| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is uxaC [H]
Identifier: 158315003
GI number: 158315003
Start: 3775791
End: 3777266
Strand: Direct
Name: uxaC [H]
Synonym: Franean1_3197
Alternate gene names: 158315003
Gene position: 3775791-3777266 (Clockwise)
Preceding gene: 158315001
Following gene: 158315004
Centisome position: 42.04
GC content: 71.48
Gene sequence:
>1476_bases GTGGCAGGCAAGTTCGCTGGTGCAGGCAACTCCGCCGTGTCAGGTGGCGTCACCGTGCCGGGTGGTGGTGTCCCGCTCCG CCCGCATCCCGACCGCCTGTTCCCGGTCGACCTGGGGGTGCGGGCGCTCGCCCGGCGGCTGTACGAAGCCGTGCGTGACC TGCCAATCCTTTCCCCGCACGGTCACGTCGACCCCTTCTTGCTGGTACACGACGAGGCGTTCGCGGACCCGGCCAGCCTG CTGATCACTCCGGACCATTACGTGACCCGGCTGCTGCACGCCAGCGGGGTGCCGCTGGCGGAGCTGGGCGTCGGACGCGG CCCGCTGCCCGAGGAACAGGCGCGAGCGGTGTGGCGCACGTTCTGCGAGCACTGGGCCGTGTTCCGCGGCACCCCGGTGC GTTACTGGCTGGAATCCCAGCTGGCCGAGATCTTCGGTGTCACCGAACGGCCCGGTCCCGACAGCGCGGACCGGATCTAC GACCAGGTCGCCGAGCGGCTCGCCGACGAGGCGTATCGACCTCGAGCGCTGTTCCGCCGGTTCGACATCGAGGTTCTGGC CACCACCGACGACCCCTGCAGCGATCTCGCGGCACACCGCGCTCTCACCGCGGATCCGGACTGGCCCGGCCGGGTCATCC CCACCTTCCGCCCCGACCGGTACCTGGAGCCCACCCGAGCGGGCTGGGACGAGGCGGTGCGGCGTCTCGGCGAGGCGGCC GACGCCGACGTCGGTGATTACGACGGCTACGTGCGCGCGCTGGAGGCCCGTCGCCGCTACTTCGCCGAGCACGGTGCCAC GTCCTGCGACCACAGCCATCCGGATGTCCGGACCGATCCGCTGCCGCACGCCGAGGCCGCCAGGATCTTCCGCGCCGCTC TGGCCGGGGAGGCGAGCGAGGCCGAGGCCACCGCGTTCCGCCGGCACATGATCTGCGAGTCGGCGCGGATGTCCTGCGAG GACGGGCTGGTGATGACGCTGCATCCGAGCGTCCGGCGCAACCACCACACCCCGACCCTGCGCCGGTACGGCCCGGACAC CGGGCACGACATCCCGCTGCGAACCGAGTTTACTCAGGCGCTGCAGCCGCTCCTCGATCGTCACGGCACCGATCCCGACT TCCGCCTGGTGCTGTTCACCCTCGACGAGACGGTCTTCTCGCGGGAGATCGCCCCACTCGCGGGCTTCTACCCGGCGGTG TACGTCGGCGCTCCCTGGTGGTTCCTCGACGCGCCGGACTCCATCCGCCGCTTCCGGCGGGCGGTGACCGAGACCGCGGG TTTCACGCGCACCTCCGGCTTCGTGGACGACACGCGTGCCTTCTGCTCCGTGCCGGTCCGCCACGACATGTCCCGTCGGC TCGACTGCGGCGTGCTCGCCGAGCTCGTCGCCGAGCACCGGCTGGAGGAGGACGAGGCCTTCGAGACCGCCGTCGAGCTG GTGGCGGTCAGGCCGCGAGAGGCCTTCCGTCTGTGA
Upstream 100 bases:
>100_bases ACGGCGCGGACAACTTGTGGCAACCGGTTGCCGTCGGGTCGCCGCACCGTCGACGCTCCACACTGTGTCAGGCAACCCCG CCCTGTCAGGTAACTCCAAC
Downstream 100 bases:
>100_bases ACCATTCCGCGGCCGTGCCTGTGAACCGCCCAGTGGCGGCGCCCGCCAGCGGCCCCGTGGCCCCGTCGCCGAGTCGTCCT GCGGCTGTCGCTCGACCGCT
Product: glucuronate isomerase
Products: NA
Alternate protein names: Glucuronate isomerase; Uronic isomerase [H]
Number of amino acids: Translated: 491; Mature: 490
Protein sequence:
>491_residues MAGKFAGAGNSAVSGGVTVPGGGVPLRPHPDRLFPVDLGVRALARRLYEAVRDLPILSPHGHVDPFLLVHDEAFADPASL LITPDHYVTRLLHASGVPLAELGVGRGPLPEEQARAVWRTFCEHWAVFRGTPVRYWLESQLAEIFGVTERPGPDSADRIY DQVAERLADEAYRPRALFRRFDIEVLATTDDPCSDLAAHRALTADPDWPGRVIPTFRPDRYLEPTRAGWDEAVRRLGEAA DADVGDYDGYVRALEARRRYFAEHGATSCDHSHPDVRTDPLPHAEAARIFRAALAGEASEAEATAFRRHMICESARMSCE DGLVMTLHPSVRRNHHTPTLRRYGPDTGHDIPLRTEFTQALQPLLDRHGTDPDFRLVLFTLDETVFSREIAPLAGFYPAV YVGAPWWFLDAPDSIRRFRRAVTETAGFTRTSGFVDDTRAFCSVPVRHDMSRRLDCGVLAELVAEHRLEEDEAFETAVEL VAVRPREAFRL
Sequences:
>Translated_491_residues MAGKFAGAGNSAVSGGVTVPGGGVPLRPHPDRLFPVDLGVRALARRLYEAVRDLPILSPHGHVDPFLLVHDEAFADPASL LITPDHYVTRLLHASGVPLAELGVGRGPLPEEQARAVWRTFCEHWAVFRGTPVRYWLESQLAEIFGVTERPGPDSADRIY DQVAERLADEAYRPRALFRRFDIEVLATTDDPCSDLAAHRALTADPDWPGRVIPTFRPDRYLEPTRAGWDEAVRRLGEAA DADVGDYDGYVRALEARRRYFAEHGATSCDHSHPDVRTDPLPHAEAARIFRAALAGEASEAEATAFRRHMICESARMSCE DGLVMTLHPSVRRNHHTPTLRRYGPDTGHDIPLRTEFTQALQPLLDRHGTDPDFRLVLFTLDETVFSREIAPLAGFYPAV YVGAPWWFLDAPDSIRRFRRAVTETAGFTRTSGFVDDTRAFCSVPVRHDMSRRLDCGVLAELVAEHRLEEDEAFETAVEL VAVRPREAFRL >Mature_490_residues AGKFAGAGNSAVSGGVTVPGGGVPLRPHPDRLFPVDLGVRALARRLYEAVRDLPILSPHGHVDPFLLVHDEAFADPASLL ITPDHYVTRLLHASGVPLAELGVGRGPLPEEQARAVWRTFCEHWAVFRGTPVRYWLESQLAEIFGVTERPGPDSADRIYD QVAERLADEAYRPRALFRRFDIEVLATTDDPCSDLAAHRALTADPDWPGRVIPTFRPDRYLEPTRAGWDEAVRRLGEAAD ADVGDYDGYVRALEARRRYFAEHGATSCDHSHPDVRTDPLPHAEAARIFRAALAGEASEAEATAFRRHMICESARMSCED GLVMTLHPSVRRNHHTPTLRRYGPDTGHDIPLRTEFTQALQPLLDRHGTDPDFRLVLFTLDETVFSREIAPLAGFYPAVY VGAPWWFLDAPDSIRRFRRAVTETAGFTRTSGFVDDTRAFCSVPVRHDMSRRLDCGVLAELVAEHRLEEDEAFETAVELV AVRPREAFRL
Specific function: Hexuronate conversion to KDG. [C]
COG id: COG1904
COG function: function code G; Glucuronate isomerase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the uronate isomerase family [H]
Homologues:
Organism=Escherichia coli, GI2367192, Length=430, Percent_Identity=27.2093023255814, Blast_Score=165, Evalue=7e-42,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003766 - InterPro: IPR023177 [H]
Pfam domain/function: PF02614 UxaC [H]
EC number: =5.3.1.12 [H]
Molecular weight: Translated: 54815; Mature: 54684
Theoretical pI: Translated: 5.89; Mature: 5.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGKFAGAGNSAVSGGVTVPGGGVPLRPHPDRLFPVDLGVRALARRLYEAVRDLPILSPH CCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHCCCCCCCC GHVDPFLLVHDEAFADPASLLITPDHYVTRLLHASGVPLAELGVGRGPLPEEQARAVWRT CCCCCEEEEECHHHCCCCCEEECCHHHHHHHHHHCCCCHHHHCCCCCCCCHHHHHHHHHH FCEHWAVFRGTPVRYWLESQLAEIFGVTERPGPDSADRIYDQVAERLADEAYRPRALFRR HHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHH FDIEVLATTDDPCSDLAAHRALTADPDWPGRVIPTFRPDRYLEPTRAGWDEAVRRLGEAA HCEEEEEECCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHC DADVGDYDGYVRALEARRRYFAEHGATSCDHSHPDVRTDPLPHAEAARIFRAALAGEASE CCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCH AEATAFRRHMICESARMSCEDGLVMTLHPSVRRNHHTPTLRRYGPDTGHDIPLRTEFTQA HHHHHHHHHHHHHHHHCCCCCCEEEEECHHHHCCCCCCCHHHCCCCCCCCCCCHHHHHHH LQPLLDRHGTDPDFRLVLFTLDETVFSREIAPLAGFYPAVYVGAPWWFLDAPDSIRRFRR HHHHHHHCCCCCCCEEEEEEHHHHHHHHHHHHHHHCCCHHHCCCCEEEECCCHHHHHHHH AVTETAGFTRTSGFVDDTRAFCSVPVRHDMSRRLDCGVLAELVAEHRLEEDEAFETAVEL HHHHHCCCCCCCCCCHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHH VAVRPREAFRL HHCCCHHHHCC >Mature Secondary Structure AGKFAGAGNSAVSGGVTVPGGGVPLRPHPDRLFPVDLGVRALARRLYEAVRDLPILSPH CCCCCCCCCCCCCCCEECCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHCCCCCCCC GHVDPFLLVHDEAFADPASLLITPDHYVTRLLHASGVPLAELGVGRGPLPEEQARAVWRT CCCCCEEEEECHHHCCCCCEEECCHHHHHHHHHHCCCCHHHHCCCCCCCCHHHHHHHHHH FCEHWAVFRGTPVRYWLESQLAEIFGVTERPGPDSADRIYDQVAERLADEAYRPRALFRR HHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHH FDIEVLATTDDPCSDLAAHRALTADPDWPGRVIPTFRPDRYLEPTRAGWDEAVRRLGEAA HCEEEEEECCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHC DADVGDYDGYVRALEARRRYFAEHGATSCDHSHPDVRTDPLPHAEAARIFRAALAGEASE CCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCH AEATAFRRHMICESARMSCEDGLVMTLHPSVRRNHHTPTLRRYGPDTGHDIPLRTEFTQA HHHHHHHHHHHHHHHHCCCCCCEEEEECHHHHCCCCCCCHHHCCCCCCCCCCCHHHHHHH LQPLLDRHGTDPDFRLVLFTLDETVFSREIAPLAGFYPAVYVGAPWWFLDAPDSIRRFRR HHHHHHHCCCCCCCEEEEEEHHHHHHHHHHHHHHHCCCHHHCCCCEEEECCCHHHHHHHH AVTETAGFTRTSGFVDDTRAFCSVPVRHDMSRRLDCGVLAELVAEHRLEEDEAFETAVEL HHHHHCCCCCCCCCCHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHH VAVRPREAFRL HHCCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA