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The map label for this gene is ydhO [H]

Identifier: 158314571

GI number: 158314571

Start: 3251897

End: 3252880

Strand: Direct

Name: ydhO [H]

Synonym: Franean1_2747

Alternate gene names: 158314571

Gene position: 3251897-3252880 (Clockwise)

Preceding gene: 158314570

Following gene: 158314573

Centisome position: 36.2

GC content: 65.45

Gene sequence:

>984_bases
GTGATGATGGGGGCCGCCGCCGCGGGGGTGGCCGAACGGGTCCTGTGCCTGCCGGTCCTCGGCTGGTTCCTCGGCTGCTC
CAGCGGCGGCAGTCCCAGTCAGACCGCGTTCGACGACATCCCGCCCGATTACCTGAACCTCTACATGCAGGCCGCACCGA
CCTGCCCCGGTTTGTCCTGGACGACCCTCGCCGCCATCGGCAAAGTCGAATCCGATCATGGTCGGAGTCGGCTGCCGGGT
GTGGTCAGCGGCACCAACAGCGCTGGGGCCGGCGGTCCGATGCAGTTCCTCGCCCCGACGTTCGCCGAGGTCGTCGCCCA
CCACCCGCTCCCGGCGGGCGGCGCGAACCCGCCGTCGCTCTACAACGCCCAGGACGCTGTCTACGCCGCCGCGTTCTACC
TGTGCGACAACCATGTCGCCACCGACCTGACCGGCGCCTTATGGGCGTACAACCATGACGATTCCTACATCGCGCAGGTC
GTCACCCAGGCCACTCAGTACTCTCAACCGAACTCGAACGCTTCAGTAGCGTGCCCTACATTTCAGTCAACGGTTCAGTC
CGGAACCGACCAGTTCAGTAGCCGCGCCGCGTTCATTGCAGTGATCTTCGCCTGCGAGCAGATCGGTAAACCTTATGTAT
GGGGTGGCAACGGCGATCCGGGGTTCGATTGCTCGGGGCTGACGCACGCGGCGTACGCCGCGGCGGGCATCCAGATGCCC
CGTACCGCACAGGCCCAGTATGACGCTGCCCCGAGGCTGCGGACCGGGCCGCCGCTCCAATCTGGGGATCTCGTGTTTTT
CGGAACGGGTCCAAACACCGTCACGCATGTCGGCATCTACCTGGCAATGCATGCCGGTCAAACGATGATGGTCGACGCTC
CCCACGAGGGCGCCGCCGTCCGCGTCGAATCCTTCCCTTTCACTGTTGGCGCACGATGGGGATCAGATGTCTATCTCGGT
GCCGCAACACCGCGGGGCCTCTAA

Upstream 100 bases:

>100_bases
CCTGCGTCCACCCACGCCGATGCCTCCCAGCGATACCGGGGGGTGAGCGGCCACGACCAAGTACCTCGCCGGCGCCGTCG
CCGCGGTGATCCTTCTCATT

Downstream 100 bases:

>100_bases
ACTTGGCCCGTCTCACCGCGCCGCCAGGGTTGCCGGCATGCGGAATCGAAACCGAACAATCAACGACCATAGAATAGTCA
TCACGTATCAGCCGCCGTCA

Product: NLP/P60 protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 327; Mature: 327

Protein sequence:

>327_residues
MMMGAAAAGVAERVLCLPVLGWFLGCSSGGSPSQTAFDDIPPDYLNLYMQAAPTCPGLSWTTLAAIGKVESDHGRSRLPG
VVSGTNSAGAGGPMQFLAPTFAEVVAHHPLPAGGANPPSLYNAQDAVYAAAFYLCDNHVATDLTGALWAYNHDDSYIAQV
VTQATQYSQPNSNASVACPTFQSTVQSGTDQFSSRAAFIAVIFACEQIGKPYVWGGNGDPGFDCSGLTHAAYAAAGIQMP
RTAQAQYDAAPRLRTGPPLQSGDLVFFGTGPNTVTHVGIYLAMHAGQTMMVDAPHEGAAVRVESFPFTVGARWGSDVYLG
AATPRGL

Sequences:

>Translated_327_residues
MMMGAAAAGVAERVLCLPVLGWFLGCSSGGSPSQTAFDDIPPDYLNLYMQAAPTCPGLSWTTLAAIGKVESDHGRSRLPG
VVSGTNSAGAGGPMQFLAPTFAEVVAHHPLPAGGANPPSLYNAQDAVYAAAFYLCDNHVATDLTGALWAYNHDDSYIAQV
VTQATQYSQPNSNASVACPTFQSTVQSGTDQFSSRAAFIAVIFACEQIGKPYVWGGNGDPGFDCSGLTHAAYAAAGIQMP
RTAQAQYDAAPRLRTGPPLQSGDLVFFGTGPNTVTHVGIYLAMHAGQTMMVDAPHEGAAVRVESFPFTVGARWGSDVYLG
AATPRGL
>Mature_327_residues
MMMGAAAAGVAERVLCLPVLGWFLGCSSGGSPSQTAFDDIPPDYLNLYMQAAPTCPGLSWTTLAAIGKVESDHGRSRLPG
VVSGTNSAGAGGPMQFLAPTFAEVVAHHPLPAGGANPPSLYNAQDAVYAAAFYLCDNHVATDLTGALWAYNHDDSYIAQV
VTQATQYSQPNSNASVACPTFQSTVQSGTDQFSSRAAFIAVIFACEQIGKPYVWGGNGDPGFDCSGLTHAAYAAAGIQMP
RTAQAQYDAAPRLRTGPPLQSGDLVFFGTGPNTVTHVGIYLAMHAGQTMMVDAPHEGAAVRVESFPFTVGARWGSDVYLG
AATPRGL

Specific function: Unknown

COG id: COG0791

COG function: function code M; Cell wall-associated hydrolases (invasion-associated proteins)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nlpC/p60 family [H]

Homologues:

Organism=Escherichia coli, GI1787944, Length=117, Percent_Identity=41.8803418803419, Blast_Score=81, Evalue=8e-17,
Organism=Escherichia coli, GI1786421, Length=129, Percent_Identity=35.6589147286822, Blast_Score=70, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000064 [H]

Pfam domain/function: PF00877 NLPC_P60 [H]

EC number: NA

Molecular weight: Translated: 33971; Mature: 33971

Theoretical pI: Translated: 5.15; Mature: 5.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMMGAAAAGVAERVLCLPVLGWFLGCSSGGSPSQTAFDDIPPDYLNLYMQAAPTCPGLSW
CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCH
TTLAAIGKVESDHGRSRLPGVVSGTNSAGAGGPMQFLAPTFAEVVAHHPLPAGGANPPSL
HHHHHHHCCCCCCCCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCC
YNAQDAVYAAAFYLCDNHVATDLTGALWAYNHDDSYIAQVVTQATQYSQPNSNASVACPT
CCCHHHHHHHHHHHHCCCHHHHCCHHHEEECCCHHHHHHHHHHHHHCCCCCCCCEEECCH
FQSTVQSGTDQFSSRAAFIAVIFACEQIGKPYVWGGNGDPGFDCSGLTHAAYAAAGIQMP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCHHHHHHHHCCCCC
RTAQAQYDAAPRLRTGPPLQSGDLVFFGTGPNTVTHVGIYLAMHAGQTMMVDAPHEGAAV
CCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHEEEEEEEECCCEEEEECCCCCCEE
RVESFPFTVGARWGSDVYLGAATPRGL
EEECCCEEEECCCCCCEEEECCCCCCC
>Mature Secondary Structure
MMMGAAAAGVAERVLCLPVLGWFLGCSSGGSPSQTAFDDIPPDYLNLYMQAAPTCPGLSW
CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCH
TTLAAIGKVESDHGRSRLPGVVSGTNSAGAGGPMQFLAPTFAEVVAHHPLPAGGANPPSL
HHHHHHHCCCCCCCCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCC
YNAQDAVYAAAFYLCDNHVATDLTGALWAYNHDDSYIAQVVTQATQYSQPNSNASVACPT
CCCHHHHHHHHHHHHCCCHHHHCCHHHEEECCCHHHHHHHHHHHHHCCCCCCCCEEECCH
FQSTVQSGTDQFSSRAAFIAVIFACEQIGKPYVWGGNGDPGFDCSGLTHAAYAAAGIQMP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCHHHHHHHHCCCCC
RTAQAQYDAAPRLRTGPPLQSGDLVFFGTGPNTVTHVGIYLAMHAGQTMMVDAPHEGAAV
CCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHEEEEEEEECCCEEEEECCCCCCEE
RVESFPFTVGARWGSDVYLGAATPRGL
EEECCCEEEECCCCCCEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]