| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158314566
Identifier: 158314566
GI number: 158314566
Start: 3242890
End: 3245040
Strand: Direct
Name: 158314566
Synonym: Franean1_2742
Alternate gene names: NA
Gene position: 3242890-3245040 (Clockwise)
Preceding gene: 158314565
Following gene: 158314567
Centisome position: 36.1
GC content: 73.59
Gene sequence:
>2151_bases GTGACCGCTGCCGCCTCCTGCCGCCGCGTCCTGCCGTCCGGCACGGCGGGTTCGTCGCCTGGTCAGACGCGCCGCCGGCT GGGTTTGTCTCGGCGCCGCGACCGCGGGCGTTGCCGGGGGCTGCTGCTGGCCGGGACGGCGGCGTTCACGCTGCTGCTGG TTGTCGTGCTTCCCTCGGTAGCCTCCGCGGCCCCCGCGCCACCGGTTCCTGCGCCTGCGCCGTCCACCGACACGCCCGCC CCTACCGGTCCCACCCCGAACCCGCAGCCTGGGCCGTCCCCGGTTCCGCCGGGCCAGGAAGCGCCGGCCACGCCGGCTCC CTCCGGCGGGGATGCCACGCCCGCGCCCGACACTCCGGACACCCCGCCCGACGATGGCGGCAACGACGGTCCCGCCGAGC CGTGCCCGGCCGACAACCCGGACTGCGCCACCACCCCGGAGATCCCGCCGCCACCGAGGCCGCAGACAACACCCCCGGCG CCGGACACCGGCGGCGATGGCGGCGGGATCGTCGGGTGGATCACCGACGCGATCAACGACGCCATCACCGCGTTCTTCCG AACTCTGGTGACCGCCGCGCTCAACCCGCTACTGGAACTCCTCGGCCGCACGCTGCTGACCACCCCAGAACCGTCCGAGC TTCCCGCGATCGGGGAATTGTGGTCGACGTCGTGGGCGATCAGCGTCGCCGCCTACGGCACGCTGATCATGTTCGGTGGG ATCACGGTCATGGCGCTGGGCACGGTCCAGTCCCGTATCTCGATCAAAGAGGTCGCCCCTCGTATCCCGATCGGTTTCCT CGCCGCCGGGCTGTCGCAGTTCCTGGCGACGAAGGCCATCCAGATCGCGAACGTGCTACCCGGCGCGATCCTGAGCGAGG GGTTGAACCCGGACACCGCCGCCGGGCAGCTGAAGACCATCATCCTGGTGGCGATCGTGCCGACGCCCGGCGGCTTCGGC AAGAGCATCTTCGTCATCTTCCTTGGCCTGTTCCTCGCCGGATCGGTCGTGGCGCTGCTGTGTACCTATATCGCCCGGGT CGTCATCGAGGTGGCGCTCATCGGCGCGGCACCCCTGGCGTTGGCTGGGCACGGCCATCCGCTGACCGAGAAGGTGGCGT TCTGGTGGTGGCGGGCGTTCTTCGGTTGCCTGGGTATCCAGATCGCCCAGTCGTTCGTCCTGATCGCCTCGTTCAAGGTG TTCTTCACTCCGGGCGGGTTCACCATCTTCGGCCCGACGCCGGACGGGGTCGTGAACCTGCTGGCCGCGATCACCCTGAT CTACTTCCTGTTCAAGATTCCGTTCTGGTTGATGCCGCGGATCGGCCACGGTGGTGGCGGCATTCTTGGCCGGGTCGTGC GCGCCTACGTCATAGGCCGGGCGCTGGGATTCCTCGGTGGCCGCTTCGGACGCGGCGGCGCCGGACGCGCGGGCTCACGG GCCGGCCGAGGCCGCGGCGGACGCGGCCGGGGTCGGGGTGGACGCGGAAGGGGCCGGCCGGGCGGAGGCCCGGGAAGCGG ACCGTCCGACCCGTACCACCATGTCGAGGCCGATGCCGACGGGCAGCTACTCCTCCCGCTGACCAGGGTGCCCCGGGTCC GCCGGCCGGGACCGGCCCGGGGCGCGCCCCGCCCGCCCCGGCCAACGGGCCTGGCGGGCCGGTCCCGGCTGCGGCACCGC CAGCTGACCATCCCGTTCGGCCAAGCCGTCGCCCCGGGCGGGCGGTACCTGCCCCGCGACGGCGGTGCGTGGGTGGACCG TGACGGCCAGCTACTGCTGCCGTTCGAGGTCGACCAGCCCCGCTCTCCGACCGCGGCCCCTGCGCCTGCCCGGCGTCCGG CCTCGGCGCGGGCTGGTGCGGGCCGGTCAGGTCCCGGCCGGCCGGCACCGTCTCGGCCAGCACCGCCGAAGGCCCGGCAG CCGGAGCTCCCGTTCGACCCCTACCGGGGCATCCGCCCGGACCGCACCGGCCAGTACGCCCTCCCCTTGGAGGGCTTGCA GCGCACCCCACGCCCCACCCGGCCGGCCCCGCCTGTGCCGCGGGCGGCATCCCGTCCGACCTCGCCGGCGCGGCCGGTCC CGCCGCGCTACTGGCAGCAGCTGTTGCCGAACATGCCCCGCCGCCCCCGCCCACCCCGCAACGGAAAGTGA
Upstream 100 bases:
>100_bases GGCCAAGGACGCATTCCGGAACGCCGGCTGGGGTTACGGGCTGGCCGCGCTCGCGCCGGTCGTCGTCGGGATCCTCAAGC AGATCGTCGGGGGCTAGGCC
Downstream 100 bases:
>100_bases TCAGCCCCGATGACACATCCGGTAAGGATTCCCGCTGATGTTGATCGTGAGGACAGGATCGTGGCGAATTTGACCGCCCG CCAGGTCCTGATCCTCACGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 716; Mature: 715
Protein sequence:
>716_residues MTAAASCRRVLPSGTAGSSPGQTRRRLGLSRRRDRGRCRGLLLAGTAAFTLLLVVVLPSVASAAPAPPVPAPAPSTDTPA PTGPTPNPQPGPSPVPPGQEAPATPAPSGGDATPAPDTPDTPPDDGGNDGPAEPCPADNPDCATTPEIPPPPRPQTTPPA PDTGGDGGGIVGWITDAINDAITAFFRTLVTAALNPLLELLGRTLLTTPEPSELPAIGELWSTSWAISVAAYGTLIMFGG ITVMALGTVQSRISIKEVAPRIPIGFLAAGLSQFLATKAIQIANVLPGAILSEGLNPDTAAGQLKTIILVAIVPTPGGFG KSIFVIFLGLFLAGSVVALLCTYIARVVIEVALIGAAPLALAGHGHPLTEKVAFWWWRAFFGCLGIQIAQSFVLIASFKV FFTPGGFTIFGPTPDGVVNLLAAITLIYFLFKIPFWLMPRIGHGGGGILGRVVRAYVIGRALGFLGGRFGRGGAGRAGSR AGRGRGGRGRGRGGRGRGRPGGGPGSGPSDPYHHVEADADGQLLLPLTRVPRVRRPGPARGAPRPPRPTGLAGRSRLRHR QLTIPFGQAVAPGGRYLPRDGGAWVDRDGQLLLPFEVDQPRSPTAAPAPARRPASARAGAGRSGPGRPAPSRPAPPKARQ PELPFDPYRGIRPDRTGQYALPLEGLQRTPRPTRPAPPVPRAASRPTSPARPVPPRYWQQLLPNMPRRPRPPRNGK
Sequences:
>Translated_716_residues MTAAASCRRVLPSGTAGSSPGQTRRRLGLSRRRDRGRCRGLLLAGTAAFTLLLVVVLPSVASAAPAPPVPAPAPSTDTPA PTGPTPNPQPGPSPVPPGQEAPATPAPSGGDATPAPDTPDTPPDDGGNDGPAEPCPADNPDCATTPEIPPPPRPQTTPPA PDTGGDGGGIVGWITDAINDAITAFFRTLVTAALNPLLELLGRTLLTTPEPSELPAIGELWSTSWAISVAAYGTLIMFGG ITVMALGTVQSRISIKEVAPRIPIGFLAAGLSQFLATKAIQIANVLPGAILSEGLNPDTAAGQLKTIILVAIVPTPGGFG KSIFVIFLGLFLAGSVVALLCTYIARVVIEVALIGAAPLALAGHGHPLTEKVAFWWWRAFFGCLGIQIAQSFVLIASFKV FFTPGGFTIFGPTPDGVVNLLAAITLIYFLFKIPFWLMPRIGHGGGGILGRVVRAYVIGRALGFLGGRFGRGGAGRAGSR AGRGRGGRGRGRGGRGRGRPGGGPGSGPSDPYHHVEADADGQLLLPLTRVPRVRRPGPARGAPRPPRPTGLAGRSRLRHR QLTIPFGQAVAPGGRYLPRDGGAWVDRDGQLLLPFEVDQPRSPTAAPAPARRPASARAGAGRSGPGRPAPSRPAPPKARQ PELPFDPYRGIRPDRTGQYALPLEGLQRTPRPTRPAPPVPRAASRPTSPARPVPPRYWQQLLPNMPRRPRPPRNGK >Mature_715_residues TAAASCRRVLPSGTAGSSPGQTRRRLGLSRRRDRGRCRGLLLAGTAAFTLLLVVVLPSVASAAPAPPVPAPAPSTDTPAP TGPTPNPQPGPSPVPPGQEAPATPAPSGGDATPAPDTPDTPPDDGGNDGPAEPCPADNPDCATTPEIPPPPRPQTTPPAP DTGGDGGGIVGWITDAINDAITAFFRTLVTAALNPLLELLGRTLLTTPEPSELPAIGELWSTSWAISVAAYGTLIMFGGI TVMALGTVQSRISIKEVAPRIPIGFLAAGLSQFLATKAIQIANVLPGAILSEGLNPDTAAGQLKTIILVAIVPTPGGFGK SIFVIFLGLFLAGSVVALLCTYIARVVIEVALIGAAPLALAGHGHPLTEKVAFWWWRAFFGCLGIQIAQSFVLIASFKVF FTPGGFTIFGPTPDGVVNLLAAITLIYFLFKIPFWLMPRIGHGGGGILGRVVRAYVIGRALGFLGGRFGRGGAGRAGSRA GRGRGGRGRGRGGRGRGRPGGGPGSGPSDPYHHVEADADGQLLLPLTRVPRVRRPGPARGAPRPPRPTGLAGRSRLRHRQ LTIPFGQAVAPGGRYLPRDGGAWVDRDGQLLLPFEVDQPRSPTAAPAPARRPASARAGAGRSGPGRPAPSRPAPPKARQP ELPFDPYRGIRPDRTGQYALPLEGLQRTPRPTRPAPPVPRAASRPTSPARPVPPRYWQQLLPNMPRRPRPPRNGK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 74417; Mature: 74286
Theoretical pI: Translated: 11.93; Mature: 11.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAAASCRRVLPSGTAGSSPGQTRRRLGLSRRRDRGRCRGLLLAGTAAFTLLLVVVLPSV CCCHHHHHHHCCCCCCCCCCCHHHHHHCHHHHHHHHHHCEEEEEHHHHHHHHHHHHHHHH ASAAPAPPVPAPAPSTDTPAPTGPTPNPQPGPSPVPPGQEAPATPAPSGGDATPAPDTPD HHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC TPPDDGGNDGPAEPCPADNPDCATTPEIPPPPRPQTTPPAPDTGGDGGGIVGWITDAIND CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH AITAFFRTLVTAALNPLLELLGRTLLTTPEPSELPAIGELWSTSWAISVAAYGTLIMFGG HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCHHHHHHHHHHHHHHHHC ITVMALGTVQSRISIKEVAPRIPIGFLAAGLSQFLATKAIQIANVLPGAILSEGLNPDTA HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCHH AGQLKTIILVAIVPTPGGFGKSIFVIFLGLFLAGSVVALLCTYIARVVIEVALIGAAPLA HHHEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH LAGHGHPLTEKVAFWWWRAFFGCLGIQIAQSFVLIASFKVFFTPGGFTIFGPTPDGVVNL CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCEEEECCCCHHHHHH