| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is cyp144 [H]
Identifier: 158315725
GI number: 158315725
Start: 4705083
End: 4706375
Strand: Reverse
Name: cyp144 [H]
Synonym: Franean1_3937
Alternate gene names: 158315725
Gene position: 4706375-4705083 (Counterclockwise)
Preceding gene: 158315726
Following gene: 158315724
Centisome position: 52.4
GC content: 70.22
Gene sequence:
>1293_bases GTGAGTGAGCTCGAGACCAAGGACTTCTTCCGGGACGAGGAGCTCGTCGCGGACCCGTACCCGTTCCTCGAGGCGATGCG CGGGAAGTGCCCCGTGCAGCGCGAGAATCACCACGACGTGGTGATGGTGACGGGGTACGACGAGGCGGTCCAGGTCTTCC ACGACTCGGCGACCTTCTCCTCGTGCGTCTCGGTGACGGGTCCGTTCCCGGGTTTCCCCGTCCCGCTCGAGGGCGACGAC GTCACCGAGCTGATCGAGCGGCACCGCGGTGAGCTGCCGATGAACGACCAGCTCCCCACGCTCGACCCGCCCACGCACAC CGCGCACCGCGCGCTGCTGATGCGGCTGATCACGCCGAAGCGCCTCAAGGAGAACGAGGCGCAGATGTGGCGGCTCGTCG ACCAGATGGTCGAGCCGTACCTGGCCGGCGGCGAGGGCGAGTTCATCACCGGCTTCGCCGGGCCGTTCACCCTGCTGGTG ATCGCCGACCTGCTGGGCGTGCCCGAGGAGGACCAGGAGGAGTTCCTCGACCGCCTCCAGCGCCAGCCGCAGGAGAGCGG CGGCATCGGCAGCACCGGCGACGACCACATGGCGCACAACCCGCTGGAGTTCCTCTACAACAAGTTCACCGCCTACATCG AGGACCGCCGGCGCGAGCCCCGCGAGGACGTCCTCACCGGGCTGGCGCTGGCGACGTTCCCCGACGGGTCGACCCCGGAG GTCATCGACGCCGTCCGGGTCGCGGCCAACCTGTTCTCCGCCGGACAGGAGACCACCGTCCGGCTACTCTCCTCGGCACT GAAGATCCTCGCCGAGGACCGCGAGCTCCAGCAGCTGCTACGGGCCGAGCCGGACCGCGTCGGCAACTTCATCGAGGAGA CGCTGCGGCTGGAGAGCCCGGTCAAGGGCGACTTCCGGCTCTCCCGGGTGCCGACCACCGTCGGCGGCGTCGACCTGCCC GCCGGCACCACGGTCATGGTCGTCAACGGCGCCGCGAACCGCGACCCGCGCCGCTTCGAGAACCCGAGCGTGTTCGACGT CGCCCGCCCGAACGCCCGCCACCACGTGGCGTTCGGCCGTGGCATCCACACCTGCCCCGGCGCCCCGCTCGCCCGCGCCG AGGCGCGTGCGAGCATCGAGCGGCTGCTCGAGCGCACCACCGACATCCGGATCTCCGAAAGCGTGCACGGCCCCGCGGAC GACCGCCGGTACAGCTACCTGCCCACCTTCATCCTGCGTGGGCTGACGCACCTCAACCTCGAGTTCACCCTCGCAGAGAG CAAGACGCCATGA
Upstream 100 bases:
>100_bases AGGAAATTCGTGGCAGTACGTACTCGGACGGGTCGTTTGTCTCGCGCCCGCGCCGGATGGGAGACTTCGGCTGTCGACGT CGAAGGGAGCGGTACAGACC
Downstream 100 bases:
>100_bases AAGTCACCGTTGACGCCGACGGCTGCTGCGGGCATTCCACCTGCTGCACGCTGTGCCCCGAGGTCTTCACCCTCAGCGAC GACGGCTACGCGGTGGTCGA
Product: cytochrome P450
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 430; Mature: 429
Protein sequence:
>430_residues MSELETKDFFRDEELVADPYPFLEAMRGKCPVQRENHHDVVMVTGYDEAVQVFHDSATFSSCVSVTGPFPGFPVPLEGDD VTELIERHRGELPMNDQLPTLDPPTHTAHRALLMRLITPKRLKENEAQMWRLVDQMVEPYLAGGEGEFITGFAGPFTLLV IADLLGVPEEDQEEFLDRLQRQPQESGGIGSTGDDHMAHNPLEFLYNKFTAYIEDRRREPREDVLTGLALATFPDGSTPE VIDAVRVAANLFSAGQETTVRLLSSALKILAEDRELQQLLRAEPDRVGNFIEETLRLESPVKGDFRLSRVPTTVGGVDLP AGTTVMVVNGAANRDPRRFENPSVFDVARPNARHHVAFGRGIHTCPGAPLARAEARASIERLLERTTDIRISESVHGPAD DRRYSYLPTFILRGLTHLNLEFTLAESKTP
Sequences:
