Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

Click here to switch to the map view.

The map label for this gene is 158314565

Identifier: 158314565

GI number: 158314565

Start: 3242497

End: 3242886

Strand: Direct

Name: 158314565

Synonym: Franean1_2741

Alternate gene names: NA

Gene position: 3242497-3242886 (Clockwise)

Preceding gene: 158314564

Following gene: 158314566

Centisome position: 36.1

GC content: 70.0

Gene sequence:

>390_bases
ATGAGCCCGACCCCACCAGAGCACATCCGCGTCCCGCGTCCGGCCCGGCGGGTCGGATGGCGTCGGGCGGTCTTGCTCGT
CGCCGTCGTGGCGGTGTTCGTCCTGGCCGGCAGCGCGGCGGCCCTCGCTCAGGTGCCTGACCCCGGGGTGCCGGTGGCGA
AGGACCTCAATGCGGTCCTTAACAACATCCGCAACTGGATCATGGGGATTCTTGCGCTGCTGGCGACGGTGTTCCTCTCG
ATCGGCGGCGTGCGCTACCTGATCGCGAACGGCGAGCCAGGCGAGGTCGGCAAGGCCAAGGACGCATTCCGGAACGCCGG
CTGGGGTTACGGGCTGGCCGCGCTCGCGCCGGTCGTCGTCGGGATCCTCAAGCAGATCGTCGGGGGCTAG

Upstream 100 bases:

>100_bases
AACCTCGCACCCCACTCCCCGACCCACCGGCCAGCGGCGCGAGGTCCACCATGGCGCCCGACCCGGTAGGGGTGCCCTCG
GTGGTCGCGGGGGTGCTGGC

Downstream 100 bases:

>100_bases
GCCGTGACCGCTGCCGCCTCCTGCCGCCGCGTCCTGCCGTCCGGCACGGCGGGTTCGTCGCCTGGTCAGACGCGCCGCCG
GCTGGGTTTGTCTCGGCGCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 129; Mature: 128

Protein sequence:

>129_residues
MSPTPPEHIRVPRPARRVGWRRAVLLVAVVAVFVLAGSAAALAQVPDPGVPVAKDLNAVLNNIRNWIMGILALLATVFLS
IGGVRYLIANGEPGEVGKAKDAFRNAGWGYGLAALAPVVVGILKQIVGG

Sequences:

>Translated_129_residues
MSPTPPEHIRVPRPARRVGWRRAVLLVAVVAVFVLAGSAAALAQVPDPGVPVAKDLNAVLNNIRNWIMGILALLATVFLS
IGGVRYLIANGEPGEVGKAKDAFRNAGWGYGLAALAPVVVGILKQIVGG
>Mature_128_residues
SPTPPEHIRVPRPARRVGWRRAVLLVAVVAVFVLAGSAAALAQVPDPGVPVAKDLNAVLNNIRNWIMGILALLATVFLSI
GGVRYLIANGEPGEVGKAKDAFRNAGWGYGLAALAPVVVGILKQIVGG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13421; Mature: 13290

Theoretical pI: Translated: 11.48; Mature: 11.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSPTPPEHIRVPRPARRVGWRRAVLLVAVVAVFVLAGSAAALAQVPDPGVPVAKDLNAVL
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCHHHHHHHHH
NNIRNWIMGILALLATVFLSIGGVRYLIANGEPGEVGKAKDAFRNAGWGYGLAALAPVVV
HHHHHHHHHHHHHHHHHHHHHCCHHEEEECCCCCCCCHHHHHHHCCCCCCCHHHHHHHHH
GILKQIVGG
HHHHHHHCC
>Mature Secondary Structure 
SPTPPEHIRVPRPARRVGWRRAVLLVAVVAVFVLAGSAAALAQVPDPGVPVAKDLNAVL
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCHHHHHHHHH
NNIRNWIMGILALLATVFLSIGGVRYLIANGEPGEVGKAKDAFRNAGWGYGLAALAPVVV
HHHHHHHHHHHHHHHHHHHHHCCHHEEEECCCCCCCCHHHHHHHCCCCCCCHHHHHHHHH
GILKQIVGG
HHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA