| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158314441
Identifier: 158314441
GI number: 158314441
Start: 3094677
End: 3094910
Strand: Direct
Name: 158314441
Synonym: Franean1_2613
Alternate gene names: NA
Gene position: 3094677-3094910 (Clockwise)
Preceding gene: 158314439
Following gene: 158314466
Centisome position: 34.45
GC content: 64.53
Gene sequence:
>234_bases ATGGGCGCGACACGCCGCAGATTTACCGAGGAGTATAAGGAACTAGCGGTAACTTTCGTCATCGACGGCGGCCGTTCTGT CGCCGAGGTCGCCCGGAACATCGGCGTCCACGAGATGACGTTGGGAAAATGGATGAAGAAAGCCCAGGACGAGGCGGGGA ACTCGCAGCCGCCGGACACCGGCGCGGCTGCGCCCCATCCCAGACGCGTCCCCTGGCGTGCCGAGATCGCCTGA
Upstream 100 bases:
>100_bases TACCATCGGCAGTCAAGCCCACGACCTCTTTTGATCAGTGGAACGTACCCGCTTCGGTAGACACCCGGACTAGCTACCCG ATCCGTCGGGAGAGCAACAA
Downstream 100 bases:
>100_bases GCGCGCCGCCGGTAGGCGTCGTCATCGGAAGCTGGCCGCACACGGGTACGCGCATCGGGGTTGGGCCGTGACGCCCCGCA CGGAGCGTTTGACACATCCA
Product: transposase IS3/IS911 family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 77; Mature: 76
Protein sequence:
>77_residues MGATRRRFTEEYKELAVTFVIDGGRSVAEVARNIGVHEMTLGKWMKKAQDEAGNSQPPDTGAAAPHPRRVPWRAEIA
Sequences:
>Translated_77_residues MGATRRRFTEEYKELAVTFVIDGGRSVAEVARNIGVHEMTLGKWMKKAQDEAGNSQPPDTGAAAPHPRRVPWRAEIA >Mature_76_residues GATRRRFTEEYKELAVTFVIDGGRSVAEVARNIGVHEMTLGKWMKKAQDEAGNSQPPDTGAAAPHPRRVPWRAEIA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8519; Mature: 8388
Theoretical pI: Translated: 10.01; Mature: 10.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGATRRRFTEEYKELAVTFVIDGGRSVAEVARNIGVHEMTLGKWMKKAQDEAGNSQPPDT CCCHHHHHHHHHHHHEEEEEECCCCHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCC GAAAPHPRRVPWRAEIA CCCCCCCCCCCCCCCCC >Mature Secondary Structure GATRRRFTEEYKELAVTFVIDGGRSVAEVARNIGVHEMTLGKWMKKAQDEAGNSQPPDT CCHHHHHHHHHHHHEEEEEECCCCHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCC GAAAPHPRRVPWRAEIA CCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA