Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

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The map label for this gene is yhbW [C]

Identifier: 158314537

GI number: 158314537

Start: 3209706

End: 3210785

Strand: Direct

Name: yhbW [C]

Synonym: Franean1_2713

Alternate gene names: 158314537

Gene position: 3209706-3210785 (Clockwise)

Preceding gene: 158314534

Following gene: 158314538

Centisome position: 35.73

GC content: 71.11

Gene sequence:

>1080_bases
GTGGGCCTGGCGGCCCGAAACTCGAAATTGACATCGAAGTTGCAAACGGGCTATGGTCCGCGCGTGTCAGTGTCGAATGT
TGCGCTCGGGCTCAGCCTTGCCGGAATCCGTGGGGACGCGGCGTCGCTCGCCGATGTCGCGCGGCGAGCCGAACGGTCGG
GATACGACTCCGTGTGGACGAGCGAGGCGTGGGGGAGCGACGCGTTCACGCCGCTGGCCTACATCGCCGCGCTCACCAGT
CGCCTCAGGCTCGGCACCGCCATCGCGCAGATGCCGGCGCGGACCCCGGCGACGACGGCGATGACGGTGCTGACGCTGCA
GCAGCTGTCCCAGGGGCGCGTCCTGCTCGGGCTCGGCGCGTCGGGGCCACAGGTCGTCGAGGGGTGGCACGGCGTGCCCT
ACCGCCCTCCGGTGCGGATGACGCGCGAGTACCTGGCCGTGTTGCGCAAGGCACTGGCCGCGACCGAGCGGCTCGAGTTC
TCCGGTGCGATCTTCACGGTTCCCTACACCGGCCCGGACTCCACCGGGCAGGGGCGTCCGTTGCGCTCCACCCTGCCGGG
GGCTGCGGACACTCCCATCCTCATCGCCGCCCTAGGGCCGAAGAACGTCGCCATGGCGGTGGAGGAGGCCGACGGCCTGC
TCCCGTACCTGTGGAGCCCGGCGCGCTGGAGCAAGGCCTGGGGGGAGACCCTCGAGAAGGCACCCGAGGGATTCCAGGTG
GCACCCACGGTCCTCGCCTGCGTCGGCGACGACCTCGACGCCTGCCGTAACCAGGTGCGCCCCCGTATCGCGCTGCACAT
CGGGGGCATGGGCTCCAGGTCGAAGAACTTCTACGCCTTGCTGGTCTCCCGCTACGGGTACGCCGACGAGGCCAGCCGCA
TCCAGGACCTCTACCTGGGTGGGGACCGCGCGGCGGCCTGCGCCGCCGTTCCCGACGAGCTCGTCGACGATCTGGCGCTC
GTGGGTCCGCCCGCCCGGATCGCCGACCAGCTCGCGGTGTGGCGGGACGGGCCGATCACCACCCTGATCGTGGAGCCGAC
GGACCTGGCCATGGTGGAGCCCATCGCCAGCCTGTGGTGA

Upstream 100 bases:

>100_bases
AGATTGACATTCGTGACGATAGCGGCCTCGGGTCACCGGGACAATCGGACCGTTTCCGCTGTGGGGAGTGCTGGTTTGAC
GGGGTGCGGCCGGCGCGGGG

Downstream 100 bases:

>100_bases
CGGTCGCCTCCGTACCCGATCTCCACGTCGACATGGGCACAGCAGCCGACCGGCGCCACGATGGTCACCTACACCGGCAA
GGTCCTCAACTACGTTCCCG

Product: luciferase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 359; Mature: 358

Protein sequence:

>359_residues
MGLAARNSKLTSKLQTGYGPRVSVSNVALGLSLAGIRGDAASLADVARRAERSGYDSVWTSEAWGSDAFTPLAYIAALTS
RLRLGTAIAQMPARTPATTAMTVLTLQQLSQGRVLLGLGASGPQVVEGWHGVPYRPPVRMTREYLAVLRKALAATERLEF
SGAIFTVPYTGPDSTGQGRPLRSTLPGAADTPILIAALGPKNVAMAVEEADGLLPYLWSPARWSKAWGETLEKAPEGFQV
APTVLACVGDDLDACRNQVRPRIALHIGGMGSRSKNFYALLVSRYGYADEASRIQDLYLGGDRAAACAAVPDELVDDLAL
VGPPARIADQLAVWRDGPITTLIVEPTDLAMVEPIASLW

Sequences:

>Translated_359_residues
MGLAARNSKLTSKLQTGYGPRVSVSNVALGLSLAGIRGDAASLADVARRAERSGYDSVWTSEAWGSDAFTPLAYIAALTS
RLRLGTAIAQMPARTPATTAMTVLTLQQLSQGRVLLGLGASGPQVVEGWHGVPYRPPVRMTREYLAVLRKALAATERLEF
SGAIFTVPYTGPDSTGQGRPLRSTLPGAADTPILIAALGPKNVAMAVEEADGLLPYLWSPARWSKAWGETLEKAPEGFQV
APTVLACVGDDLDACRNQVRPRIALHIGGMGSRSKNFYALLVSRYGYADEASRIQDLYLGGDRAAACAAVPDELVDDLAL
VGPPARIADQLAVWRDGPITTLIVEPTDLAMVEPIASLW
>Mature_358_residues
GLAARNSKLTSKLQTGYGPRVSVSNVALGLSLAGIRGDAASLADVARRAERSGYDSVWTSEAWGSDAFTPLAYIAALTSR
LRLGTAIAQMPARTPATTAMTVLTLQQLSQGRVLLGLGASGPQVVEGWHGVPYRPPVRMTREYLAVLRKALAATERLEFS
GAIFTVPYTGPDSTGQGRPLRSTLPGAADTPILIAALGPKNVAMAVEEADGLLPYLWSPARWSKAWGETLEKAPEGFQVA
PTVLACVGDDLDACRNQVRPRIALHIGGMGSRSKNFYALLVSRYGYADEASRIQDLYLGGDRAAACAAVPDELVDDLALV
GPPARIADQLAVWRDGPITTLIVEPTDLAMVEPIASLW

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019919
- InterPro:   IPR011251
- InterPro:   IPR016048 [H]

Pfam domain/function: PF00296 Bac_luciferase [H]

EC number: NA

Molecular weight: Translated: 38079; Mature: 37948

Theoretical pI: Translated: 7.34; Mature: 7.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGLAARNSKLTSKLQTGYGPRVSVSNVALGLSLAGIRGDAASLADVARRAERSGYDSVWT
CCCCCCCHHHHHHHHCCCCCCEEHHHEEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCC
SEAWGSDAFTPLAYIAALTSRLRLGTAIAQMPARTPATTAMTVLTLQQLSQGRVLLGLGA
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCEEEEECC
SGPQVVEGWHGVPYRPPVRMTREYLAVLRKALAATERLEFSGAIFTVPYTGPDSTGQGRP
CCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHEECCEEEEEECCCCCCCCCCCC
LRSTLPGAADTPILIAALGPKNVAMAVEEADGLLPYLWSPARWSKAWGETLEKAPEGFQV
CHHHCCCCCCCCEEEEEECCCCEEEEEHHCCCCCHHHCCCHHHHHHHHHHHHHCCCCCEE
APTVLACVGDDLDACRNQVRPRIALHIGGMGSRSKNFYALLVSRYGYADEASRIQDLYLG
HHHHHHHHCCCHHHHHHHCCCEEEEEECCCCCCCCCEEEEEEECCCCCHHHHHHHHHHCC
GDRAAACAAVPDELVDDLALVGPPARIADQLAVWRDGPITTLIVEPTDLAMVEPIASLW
CCCHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHCC
>Mature Secondary Structure 
GLAARNSKLTSKLQTGYGPRVSVSNVALGLSLAGIRGDAASLADVARRAERSGYDSVWT
CCCCCCHHHHHHHHCCCCCCEEHHHEEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCC
SEAWGSDAFTPLAYIAALTSRLRLGTAIAQMPARTPATTAMTVLTLQQLSQGRVLLGLGA
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCEEEEECC
SGPQVVEGWHGVPYRPPVRMTREYLAVLRKALAATERLEFSGAIFTVPYTGPDSTGQGRP
CCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHEECCEEEEEECCCCCCCCCCCC
LRSTLPGAADTPILIAALGPKNVAMAVEEADGLLPYLWSPARWSKAWGETLEKAPEGFQV
CHHHCCCCCCCCEEEEEECCCCEEEEEHHCCCCCHHHCCCHHHHHHHHHHHHHCCCCCEE
APTVLACVGDDLDACRNQVRPRIALHIGGMGSRSKNFYALLVSRYGYADEASRIQDLYLG
HHHHHHHHCCCHHHHHHHCCCEEEEEECCCCCCCCCEEEEEEECCCCCHHHHHHHHHHCC
GDRAAACAAVPDELVDDLALVGPPARIADQLAVWRDGPITTLIVEPTDLAMVEPIASLW
CCCHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]