LAAITLIYFLFKIPFWLMPRIGHGGGGILGRVVRAYVIGRALGFLGGRFGRGGAGRAGSR HHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC AGRGRGGRGRGRGGRGRGRPGGGPGSGPSDPYHHVEADADGQLLLPLTRVPRVRRPGPAR CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCEEEEHHHCCCCCCCCCCC GAPRPPRPTGLAGRSRLRHRQLTIPFGQAVAPGGRYLPRDGGAWVDRDGQLLLPFEVDQP CCCCCCCCCCCCHHHHHHHHEEECCCCCCCCCCCCCCCCCCCCEECCCCCEEEEEECCCC RSPTAAPAPARRPASARAGAGRSGPGRPAPSRPAPPKARQPELPFDPYRGIRPDRTGQYA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEE LPLEGLQRTPRPTRPAPPVPRAASRPTSPARPVPPRYWQQLLPNMPRRPRPPRNGK CCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure TAAASCRRVLPSGTAGSSPGQTRRRLGLSRRRDRGRCRGLLLAGTAAFTLLLVVVLPSV CCHHHHHHHCCCCCCCCCCCHHHHHHCHHHHHHHHHHCEEEEEHHHHHHHHHHHHHHHH ASAAPAPPVPAPAPSTDTPAPTGPTPNPQPGPSPVPPGQEAPATPAPSGGDATPAPDTPD HHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC TPPDDGGNDGPAEPCPADNPDCATTPEIPPPPRPQTTPPAPDTGGDGGGIVGWITDAIND CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH AITAFFRTLVTAALNPLLELLGRTLLTTPEPSELPAIGELWSTSWAISVAAYGTLIMFGG HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCHHHHHHHHHHHHHHHHC ITVMALGTVQSRISIKEVAPRIPIGFLAAGLSQFLATKAIQIANVLPGAILSEGLNPDTA HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCHH AGQLKTIILVAIVPTPGGFGKSIFVIFLGLFLAGSVVALLCTYIARVVIEVALIGAAPLA HHHEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH LAGHGHPLTEKVAFWWWRAFFGCLGIQIAQSFVLIASFKVFFTPGGFTIFGPTPDGVVNL CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCEEEECCCCHHHHHH LAAITLIYFLFKIPFWLMPRIGHGGGGILGRVVRAYVIGRALGFLGGRFGRGGAGRAGSR HHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC AGRGRGGRGRGRGGRGRGRPGGGPGSGPSDPYHHVEADADGQLLLPLTRVPRVRRPGPAR CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCEEEEHHHCCCCCCCCCCC GAPRPPRPTGLAGRSRLRHRQLTIPFGQAVAPGGRYLPRDGGAWVDRDGQLLLPFEVDQP CCCCCCCCCCCCHHHHHHHHEEECCCCCCCCCCCCCCCCCCCCEECCCCCEEEEEECCCC RSPTAAPAPARRPASARAGAGRSGPGRPAPSRPAPPKARQPELPFDPYRGIRPDRTGQYA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEE LPLEGLQRTPRPTRPAPPVPRAASRPTSPARPVPPRYWQQLLPNMPRRPRPPRNGK CCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA