGGTGGAGTTCACCGCGTTCCATCCGACCCACAA GGCCGATCCGTACGCCGTCTACCAGCGGGTGCGGGAGGCCCGGCCGCTGTGCCCGTTCATGCTCGGCGACATCCCGGTGA CGGTGCTCACCCGGTACGCCGACTGCGAGGCGGTGCTGCAGAGCGACGACTGGGTGCACGGCTACGACGCCGGCATCAGC CCGTTCCGGGACGGCGCCGCGAGCGCCCCGCGGTCGTTCCTGCGGATGGACCCGCCGGACCACACCCGGCTGCGCGGGCT GGTCAACAAGGCGTTCACCCCGCGGATCGTCAACCAGATGGCGCCGGGCATCCAGGCCCTCGCCGACCGGCTGGTGGACG GCGCGCTGGCCACCGGGAGCATCGACGTCATCGGCGAGTACGCGGCCCTGATCGCGAGCGCGACGCTCGGCCACCTGCTG GGCGTCCCGGACGACGTCGGCGCGTCGCTGCGCGGCTGGGCGCTGGCCATCGCCCGCGGCACCGACCCCGACAACCTGCT CACCGAGGCCGAGCTCGTCGCACGCCGGCAGGCCACCCAGGATTTCCAGGCCTACTTCGAGGAGCTGATCGCGCAGCGCC GGGCGAACCCCACCGACGACCTGATCAGCCGGATGGCCGCGGCCCGCGACCGCGACGACGCGCTCAGCGAGCTCGAGCTG CTCGGCGTCTCGTCGCTGCTCGTCGTGGCGGGGATGGAGACGTCCATCAACTATGTCGGGTCGGCGGTGCTCTCGCTGCT GCGCCACCCCGACCAGCTGGCGCTGCTGCGCGCCCGGCCGGAGCTGCTCCCCTCCGCGGTGGAGGAGGTGCTGCGCTACG ACCCGCCGACGCAGTTCACCATGCGCACCGCGTGCCGCCGGACCGAGCTGGCCGGGCACACGTTCGCCCGCGGCGACGGC GTCCTGCTGGTCAGCGCCGCCGCCGGCCGGGACCCGGCGGCGTTCACCGACCCCGACCGGTTCGACATCACCCGCTACCA CGGGCCGCGCCCGGCCCGCCGGCACCTGGGCTTCAGCGTCGGCATCCACTTCTGCCTGGGCGCCCCGCTCGCCCGGATCG AGGCGGCGGCGGCCATCGGGGCCCTCGTCCGGCGCACAACCACCCTGGAGCTCGCCGTCGACGAGGCCGAGCTGGTCTAC CTGCCCAGCCTCATCCACCGCGCGCTGGCCACCCTCCCGGTGCGGGTGCGCTGA
Upstream 100 bases:
>100_bases TCCGGCGCCGCCGTCCTGCATCGTGCGTGCCGCGGAGTGAGTGCACCCGTGCGCGCGGGCGCGGCCGCACGCACCGCGCT GACGCAGGAGTGGGAGAGCC
Downstream 100 bases:
>100_bases GCGAAGCCGGCGGGGATGCTGAGGGGGCGGGCGAGCCTAGCCGAGCGGCCAGGAAATTCGTGGCAGTACGTACTCGGACG GGTCGTTTGTCTCGCGCCCG
Product: cytochrome P450
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 417; Mature: 417
Protein sequence:
>417_residues MVAAEVTAGVAAESAPVEFTAFHPTHKADPYAVYQRVREARPLCPFMLGDIPVTVLTRYADCEAVLQSDDWVHGYDAGIS PFRDGAASAPRSFLRMDPPDHTRLRGLVNKAFTPRIVNQMAPGIQALADRLVDGALATGSIDVIGEYAALIASATLGHLL GVPDDVGASLRGWALAIARGTDPDNLLTEAELVARRQATQDFQAYFEELIAQRRANPTDDLISRMAAARDRDDALSELEL LGVSSLLVVAGMETSINYVGSAVLSLLRHPDQLALLRARPELLPSAVEEVLRYDPPTQFTMRTACRRTELAGHTFARGDG VLLVSAAAGRDPAAFTDPDRFDITRYHGPRPARRHLGFSVGIHFCLGAPLARIEAAAAIGALVRRTTTLELAVDEAELVY LPSLIHRALATLPVRVR
Sequences:
>Translated_417_residues MVAAEVTAGVAAESAPVEFTAFHPTHKADPYAVYQRVREARPLCPFMLGDIPVTVLTRYADCEAVLQSDDWVHGYDAGIS PFRDGAASAPRSFLRMDPPDHTRLRGLVNKAFTPRIVNQMAPGIQALADRLVDGALATGSIDVIGEYAALIASATLGHLL GVPDDVGASLRGWALAIARGTDPDNLLTEAELVARRQATQDFQAYFEELIAQRRANPTDDLISRMAAARDRDDALSELEL LGVSSLLVVAGMETSINYVGSAVLSLLRHPDQLALLRARPELLPSAVEEVLRYDPPTQFTMRTACRRTELAGHTFARGDG VLLVSAAAGRDPAAFTDPDRFDITRYHGPRPARRHLGFSVGIHFCLGAPLARIEAAAAIGALVRRTTTLELAVDEAELVY LPSLIHRALATLPVRVR >Mature_417_residues MVAAEVTAGVAAESAPVEFTAFHPTHKADPYAVYQRVREARPLCPFMLGDIPVTVLTRYADCEAVLQSDDWVHGYDAGIS PFRDGAASAPRSFLRMDPPDHTRLRGLVNKAFTPRIVNQMAPGIQALADRLVDGALATGSIDVIGEYAALIASATLGHLL GVPDDVGASLRGWALAIARGTDPDNLLTEAELVARRQATQDFQAYFEELIAQRRANPTDDLISRMAAARDRDDALSELEL LGVSSLLVVAGMETSINYVGSAVLSLLRHPDQLALLRARPELLPSAVEEVLRYDPPTQFTMRTACRRTELAGHTFARGDG VLLVSAAAGRDPAAFTDPDRFDITRYHGPRPARRHLGFSVGIHFCLGAPLARIEAAAAIGALVRRTTTLELAVDEAELVY LPSLIHRALATLPVRVR
Specific function: Involved in the metabolism of the antibiotic polyketide bacillaene which is involved in secondary metabolism. The substrate is dihydrobacillaene [H]
COG id: COG2124
COG function: function code Q; Cytochrome P450
Gene ontology:
Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the cytochrome P450 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001128 - InterPro: IPR002397 - InterPro: IPR017972 [H]
Pfam domain/function: PF00067 p450 [H]
EC number: NA
Molecular weight: Translated: 45048; Mature: 45048
Theoretical pI: Translated: 5.97; Mature: 5.97
Prosite motif: PS00086 CYTOCHROME_P450
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVAAEVTAGVAAESAPVEFTAFHPTHKADPYAVYQRVREARPLCPFMLGDIPVTVLTRYA CCCCHHHHCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHCCCCCCHHHCCCCHHHHHHHH DCEAVLQSDDWVHGYDAGISPFRDGAASAPRSFLRMDPPDHTRLRGLVNKAFTPRIVNQM HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCHHHHHHHHHHHCCHHHHHHH APGIQALADRLVDGALATGSIDVIGEYAALIASATLGHLLGVPDDVGASLRGWALAIARG CCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECC TDPDNLLTEAELVARRQATQDFQAYFEELIAQRRANPTDDLISRMAAARDRDDALSELEL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHH LGVSSLLVVAGMETSINYVGSAVLSLLRHPDQLALLRARPELLPSAVEEVLRYDPPTQFT HHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHCHHHHHHHHHHHHHCCCCCHHH MRTACRRTELAGHTFARGDGVLLVSAAAGRDPAAFTDPDRFDITRYHGPRPARRHLGFSV HHHHHHHHHHCCCCEECCCCEEEEEECCCCCCCCCCCCCCCCEECCCCCCHHHHHCCHHH GIHFCLGAPLARIEAAAAIGALVRRTTTLELAVDEAELVYLPSLIHRALATLPVRVR HHHHHHCCCHHHHHHHHHHHHHHHHHHEEEEEECCHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MVAAEVTAGVAAESAPVEFTAFHPTHKADPYAVYQRVREARPLCPFMLGDIPVTVLTRYA CCCCHHHHCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHCCCCCCHHHCCCCHHHHHHHH DCEAVLQSDDWVHGYDAGISPFRDGAASAPRSFLRMDPPDHTRLRGLVNKAFTPRIVNQM HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCHHHHHHHHHHHCCHHHHHHH APGIQALADRLVDGALATGSIDVIGEYAALIASATLGHLLGVPDDVGASLRGWALAIARG CCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECC TDPDNLLTEAELVARRQATQDFQAYFEELIAQRRANPTDDLISRMAAARDRDDALSELEL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHH LGVSSLLVVAGMETSINYVGSAVLSLLRHPDQLALLRARPELLPSAVEEVLRYDPPTQFT HHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHCHHHHHHHHHHHHHCCCCCHHH MRTACRRTELAGHTFARGDGVLLVSAAAGRDPAAFTDPDRFDITRYHGPRPARRHLGFSV HHHHHHHHHHCCCCEECCCCEEEEEECCCCCCCCCCCCCCCCEECCCCCCHHHHHCCHHH GIHFCLGAPLARIEAAAAIGALVRRTTTLELAVDEAELVYLPSLIHRALATLPVRVR HHHHHHCCCHHHHHHHHHHHHHHHHHHEEEEEECCHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]