>Translated_430_residues MSELETKDFFRDEELVADPYPFLEAMRGKCPVQRENHHDVVMVTGYDEAVQVFHDSATFSSCVSVTGPFPGFPVPLEGDD VTELIERHRGELPMNDQLPTLDPPTHTAHRALLMRLITPKRLKENEAQMWRLVDQMVEPYLAGGEGEFITGFAGPFTLLV IADLLGVPEEDQEEFLDRLQRQPQESGGIGSTGDDHMAHNPLEFLYNKFTAYIEDRRREPREDVLTGLALATFPDGSTPE VIDAVRVAANLFSAGQETTVRLLSSALKILAEDRELQQLLRAEPDRVGNFIEETLRLESPVKGDFRLSRVPTTVGGVDLP AGTTVMVVNGAANRDPRRFENPSVFDVARPNARHHVAFGRGIHTCPGAPLARAEARASIERLLERTTDIRISESVHGPAD DRRYSYLPTFILRGLTHLNLEFTLAESKTP >Mature_429_residues SELETKDFFRDEELVADPYPFLEAMRGKCPVQRENHHDVVMVTGYDEAVQVFHDSATFSSCVSVTGPFPGFPVPLEGDDV TELIERHRGELPMNDQLPTLDPPTHTAHRALLMRLITPKRLKENEAQMWRLVDQMVEPYLAGGEGEFITGFAGPFTLLVI ADLLGVPEEDQEEFLDRLQRQPQESGGIGSTGDDHMAHNPLEFLYNKFTAYIEDRRREPREDVLTGLALATFPDGSTPEV IDAVRVAANLFSAGQETTVRLLSSALKILAEDRELQQLLRAEPDRVGNFIEETLRLESPVKGDFRLSRVPTTVGGVDLPA GTTVMVVNGAANRDPRRFENPSVFDVARPNARHHVAFGRGIHTCPGAPLARAEARASIERLLERTTDIRISESVHGPADD RRYSYLPTFILRGLTHLNLEFTLAESKTP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the cytochrome P450 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001128 - InterPro: IPR002397 - InterPro: IPR017972 [H]
Pfam domain/function: PF00067 p450 [H]
EC number: NA
Molecular weight: Translated: 47957; Mature: 47825
Theoretical pI: Translated: 4.74; Mature: 4.74
Prosite motif: PS00086 CYTOCHROME_P450
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSELETKDFFRDEELVADPYPFLEAMRGKCPVQRENHHDVVMVTGYDEAVQVFHDSATFS CCCCCCHHHHCCCHHCCCCHHHHHHHCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHH SCVSVTGPFPGFPVPLEGDDVTELIERHRGELPMNDQLPTLDPPTHTAHRALLMRLITPK HHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCHH RLKENEAQMWRLVDQMVEPYLAGGEGEFITGFAGPFTLLVIADLLGVPEEDQEEFLDRLQ HHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCHHHHHHHHHHHHCCCCCHHHHHHHHHH RQPQESGGIGSTGDDHMAHNPLEFLYNKFTAYIEDRRREPREDVLTGLALATFPDGSTPE HCCHHCCCCCCCCCCHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHEECCCCCCHH VIDAVRVAANLFSAGQETTVRLLSSALKILAEDRELQQLLRAEPDRVGNFIEETLRLESP HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHHCCC VKGDFRLSRVPTTVGGVDLPAGTTVMVVNGAANRDPRRFENPSVFDVARPNARHHVAFGR CCCCEEEECCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCEEECCCCCCCCEEEECC GIHTCPGAPLARAEARASIERLLERTTDIRISESVHGPADDRRYSYLPTFILRGLTHLNL CCCCCCCCCHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCCHHHHHHHHHCCHHHCCE EFTLAESKTP EEEECCCCCC >Mature Secondary Structure SELETKDFFRDEELVADPYPFLEAMRGKCPVQRENHHDVVMVTGYDEAVQVFHDSATFS CCCCCHHHHCCCHHCCCCHHHHHHHCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHH SCVSVTGPFPGFPVPLEGDDVTELIERHRGELPMNDQLPTLDPPTHTAHRALLMRLITPK HHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCHH RLKENEAQMWRLVDQMVEPYLAGGEGEFITGFAGPFTLLVIADLLGVPEEDQEEFLDRLQ HHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCHHHHHHHHHHHHCCCCCHHHHHHHHHH RQPQESGGIGSTGDDHMAHNPLEFLYNKFTAYIEDRRREPREDVLTGLALATFPDGSTPE HCCHHCCCCCCCCCCHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHEECCCCCCHH VIDAVRVAANLFSAGQETTVRLLSSALKILAEDRELQQLLRAEPDRVGNFIEETLRLESP HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHHCCC VKGDFRLSRVPTTVGGVDLPAGTTVMVVNGAANRDPRRFENPSVFDVARPNARHHVAFGR CCCCEEEECCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCEEECCCCCCCCEEEECC GIHTCPGAPLARAEARASIERLLERTTDIRISESVHGPADDRRYSYLPTFILRGLTHLNL CCCCCCCCCHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCCHHHHHHHHHCCHHHCCE EFTLAESKTP EEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]