| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is cyp108 [H]
Identifier: 158314544
GI number: 158314544
Start: 3219820
End: 3221046
Strand: Direct
Name: cyp108 [H]
Synonym: Franean1_2720
Alternate gene names: 158314544
Gene position: 3219820-3221046 (Clockwise)
Preceding gene: 158314543
Following gene: 158314545
Centisome position: 35.85
GC content: 69.36
Gene sequence:
>1227_bases ATGGACATCGAGGCAGCGGCCACCGTCTTCACGGATCCGCGGGCGTACGCCGACAACGAGCGCTTCCACACCGCCACCGC GCTGCTGCGGCGCGAGTCACCCATCCACCGGATCGAGCATCCGAACTTCCACCCGTTCTGGGCCGTCACCAAGCACGAGG ACGTCATGGCGATCTCCCGCGCCTCCGACATCTGGATCAACGAGCCCCGGCCCGCGCTGGGCCCCAAGCCCAAGGACGCC GAGCGGGAGAACATCCCGATCCGATCGCTGGTCCAGATGGATGCCCCGGACCACCCGGTCTACCGCCACGTGAGCGCGGA CTGGTTCAAGCCGGCCGGTGTCCGGCGGCTGCGCGACCGCATCGCCGAGCTGGCGAAGCGCTTCGTGGACCGCATGGCCG ACCAGGGCGGCGAGTGCGACTTCTTCACCGACATCGTGTCGCACTACCCGCTGTACGTGATCCTTTCCCTGCTCGGCCTG CCCGAGGAGGACTTCCCCCGAATGCTCAGGCTGACCCAGGAGCTGTTCGGCGCGGACGACGAGGACCTGGCCAGGGACCA GGACAAGCAGGCGCAGAGGGCGCCCCTGGTGGACTTCTTCAACTACTTCCAGGCGCTGATCCAGGACCGCCGCGAGAACC CCACCGACGACCTGGGATCCGTGATCGCCAACGCCACGATCCAGGGCGAGCAGATCGGCAAGCTCGAGGCGGCCGGCTAC TACACGCTGATCGCGACGGCGGGGCACGACACCACCAGCGCGGCGCTCGCCGGCGGTCTGCACGCCCTGTTGGAGAGCCC GGGTCAGTGGCAGCGCCTGGTCGACGACCCGAGGATGGTGGCGACCGGCGTCGACGAGATGATCCGGTGGGTCTCCCCGG TCAAGCATTTCATGCGCACCGCCCGCGAGGACACGGTCGTGCGCGGCGTCGCGCTCGCGGCGGGGGAGTCGGTCCTGCTC TCCTATCCGTCGGCCAACCGGGACGAGGACGTCTTCGAGAACCCGGACACCTTCGACGTCGGGCGATCCCCGAACCGGCA TGTCGCCTTCGGGTTCGGCGCCCACTACTGCCTGGGCACCCACCTGGCCCGCCTCGAGGGCCAGGCGCTCTACGCGGAGC TGGTCCCCCGGGTGCGGTCGATCGAGCTGGCCGGAACGCCCGAGTACATGGAGGCCCTGTTCGTCGGGGGGCCGAAGCGG CTGCCGATCCGCTACACGATGGCCTGA
Upstream 100 bases:
>100_bases GGCGGCGGGGCCGGCCTCGGACCGGCGGGGCGGTCGGGCGTAGCCCGGCCGGGCGGGAGCGACGGCGTCCTGCCTGATCG ACGACTTCGGAGGGACCAGC
Downstream 100 bases:
>100_bases CGTGCGAGACTCCGCGCTTCTGGACGAGCTCGCGGTGCAGGCGACCCTCGCCCACTACTGCCACCGCTGCGATGACGGCG ACCTCGCCGGGGTGGTCGCG
Product: cytochrome P450
Products: NA
Alternate protein names: Cytochrome P450terp; Cytochrome P450 108 [H]
Number of amino acids: Translated: 408; Mature: 408
Protein sequence:
>408_residues MDIEAAATVFTDPRAYADNERFHTATALLRRESPIHRIEHPNFHPFWAVTKHEDVMAISRASDIWINEPRPALGPKPKDA ERENIPIRSLVQMDAPDHPVYRHVSADWFKPAGVRRLRDRIAELAKRFVDRMADQGGECDFFTDIVSHYPLYVILSLLGL PEEDFPRMLRLTQELFGADDEDLARDQDKQAQRAPLVDFFNYFQALIQDRRENPTDDLGSVIANATIQGEQIGKLEAAGY YTLIATAGHDTTSAALAGGLHALLESPGQWQRLVDDPRMVATGVDEMIRWVSPVKHFMRTAREDTVVRGVALAAGESVLL SYPSANRDEDVFENPDTFDVGRSPNRHVAFGFGAHYCLGTHLARLEGQALYAELVPRVRSIELAGTPEYMEALFVGGPKR LPIRYTMA
Sequences:
>Translated_408_residues MDIEAAATVFTDPRAYADNERFHTATALLRRESPIHRIEHPNFHPFWAVTKHEDVMAISRASDIWINEPRPALGPKPKDA ERENIPIRSLVQMDAPDHPVYRHVSADWFKPAGVRRLRDRIAELAKRFVDRMADQGGECDFFTDIVSHYPLYVILSLLGL PEEDFPRMLRLTQELFGADDEDLARDQDKQAQRAPLVDFFNYFQALIQDRRENPTDDLGSVIANATIQGEQIGKLEAAGY YTLIATAGHDTTSAALAGGLHALLESPGQWQRLVDDPRMVATGVDEMIRWVSPVKHFMRTAREDTVVRGVALAAGESVLL SYPSANRDEDVFENPDTFDVGRSPNRHVAFGFGAHYCLGTHLARLEGQALYAELVPRVRSIELAGTPEYMEALFVGGPKR LPIRYTMA >Mature_408_residues MDIEAAATVFTDPRAYADNERFHTATALLRRESPIHRIEHPNFHPFWAVTKHEDVMAISRASDIWINEPRPALGPKPKDA ERENIPIRSLVQMDAPDHPVYRHVSADWFKPAGVRRLRDRIAELAKRFVDRMADQGGECDFFTDIVSHYPLYVILSLLGL PEEDFPRMLRLTQELFGADDEDLARDQDKQAQRAPLVDFFNYFQALIQDRRENPTDDLGSVIANATIQGEQIGKLEAAGY YTLIATAGHDTTSAALAGGLHALLESPGQWQRLVDDPRMVATGVDEMIRWVSPVKHFMRTAREDTVVRGVALAAGESVLL SYPSANRDEDVFENPDTFDVGRSPNRHVAFGFGAHYCLGTHLARLEGQALYAELVPRVRSIELAGTPEYMEALFVGGPKR LPIRYTMA
Specific function: Catalyzes the hydroxylation of alpha-terpineol [H]
COG id: COG2124
COG function: function code Q; Cytochrome P450
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the cytochrome P450 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001128 - InterPro: IPR002397 - InterPro: IPR017972 [H]
Pfam domain/function: PF00067 p450 [H]
EC number: NA
Molecular weight: Translated: 45843; Mature: 45843
Theoretical pI: Translated: 5.31; Mature: 5.31
Prosite motif: PS00086 CYTOCHROME_P450
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDIEAAATVFTDPRAYADNERFHTATALLRRESPIHRIEHPNFHPFWAVTKHEDVMAISR CCCCCCHHEECCCCCCCCCCHHHHHHHHHHHCCCHHHCCCCCCCCEEEEECCCCHHEECC ASDIWINEPRPALGPKPKDAERENIPIRSLVQMDAPDHPVYRHVSADWFKPAGVRRLRDR CCCCEECCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCHHHCCCCCCCCHHHHHHHHHH IAELAKRFVDRMADQGGECDFFTDIVSHYPLYVILSLLGLPEEDFPRMLRLTQELFGADD HHHHHHHHHHHHHCCCCCCHHHHHHHHHCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCC EDLARDQDKQAQRAPLVDFFNYFQALIQDRRENPTDDLGSVIANATIQGEQIGKLEAAGY HHHHHCHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCEECCHHCCCEECCCE YTLIATAGHDTTSAALAGGLHALLESPGQWQRLVDDPRMVATGVDEMIRWVSPVKHFMRT EEEEEECCCCHHHHHHHHHHHHHHCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH AREDTVVRGVALAAGESVLLSYPSANRDEDVFENPDTFDVGRSPNRHVAFGFGAHYCLGT HHHHHHHHHHHHHCCCEEEEECCCCCCCCHHCCCCCCCCCCCCCCCEEEEECCHHHHHHH HLARLEGQALYAELVPRVRSIELAGTPEYMEALFVGGPKRLPIRYTMA HHHHHCCHHHHHHHHHHHHEEEECCCHHHHHHHHCCCCCCCCEEEECC >Mature Secondary Structure MDIEAAATVFTDPRAYADNERFHTATALLRRESPIHRIEHPNFHPFWAVTKHEDVMAISR CCCCCCHHEECCCCCCCCCCHHHHHHHHHHHCCCHHHCCCCCCCCEEEEECCCCHHEECC ASDIWINEPRPALGPKPKDAERENIPIRSLVQMDAPDHPVYRHVSADWFKPAGVRRLRDR CCCCEECCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCHHHCCCCCCCCHHHHHHHHHH IAELAKRFVDRMADQGGECDFFTDIVSHYPLYVILSLLGLPEEDFPRMLRLTQELFGADD HHHHHHHHHHHHHCCCCCCHHHHHHHHHCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCC EDLARDQDKQAQRAPLVDFFNYFQALIQDRRENPTDDLGSVIANATIQGEQIGKLEAAGY HHHHHCHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCEECCHHCCCEECCCE YTLIATAGHDTTSAALAGGLHALLESPGQWQRLVDDPRMVATGVDEMIRWVSPVKHFMRT EEEEEECCCCHHHHHHHHHHHHHHCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH AREDTVVRGVALAAGESVLLSYPSANRDEDVFENPDTFDVGRSPNRHVAFGFGAHYCLGT HHHHHHHHHHHHHCCCEEEEECCCCCCCCHHCCCCCCCCCCCCCCCEEEEECCHHHHHHH HLARLEGQALYAELVPRVRSIELAGTPEYMEALFVGGPKRLPIRYTMA HHHHHCCHHHHHHHHHHHHEEEECCCHHHHHHHHCCCCCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1629218; 8120894 [H]