| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158314567
Identifier: 158314567
GI number: 158314567
Start: 3245050
End: 3246375
Strand: Direct
Name: 158314567
Synonym: Franean1_2743
Alternate gene names: NA
Gene position: 3245050-3246375 (Clockwise)
Preceding gene: 158314566
Following gene: 158314568
Centisome position: 36.13
GC content: 75.26
Gene sequence:
>1326_bases ATGACACATCCGGTAAGGATTCCCGCTGATGTTGATCGTGAGGACAGGATCGTGGCGAATTTGACCGCCCGCCAGGTCCT GATCCTCACGCTCACCGGCACCGTGCTCTACCTGGGCTGGGCCGCGACCCGCGCCCTGCTGCCGCTGCCGCTGCCGGTGT TCGCCGTGCTGGCGGTGCCGGTCGCCGTGGGCGCCGGTGTCCTCGTCCTCGGCCAGCATGACGGGCTGTCCCTGGACCGG CTGCTGGTCGCCGCGATCCGCCAGCGCACCAGCCCGCGGCATCGGATCAACGCCCCCGAAGGGGTGATCGCGCCGCCGTC GTGGCTGGCCGCCCGCGCCACCAGCGGCCCCGATGAACGGAGACCGGCCGCCAGCGGTCAGAGCGCGGTGCCGCTACGGC TGCCGGCCCGCACCGTCACCGGCCAGGCCGGGGTCGGGGTGATCGACCTCGGCGGGGACGGCCTGGCGGTGGTCGCGGTC GCGAGCACGGTGAACTTCGCGTTGCGCACGCCGGGGGAGCAGGACGGGCTGGTCGCCGTGTTCGCCCGCTACCTGCACTC CCTCACCGCGCCGGTGCAGATCCTGGTGCGGGCGATGCCCGCGGACCTGTCCGGTCAGATCCACCTGCTCGACGACGCCG CCGAGCAGCTGCCCCACCCGGCGCTCGCGCACGCCGCCCGCGAACACGCCACCTACCTGGGCCAGCTCGCTGTCGAGATG CAGCTGCTGACCCGTCAGGTGCTGCTGGTGCTGCGTGAACCACTCGTCACCGCCGGCCCGGTCGATGGGCTCGGGGGCGC GTCCCCGCTGGCCGCGTGGACGGGCCGGCGGGCGGCGGTCCGCGACGCCCGCCGTGCCGGAGCCGCTGCCCGTCGTGCCG CGCACACCCGGCTCACCCGCCGCCTCGCCGAGGCCACCGACCTGCTCGCCCCCGCCGGGATCGTCATCACCCCCCTGGAC GCCGGCACGGCGACCAGCGTGCTGGCCGCCGCCTGCAACCCCGCCGGCCTGGTACCACCGGCCGCGCTCGCCGCGCCCGA CGAGGTCATCACCGCCGACTTTCCCGAGCCCACCGACAGCTACCCGGCCTATCCGCCGGACACCGACGACGGCGGCTTTC CGGACGACGCCGGGTTCGACGACCCGGGCGCGGCTGTCGGCCCCGGCTACGACGACCGGTTCGACGACGCGGACGGGGAC GGCCTGTCCGACGCCGACGACCCGGACTTCTGGGACCCACCCGTCCGCCGCCCGCCGGCCGGGCGATCCGAGGGCGGCTC CCGACGGCCAGCACGACACACGCGACGCAGGGGGCAGGCCCGATGA
Upstream 100 bases:
>100_bases CTCGCCGGCGCGGCCGGTCCCGCCGCGCTACTGGCAGCAGCTGTTGCCGAACATGCCCCGCCGCCCCCGCCCACCCCGCA ACGGAAAGTGATCAGCCCCG
Downstream 100 bases:
>100_bases GCAGACGATCCCGACGCCGCACCTCGGCGCAGGCCCCCGGCCCGTCGGCAGGGCCGCTGGACGCCGCAGCGGCGGCCTTT GTCCCGGACGCGCTGTCGAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 441; Mature: 440
Protein sequence:
>441_residues MTHPVRIPADVDREDRIVANLTARQVLILTLTGTVLYLGWAATRALLPLPLPVFAVLAVPVAVGAGVLVLGQHDGLSLDR LLVAAIRQRTSPRHRINAPEGVIAPPSWLAARATSGPDERRPAASGQSAVPLRLPARTVTGQAGVGVIDLGGDGLAVVAV ASTVNFALRTPGEQDGLVAVFARYLHSLTAPVQILVRAMPADLSGQIHLLDDAAEQLPHPALAHAAREHATYLGQLAVEM QLLTRQVLLVLREPLVTAGPVDGLGGASPLAAWTGRRAAVRDARRAGAAARRAAHTRLTRRLAEATDLLAPAGIVITPLD AGTATSVLAAACNPAGLVPPAALAAPDEVITADFPEPTDSYPAYPPDTDDGGFPDDAGFDDPGAAVGPGYDDRFDDADGD GLSDADDPDFWDPPVRRPPAGRSEGGSRRPARHTRRRGQAR
Sequences:
>Translated_441_residues MTHPVRIPADVDREDRIVANLTARQVLILTLTGTVLYLGWAATRALLPLPLPVFAVLAVPVAVGAGVLVLGQHDGLSLDR LLVAAIRQRTSPRHRINAPEGVIAPPSWLAARATSGPDERRPAASGQSAVPLRLPARTVTGQAGVGVIDLGGDGLAVVAV ASTVNFALRTPGEQDGLVAVFARYLHSLTAPVQILVRAMPADLSGQIHLLDDAAEQLPHPALAHAAREHATYLGQLAVEM QLLTRQVLLVLREPLVTAGPVDGLGGASPLAAWTGRRAAVRDARRAGAAARRAAHTRLTRRLAEATDLLAPAGIVITPLD AGTATSVLAAACNPAGLVPPAALAAPDEVITADFPEPTDSYPAYPPDTDDGGFPDDAGFDDPGAAVGPGYDDRFDDADGD GLSDADDPDFWDPPVRRPPAGRSEGGSRRPARHTRRRGQAR >Mature_440_residues THPVRIPADVDREDRIVANLTARQVLILTLTGTVLYLGWAATRALLPLPLPVFAVLAVPVAVGAGVLVLGQHDGLSLDRL LVAAIRQRTSPRHRINAPEGVIAPPSWLAARATSGPDERRPAASGQSAVPLRLPARTVTGQAGVGVIDLGGDGLAVVAVA STVNFALRTPGEQDGLVAVFARYLHSLTAPVQILVRAMPADLSGQIHLLDDAAEQLPHPALAHAAREHATYLGQLAVEMQ LLTRQVLLVLREPLVTAGPVDGLGGASPLAAWTGRRAAVRDARRAGAAARRAAHTRLTRRLAEATDLLAPAGIVITPLDA GTATSVLAAACNPAGLVPPAALAAPDEVITADFPEPTDSYPAYPPDTDDGGFPDDAGFDDPGAAVGPGYDDRFDDADGDG LSDADDPDFWDPPVRRPPAGRSEGGSRRPARHTRRRGQAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45973; Mature: 45841
Theoretical pI: Translated: 6.19; Mature: 6.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTHPVRIPADVDREDRIVANLTARQVLILTLTGTVLYLGWAATRALLPLPLPVFAVLAVP CCCCCCCCCCCCCCCCEEEECCCCEEEEEEEHHHHHHHHHHHHHHHCCCCHHHHHHHHHH VAVGAGVLVLGQHDGLSLDRLLVAAIRQRTSPRHRINAPEGVIAPPSWLAARATSGPDER HHHCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHCCCCCHHC RPAASGQSAVPLRLPARTVTGQAGVGVIDLGGDGLAVVAVASTVNFALRTPGEQDGLVAV CCCCCCCCCCEEECCCCEECCCCCCEEEEECCCCEEEEEEHHHHHHEEECCCCCCCHHHH FARYLHSLTAPVQILVRAMPADLSGQIHLLDDAAEQLPHPALAHAAREHATYLGQLAVEM HHHHHHHHHHHHHHHHHHCCCCCCCCEEEECHHHHHCCCHHHHHHHHHHHHHHHHHHHHH QLLTRQVLLVLREPLVTAGPVDGLGGASPLAAWTGRRAAVRDARRAGAAARRAAHTRLTR HHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH RLAEATDLLAPAGIVITPLDAGTATSVLAAACNPAGLVPPAALAAPDEVITADFPEPTDS HHHHHHHHHCCCCEEEEECCCCHHHHHHHHHCCCCCCCCCHHHCCCCCEEECCCCCCCCC YPAYPPDTDDGGFPDDAGFDDPGAAVGPGYDDRFDDADGDGLSDADDPDFWDPPVRRPPA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GRSEGGSRRPARHTRRRGQAR CCCCCCCCCCHHHHHHCCCCC >Mature Secondary Structure THPVRIPADVDREDRIVANLTARQVLILTLTGTVLYLGWAATRALLPLPLPVFAVLAVP CCCCCCCCCCCCCCCEEEECCCCEEEEEEEHHHHHHHHHHHHHHHCCCCHHHHHHHHHH VAVGAGVLVLGQHDGLSLDRLLVAAIRQRTSPRHRINAPEGVIAPPSWLAARATSGPDER HHHCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHCCCCCHHC RPAASGQSAVPLRLPARTVTGQAGVGVIDLGGDGLAVVAVASTVNFALRTPGEQDGLVAV CCCCCCCCCCEEECCCCEECCCCCCEEEEECCCCEEEEEEHHHHHHEEECCCCCCCHHHH FARYLHSLTAPVQILVRAMPADLSGQIHLLDDAAEQLPHPALAHAAREHATYLGQLAVEM HHHHHHHHHHHHHHHHHHCCCCCCCCEEEECHHHHHCCCHHHHHHHHHHHHHHHHHHHHH QLLTRQVLLVLREPLVTAGPVDGLGGASPLAAWTGRRAAVRDARRAGAAARRAAHTRLTR HHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH RLAEATDLLAPAGIVITPLDAGTATSVLAAACNPAGLVPPAALAAPDEVITADFPEPTDS HHHHHHHHHCCCCEEEEECCCCHHHHHHHHHCCCCCCCCCHHHCCCCCEEECCCCCCCCC YPAYPPDTDDGGFPDDAGFDDPGAAVGPGYDDRFDDADGDGLSDADDPDFWDPPVRRPPA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GRSEGGSRRPARHTRRRGQAR CCCCCCCCCCHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA