| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158314545
Identifier: 158314545
GI number: 158314545
Start: 3221048
End: 3221452
Strand: Direct
Name: 158314545
Synonym: Franean1_2721
Alternate gene names: NA
Gene position: 3221048-3221452 (Clockwise)
Preceding gene: 158314544
Following gene: 158314546
Centisome position: 35.86
GC content: 69.63
Gene sequence:
>405_bases GTGCGAGACTCCGCGCTTCTGGACGAGCTCGCGGTGCAGGCGACCCTCGCCCACTACTGCCACCGCTGCGATGACGGCGA CCTCGCCGGGGTGGTCGCGCTGTTCACGCCGGACGGCGTCTTCAGCTTCGACGGCCGGACCGCCCGCGGTTCACAAGCGC TCCTCGAGTTCTTCCAGAGTTCGCAGGGACGACCGGACCAGCGTGGCAAGCACCTGACGGTCAACACGGTCGTGCGGCCG GACGGAGACGTGGCCCGGTCGGTCTCGGACTTCGTCTTCCTCCGGGCGGGGGCCGAGGGCCTGGTTCCGGCGATCGTCGG TCGGTACCACGACGAGCTGGTCAGGCTTGACGGTGAGTGGCGGATCGCCCGGCGTGAGGCACTGAGCATGGAGCAGCCCA GGTGA
Upstream 100 bases:
>100_bases CGGGTGCGGTCGATCGAGCTGGCCGGAACGCCCGAGTACATGGAGGCCCTGTTCGTCGGGGGGCCGAAGCGGCTGCCGAT CCGCTACACGATGGCCTGAC
Downstream 100 bases:
>100_bases CCGCCGCGGCGCACCACTTCGCCCGGCTGCTGGCGCTGGAGCTGGAGCCGGGCGGCGGCATACGCCGGACCCTCTGAATC ACACCCGTTCCCGGTTGTTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 134; Mature: 134
Protein sequence:
>134_residues MRDSALLDELAVQATLAHYCHRCDDGDLAGVVALFTPDGVFSFDGRTARGSQALLEFFQSSQGRPDQRGKHLTVNTVVRP DGDVARSVSDFVFLRAGAEGLVPAIVGRYHDELVRLDGEWRIARREALSMEQPR
Sequences:
>Translated_134_residues MRDSALLDELAVQATLAHYCHRCDDGDLAGVVALFTPDGVFSFDGRTARGSQALLEFFQSSQGRPDQRGKHLTVNTVVRP DGDVARSVSDFVFLRAGAEGLVPAIVGRYHDELVRLDGEWRIARREALSMEQPR >Mature_134_residues MRDSALLDELAVQATLAHYCHRCDDGDLAGVVALFTPDGVFSFDGRTARGSQALLEFFQSSQGRPDQRGKHLTVNTVVRP DGDVARSVSDFVFLRAGAEGLVPAIVGRYHDELVRLDGEWRIARREALSMEQPR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14799; Mature: 14799
Theoretical pI: Translated: 5.62; Mature: 5.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRDSALLDELAVQATLAHYCHRCDDGDLAGVVALFTPDGVFSFDGRTARGSQALLEFFQS CCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCEEECCCCCCCCHHHHHHHHHC SQGRPDQRGKHLTVNTVVRPDGDVARSVSDFVFLRAGAEGLVPAIVGRYHDELVRLDGEW CCCCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHEEECCCC RIARREALSMEQPR HHHHHHHCCCCCCC >Mature Secondary Structure MRDSALLDELAVQATLAHYCHRCDDGDLAGVVALFTPDGVFSFDGRTARGSQALLEFFQS CCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCEEECCCCCCCCHHHHHHHHHC SQGRPDQRGKHLTVNTVVRPDGDVARSVSDFVFLRAGAEGLVPAIVGRYHDELVRLDGEW CCCCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHEEECCCC RIARREALSMEQPR HHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA