| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158314735
Identifier: 158314735
GI number: 158314735
Start: 3433355
End: 3434005
Strand: Direct
Name: 158314735
Synonym: Franean1_2916
Alternate gene names: NA
Gene position: 3433355-3434005 (Clockwise)
Preceding gene: 158314733
Following gene: 158314740
Centisome position: 38.22
GC content: 63.59
Gene sequence:
>651_bases ATGGCACAGCTGACCCGGGCAGAGATCATCGATGCCGCGGTCGAGCTTCTCGATCAGGGCGTCGAGGCGCTCACCATGCG GTCGCTGGCGGATCGACTGAGCGTGACGGCGGCGGCGCTTTACTACTGGTTCCCAGCGAAGGCTCAGCTGCTGGACGCAA TCGCGGAGCACGTCGCCGCGCAGATCGTCGCGACGAAGGAGCGCGGCGCGTCATGGGAGGACAGACTGCGATCTCTCGCG ATGGCTGTTTTCGATGCCGCGGAGCATCACCCGGCTACCTTCAACTGGGTCTTCCGTAATTATGCGATGCAGCCTCCACT GGCTAAGATCGACGAGGCCATGCTGGACGTTCTGATGGACGCGGGCTTCGGTGCCCGAGAGGCGGTGTTGGCCAAGAGTA CAATCCTTCGACTCGTCGTCGGTCACCTCGGGCTAGTCGTCCTACCGAACCACATAGACCCGTCCAGCGTGGATGTGGAG TCCTATCCCCGTGCCCATCAAGTCGCGAGCGCGAGCGCTCAGCTCTCGCCCGGCGACTTCCTGGAATATGGGCTCGACCA CGTCATCGCCAGTTTTGGATCGCCGCGCCGGGGCCGCCAGGGAGATTCTCCCTCGGGCTCTCGCACCAGCTCTGCGAACG GGCAAATCTGA
Upstream 100 bases:
>100_bases ACGCCCTCGGTGCTACTGGGGGCGAGGCGGCTCATGCGGAAGGGCGACAGGTCCCGGCTGCCCGCCGGTAGCGACGACTC TGTGAGCTAGGGTTCCGGAC
Downstream 100 bases:
>100_bases GCCCCCGCGTCCCCGTGGCGCAGTCCGTCGGTGGAGGACGCCCACGGGGATAGCGGTTAGTGGTCCACTGAAGGGGCGTA GGCGCGCATCATGGCGCCGC
Product: TetR family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator TetR Family; Regulatory Protein TetR
Number of amino acids: Translated: 216; Mature: 215
Protein sequence:
>216_residues MAQLTRAEIIDAAVELLDQGVEALTMRSLADRLSVTAAALYYWFPAKAQLLDAIAEHVAAQIVATKERGASWEDRLRSLA MAVFDAAEHHPATFNWVFRNYAMQPPLAKIDEAMLDVLMDAGFGAREAVLAKSTILRLVVGHLGLVVLPNHIDPSSVDVE SYPRAHQVASASAQLSPGDFLEYGLDHVIASFGSPRRGRQGDSPSGSRTSSANGQI
Sequences:
>Translated_216_residues MAQLTRAEIIDAAVELLDQGVEALTMRSLADRLSVTAAALYYWFPAKAQLLDAIAEHVAAQIVATKERGASWEDRLRSLA MAVFDAAEHHPATFNWVFRNYAMQPPLAKIDEAMLDVLMDAGFGAREAVLAKSTILRLVVGHLGLVVLPNHIDPSSVDVE SYPRAHQVASASAQLSPGDFLEYGLDHVIASFGSPRRGRQGDSPSGSRTSSANGQI >Mature_215_residues AQLTRAEIIDAAVELLDQGVEALTMRSLADRLSVTAAALYYWFPAKAQLLDAIAEHVAAQIVATKERGASWEDRLRSLAM AVFDAAEHHPATFNWVFRNYAMQPPLAKIDEAMLDVLMDAGFGAREAVLAKSTILRLVVGHLGLVVLPNHIDPSSVDVES YPRAHQVASASAQLSPGDFLEYGLDHVIASFGSPRRGRQGDSPSGSRTSSANGQI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23293; Mature: 23161
Theoretical pI: Translated: 5.55; Mature: 5.55
Prosite motif: PS50977 HTH_TETR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAQLTRAEIIDAAVELLDQGVEALTMRSLADRLSVTAAALYYWFPAKAQLLDAIAEHVAA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH QIVATKERGASWEDRLRSLAMAVFDAAEHHPATFNWVFRNYAMQPPLAKIDEAMLDVLMD HHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHH AGFGAREAVLAKSTILRLVVGHLGLVVLPNHIDPSSVDVESYPRAHQVASASAQLSPGDF CCCCHHHHHHHHHHHHHHHHHHHCEEEECCCCCCCCCCHHHCCHHHHHHHCCCCCCCHHH LEYGLDHVIASFGSPRRGRQGDSPSGSRTSSANGQI HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure AQLTRAEIIDAAVELLDQGVEALTMRSLADRLSVTAAALYYWFPAKAQLLDAIAEHVAA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH QIVATKERGASWEDRLRSLAMAVFDAAEHHPATFNWVFRNYAMQPPLAKIDEAMLDVLMD HHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHH AGFGAREAVLAKSTILRLVVGHLGLVVLPNHIDPSSVDVESYPRAHQVASASAQLSPGDF CCCCHHHHHHHHHHHHHHHHHHHCEEEECCCCCCCCCCHHHCCHHHHHHHCCCCCCCHHH LEYGLDHVIASFGSPRRGRQGDSPSGSRTSSANGQI HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA