Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

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The map label for this gene is 158314982

Identifier: 158314982

GI number: 158314982

Start: 3741592

End: 3741732

Strand: Direct

Name: 158314982

Synonym: Franean1_3175

Alternate gene names: NA

Gene position: 3741592-3741732 (Clockwise)

Preceding gene: 158314971

Following gene: 158314984

Centisome position: 41.66

GC content: 68.09

Gene sequence:

>141_bases
ATGCGCTGGCGGATCGAGCACGACTACCGCGAGCTCAAAGACGACCTCGGCCTGGACCACTTCGAGGGCCGGTCCTGGAT
CGGCTGGCACCGCCACGTCACCCTCGCCTGCCTGGCCCAGGCCCTGCGTACCCAGCTATGA

Upstream 100 bases:

>100_bases
CCTCGCCGAATGGCCCGCCGGGCAGGCTGAACCCACCGACTACTGGCTGTCCACCCTGCCCGCAGACATCCCCCTACGCC
AGCTCGTCCGTCTCGCGAAG

Downstream 100 bases:

>100_bases
CGCACCCCAAAAGACCCTGCGCCGGCCTGACCCTACGGAGTCCTTCGTACCCTCCAGACCCTGCTCAACGTCTGAACCGG
CGCCTGCCGCACCTGCCACC

Product: transposase, IS4

Products: NA

Alternate protein names: IS4 Family Transposase; Transposase IS4 Family Protein

Number of amino acids: Translated: 46; Mature: 46

Protein sequence:

>46_residues
MRWRIEHDYRELKDDLGLDHFEGRSWIGWHRHVTLACLAQALRTQL

Sequences:

>Translated_46_residues
MRWRIEHDYRELKDDLGLDHFEGRSWIGWHRHVTLACLAQALRTQL
>Mature_46_residues
MRWRIEHDYRELKDDLGLDHFEGRSWIGWHRHVTLACLAQALRTQL

Specific function: Unknown

COG id: COG5659

COG function: function code L; FOG: Transposase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 5630; Mature: 5630

Theoretical pI: Translated: 7.69; Mature: 7.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRWRIEHDYRELKDDLGLDHFEGRSWIGWHRHVTLACLAQALRTQL
CCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MRWRIEHDYRELKDDLGLDHFEGRSWIGWHRHVTLACLAQALRTQL
CCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA