| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158314570
Identifier: 158314570
GI number: 158314570
Start: 3250826
End: 3251842
Strand: Direct
Name: 158314570
Synonym: Franean1_2746
Alternate gene names: NA
Gene position: 3250826-3251842 (Clockwise)
Preceding gene: 158314569
Following gene: 158314571
Centisome position: 36.19
GC content: 72.86
Gene sequence:
>1017_bases ATGGTCGCCTACCCACATCCCCAACGTGCCCTGCGCATCCCGCCCCGCGCCCCCGGCCGGGTCGTCGCCGACGCCGCGCT GGTCACCTACCTCGCCCGCCACCTCTCCCCCCGCGACAGGTGGATCACCCGGCTCGCCCACGAGCACCGGGTACTGACCA CCCACCAGATCGTCGAGGTCGGCTGGTCCACCCAGCGGGCTGCGAACCGCCGGCTCCTGGAGCTCTACCGGTGGCGGGTC CTCGACCGCTTCCAACCCCTGGTCCCCGTCGGGCAGGGACAGCCTCCGGCCCACTACGTCTGTGACATCGCCGGCGCCAG CGTGCTCGCCGCCGAGGACAGCATCGAGTTGAAGGAGACCGGTTATCGCCATACCCGCGCGATGGCCATCGCGCACTCCC TGCGGCTGGCGCACACCGTCGCGGTCAACGGCTTCTTCACCGCCCTGATCGCCCACGCCCGCCGCCCCACGCCACCCGGC ACCCTCACGGCCTGGTGGTCGGAGACCCGCTGCCAGCAGGCTTTCGGGGACCTCGTCCGCCCCGACGCCTACGGCCGCTG GACCTCCGCACGAGGCGAGATCGAATGGTTCCTCGAACTCGACTGGGCGACCGAACAGCTCAACCGGCTCGCCCTGAAGA TCGGGGACTACGGGCGGCTCGCCGCGGCGACGAGGATCAGTACTCCGGTGCTGTTCTGGTTCCCCACCGCAGGGCGCGAG ACCAACGCCCGCCGCGCACTGGCCGCGGCGCTGACCGGGCTCGGCCAGCCCGACATGGTCCCGGTCGCCACCACCGCCGC CACCCTCGCACCCGCCGGCGCCCAGCTCGATCCCACGCTTCCCCGCTGGCTGCCCCTGACTACGACCCGCGGCGGCCGAC TCCCCCTCGAACAGCTCACCTCCGCCTGGCCCCGGCTACGACCCCCCGACCCGCTCGACGGCCGATCGGGTGATACCCCA GCAGGGCCGGGCCTGCGTCCACCCACGCCGATGCCTCCCAGCGATACCGGGGGGTGA
Upstream 100 bases:
>100_bases CGCCGCGCGCCCACCCCCACACCGACGCCGCCGGACCCGGCGGCCCCGCAGCCGCAGGCCGACCCCCGCCGATCCGCCCG CTGACCACCACGGAGATCTC
Downstream 100 bases:
>100_bases GCGGCCACGACCAAGTACCTCGCCGGCGCCGTCGCCGCGGTGATCCTTCTCATTGTGATGATGGGGGCCGCCGCCGCGGG GGTGGCCGAACGGGTCCTGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 338; Mature: 338
Protein sequence:
>338_residues MVAYPHPQRALRIPPRAPGRVVADAALVTYLARHLSPRDRWITRLAHEHRVLTTHQIVEVGWSTQRAANRRLLELYRWRV LDRFQPLVPVGQGQPPAHYVCDIAGASVLAAEDSIELKETGYRHTRAMAIAHSLRLAHTVAVNGFFTALIAHARRPTPPG TLTAWWSETRCQQAFGDLVRPDAYGRWTSARGEIEWFLELDWATEQLNRLALKIGDYGRLAAATRISTPVLFWFPTAGRE TNARRALAAALTGLGQPDMVPVATTAATLAPAGAQLDPTLPRWLPLTTTRGGRLPLEQLTSAWPRLRPPDPLDGRSGDTP AGPGLRPPTPMPPSDTGG
Sequences:
>Translated_338_residues MVAYPHPQRALRIPPRAPGRVVADAALVTYLARHLSPRDRWITRLAHEHRVLTTHQIVEVGWSTQRAANRRLLELYRWRV LDRFQPLVPVGQGQPPAHYVCDIAGASVLAAEDSIELKETGYRHTRAMAIAHSLRLAHTVAVNGFFTALIAHARRPTPPG TLTAWWSETRCQQAFGDLVRPDAYGRWTSARGEIEWFLELDWATEQLNRLALKIGDYGRLAAATRISTPVLFWFPTAGRE TNARRALAAALTGLGQPDMVPVATTAATLAPAGAQLDPTLPRWLPLTTTRGGRLPLEQLTSAWPRLRPPDPLDGRSGDTP AGPGLRPPTPMPPSDTGG >Mature_338_residues MVAYPHPQRALRIPPRAPGRVVADAALVTYLARHLSPRDRWITRLAHEHRVLTTHQIVEVGWSTQRAANRRLLELYRWRV LDRFQPLVPVGQGQPPAHYVCDIAGASVLAAEDSIELKETGYRHTRAMAIAHSLRLAHTVAVNGFFTALIAHARRPTPPG TLTAWWSETRCQQAFGDLVRPDAYGRWTSARGEIEWFLELDWATEQLNRLALKIGDYGRLAAATRISTPVLFWFPTAGRE TNARRALAAALTGLGQPDMVPVATTAATLAPAGAQLDPTLPRWLPLTTTRGGRLPLEQLTSAWPRLRPPDPLDGRSGDTP AGPGLRPPTPMPPSDTGG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37195; Mature: 37195
Theoretical pI: Translated: 10.89; Mature: 10.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVAYPHPQRALRIPPRAPGRVVADAALVTYLARHLSPRDRWITRLAHEHRVLTTHQIVEV CCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH GWSTQRAANRRLLELYRWRVLDRFQPLVPVGQGQPPAHYVCDIAGASVLAAEDSIELKET CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHEEEECCCCEEEECCCCCHHHHC GYRHTRAMAIAHSLRLAHTVAVNGFFTALIAHARRPTPPGTLTAWWSETRCQQAFGDLVR CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHHHCC PDAYGRWTSARGEIEWFLELDWATEQLNRLALKIGDYGRLAAATRISTPVLFWFPTAGRE CCCCCCCCCCCCCEEEEEEECHHHHHHHHHHHHCCCCCHHHHHHHCCCCEEEEECCCCCC TNARRALAAALTGLGQPDMVPVATTAATLAPAGAQLDPTLPRWLPLTTTRGGRLPLEQLT CHHHHHHHHHHHCCCCCCCEEHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCCCCHHHHH SAWPRLRPPDPLDGRSGDTPAGPGLRPPTPMPPSDTGG HHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MVAYPHPQRALRIPPRAPGRVVADAALVTYLARHLSPRDRWITRLAHEHRVLTTHQIVEV CCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH GWSTQRAANRRLLELYRWRVLDRFQPLVPVGQGQPPAHYVCDIAGASVLAAEDSIELKET CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHEEEECCCCEEEECCCCCHHHHC GYRHTRAMAIAHSLRLAHTVAVNGFFTALIAHARRPTPPGTLTAWWSETRCQQAFGDLVR CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHHHCC PDAYGRWTSARGEIEWFLELDWATEQLNRLALKIGDYGRLAAATRISTPVLFWFPTAGRE CCCCCCCCCCCCCEEEEEEECHHHHHHHHHHHHCCCCCHHHHHHHCCCCEEEEECCCCCC TNARRALAAALTGLGQPDMVPVATTAATLAPAGAQLDPTLPRWLPLTTTRGGRLPLEQLT CHHHHHHHHHHHCCCCCCCEEHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCCCCHHHHH SAWPRLRPPDPLDGRSGDTPAGPGLRPPTPMPPSDTGG HHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA