| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158314439
Identifier: 158314439
GI number: 158314439
Start: 3091493
End: 3093781
Strand: Direct
Name: 158314439
Synonym: Franean1_2611
Alternate gene names: NA
Gene position: 3091493-3093781 (Clockwise)
Preceding gene: 158314438
Following gene: 158314441
Centisome position: 34.42
GC content: 62.3
Gene sequence:
>2289_bases GTGAACACGGCTGGTCATCACGCTGTCGGCGAGGAAGCCGGTCTGCCTCTGCTGGAGGCGGCCCTGGCCGCACGTGCGGG GAAAGTCGCCGGCCTCGACGCTTTCATCCTCGGTAACTGGCTCACCGACCTGTCTCAGACGGTCGACCCGGTCGCCTACG CCGGCGTGAAAACCAAGATCCAGAATAAGGTTGACGAATACCTGAGGACGATCACGAGCAACGCATTGGTGCAACAGGCT GGTCGATTTGTGCCAGCGACCACGAAGGCAGAGGCAGCGAAGATAGTCGCCGAGGTCCGGAACCGCGTGTTCGCCGCACT CGACGTCCTGCTTGGCGCCGGGCCGACCGACAGCGGCGCGGCTGGCGCCGCCTTGCACGACGCCGTCGTCGTCCTCGGCT ATTTCAAGTTCGTCCATCCCGAGACCGACAGGGACGAACCGCGGATCCCGCTGGCGACGTACCTGACGATCGTCGAGGCT GGTTTCACGCAGTATTTCCCCCACGAGCATATGGACCGGCCGTCGGTCCGTCCCGGCGACCCCCCGGTATACGCCAGCGA CCTCGACCGGGGCCCTAGGTCCGAGCCCGACAAGGTCCGAGGGCCGGACCTCTACCGTTACCTTCGTGACGACATCGAAA TCCTGGCTGGTGGACTGGCGGAACTGGATCTTGATTGGGCTCGTGCCATCGCTCGCGGCGAGATCCCGACTGACGGGAGC GACCTGCGGTTTCCGGCGGGCCTGGCACGGCTGGGCCATCTGCTGCACGCGGTGGAGGATTTTTTCGCCCACTCCAACTT CATCGAGTTGTTCGTTAGCTCGCAGGGCGGAACTTATCTTCCGAAGCTCTTCGAGGGACGCGACGTCGAGATCTTCGCCC GACGGCTCAAGCGATGGTCACCAGGCGCCACGGCGACGGATTGGCGCACGCTGCCGACCGAGAACTTCGTGGTGACCGGC TACTTCGGCACATGGGACACCATGGTCTCGCTCGTCCACGCTGCGGAGGAGCTGCTGGGAATCGGATGGCAGGATCCGGC AAGGCGGGTCGGAGACGTGTTCAGATCCGTCGAGATGTTCGAGCGCTCCAAGATCGAAAAAGAATACTACGAGTGGATTG AGTCCGTGTCCGAGCTGCTCGACGACCCAGCGGCCGCGTTCGAGAATTCGAACAACCGAATAGCCCAGAAGGTCGCCGAG AATTGGGGCGACAAGGTAAAAACGATCAAGAATCCTGAAGTGCGCGCGACTGTGCTGCGACAGGTAATGGCCTCCACGAA GTTCCTGAAGACGGTCGACCCGAGCATCACCGCCCGAATCTACAACTTGGTAATCGCAGTGACCAAGGGGTTTGCGATCA ACTCGCTGGTCATGTCCATCCGAAAATCGGTCGACACACTGAGGAAGCTTTTTACAGTACCACTCGAACTTATCCGCGAT ACGGCTGTCGCATCCGCCGGGGAGTTCGCCACGGAATCGGTCCTGTACCTTGCTAAGGATCTACTGCTCTACAACTGGAT TCTGAGAGGGTCCGACCGTAACGTCGGATCTCACTCGCTGCTCGCCAAAGACACGGGATCGGAGTGGTTGTACCAGTACC AACGGGCCTGTGCGACCGCAGCACACTATATCGTCCTGAAAAATATGATGCGGCACTTCGACCCAACGACGGCGCCGCCC ACGAACACCGTCGTCGACTGGCTCGCATTGCTTGAGTCGCTCCTTACGAATCCGGTGGGTACAACCTCTCAAAGACTCGA ACTGAAAGTGACCGTACCGTCCGAAGTGTCGCTTCCGCCACAGACGCGGAAAGTGGTGGACTCGATCGAGCGCACGGCTA AGGCGGCCGGCGTCGGCGAGCGAGACGGGTTGCCGGCATGGCGCCAGGTCGCCGGGGCGACGTTCGGACTCGATAGTGAG ACCGAGATGGAAGCCGAACAGATCTGCCGGGTGATCGCCCGAAATACACAGACCGAATGGCGACCGCGGTCCCAGCCGGC GACTGTTGAGGTTCTGTTGCCCGGACTGTCCGTCGTCGTCGGCTCCTTCGTCGGGAGAGGTAACCCCGAAACCCCGTGGC CGTCAGCGGTCCTGGAACGAGAACGGTCCTACCCTGGGAAAGGATGGGAGGTCGTCCGCGGCTACCTCGACTTCGCCGCC GACCAGTCGGTCGAGGCGGTCGTCCCGCCGACGCGGTTCGTGGACGAGCGAGTCGCGCGGCAGCGCATCCAGCTGTCGGC GGACAGGCGCCGCGGCGCGGAACTGCGCTACAATTCGTTCGCGAAGTAG
Upstream 100 bases:
>100_bases CACTGGTCGGCCAGTGGTTCGAGTACACCCCGACGAGTGCGCTCGATATTGGCATCGACGTCGATGAACACCTGTCCAGC AGTCGGGCGGTGCCAAGCCA
Downstream 100 bases:
>100_bases AACCGTTGCACGCGAGTCTTCACGGCACGTCGGCGCTGGATGGCCGACGGTTCGGATTTGGCGAGGGCTTCCAGGCCGAT GTAGGGGTGGGACTCAATCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 762; Mature: 762
Protein sequence:
>762_residues MNTAGHHAVGEEAGLPLLEAALAARAGKVAGLDAFILGNWLTDLSQTVDPVAYAGVKTKIQNKVDEYLRTITSNALVQQA GRFVPATTKAEAAKIVAEVRNRVFAALDVLLGAGPTDSGAAGAALHDAVVVLGYFKFVHPETDRDEPRIPLATYLTIVEA GFTQYFPHEHMDRPSVRPGDPPVYASDLDRGPRSEPDKVRGPDLYRYLRDDIEILAGGLAELDLDWARAIARGEIPTDGS DLRFPAGLARLGHLLHAVEDFFAHSNFIELFVSSQGGTYLPKLFEGRDVEIFARRLKRWSPGATATDWRTLPTENFVVTG YFGTWDTMVSLVHAAEELLGIGWQDPARRVGDVFRSVEMFERSKIEKEYYEWIESVSELLDDPAAAFENSNNRIAQKVAE NWGDKVKTIKNPEVRATVLRQVMASTKFLKTVDPSITARIYNLVIAVTKGFAINSLVMSIRKSVDTLRKLFTVPLELIRD TAVASAGEFATESVLYLAKDLLLYNWILRGSDRNVGSHSLLAKDTGSEWLYQYQRACATAAHYIVLKNMMRHFDPTTAPP TNTVVDWLALLESLLTNPVGTTSQRLELKVTVPSEVSLPPQTRKVVDSIERTAKAAGVGERDGLPAWRQVAGATFGLDSE TEMEAEQICRVIARNTQTEWRPRSQPATVEVLLPGLSVVVGSFVGRGNPETPWPSAVLERERSYPGKGWEVVRGYLDFAA DQSVEAVVPPTRFVDERVARQRIQLSADRRRGAELRYNSFAK
Sequences:
>Translated_762_residues MNTAGHHAVGEEAGLPLLEAALAARAGKVAGLDAFILGNWLTDLSQTVDPVAYAGVKTKIQNKVDEYLRTITSNALVQQA GRFVPATTKAEAAKIVAEVRNRVFAALDVLLGAGPTDSGAAGAALHDAVVVLGYFKFVHPETDRDEPRIPLATYLTIVEA GFTQYFPHEHMDRPSVRPGDPPVYASDLDRGPRSEPDKVRGPDLYRYLRDDIEILAGGLAELDLDWARAIARGEIPTDGS DLRFPAGLARLGHLLHAVEDFFAHSNFIELFVSSQGGTYLPKLFEGRDVEIFARRLKRWSPGATATDWRTLPTENFVVTG YFGTWDTMVSLVHAAEELLGIGWQDPARRVGDVFRSVEMFERSKIEKEYYEWIESVSELLDDPAAAFENSNNRIAQKVAE NWGDKVKTIKNPEVRATVLRQVMASTKFLKTVDPSITARIYNLVIAVTKGFAINSLVMSIRKSVDTLRKLFTVPLELIRD TAVASAGEFATESVLYLAKDLLLYNWILRGSDRNVGSHSLLAKDTGSEWLYQYQRACATAAHYIVLKNMMRHFDPTTAPP TNTVVDWLALLESLLTNPVGTTSQRLELKVTVPSEVSLPPQTRKVVDSIERTAKAAGVGERDGLPAWRQVAGATFGLDSE TEMEAEQICRVIARNTQTEWRPRSQPATVEVLLPGLSVVVGSFVGRGNPETPWPSAVLERERSYPGKGWEVVRGYLDFAA DQSVEAVVPPTRFVDERVARQRIQLSADRRRGAELRYNSFAK >Mature_762_residues MNTAGHHAVGEEAGLPLLEAALAARAGKVAGLDAFILGNWLTDLSQTVDPVAYAGVKTKIQNKVDEYLRTITSNALVQQA GRFVPATTKAEAAKIVAEVRNRVFAALDVLLGAGPTDSGAAGAALHDAVVVLGYFKFVHPETDRDEPRIPLATYLTIVEA GFTQYFPHEHMDRPSVRPGDPPVYASDLDRGPRSEPDKVRGPDLYRYLRDDIEILAGGLAELDLDWARAIARGEIPTDGS DLRFPAGLARLGHLLHAVEDFFAHSNFIELFVSSQGGTYLPKLFEGRDVEIFARRLKRWSPGATATDWRTLPTENFVVTG YFGTWDTMVSLVHAAEELLGIGWQDPARRVGDVFRSVEMFERSKIEKEYYEWIESVSELLDDPAAAFENSNNRIAQKVAE NWGDKVKTIKNPEVRATVLRQVMASTKFLKTVDPSITARIYNLVIAVTKGFAINSLVMSIRKSVDTLRKLFTVPLELIRD TAVASAGEFATESVLYLAKDLLLYNWILRGSDRNVGSHSLLAKDTGSEWLYQYQRACATAAHYIVLKNMMRHFDPTTAPP TNTVVDWLALLESLLTNPVGTTSQRLELKVTVPSEVSLPPQTRKVVDSIERTAKAAGVGERDGLPAWRQVAGATFGLDSE TEMEAEQICRVIARNTQTEWRPRSQPATVEVLLPGLSVVVGSFVGRGNPETPWPSAVLERERSYPGKGWEVVRGYLDFAA DQSVEAVVPPTRFVDERVARQRIQLSADRRRGAELRYNSFAK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 84227; Mature: 84227
Theoretical pI: Translated: 6.11; Mature: 6.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTAGHHAVGEEAGLPLLEAALAARAGKVAGLDAFILGNWLTDLSQTVDPVAYAGVKTKI CCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH QNKVDEYLRTITSNALVQQAGRFVPATTKAEAAKIVAEVRNRVFAALDVLLGAGPTDSGA HHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC AGAALHDAVVVLGYFKFVHPETDRDEPRIPLATYLTIVEAGFTQYFPHEHMDRPSVRPGD CHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCC PPVYASDLDRGPRSEPDKVRGPDLYRYLRDDIEILAGGLAELDLDWARAIARGEIPTDGS CCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCC DLRFPAGLARLGHLLHAVEDFFAHSNFIELFVSSQGGTYLPKLFEGRDVEIFARRLKRWS CCCCCHHHHHHHHHHHHHHHHHHCCCHHEEEEECCCCCCCHHHHCCCCHHHHHHHHHHCC PGATATDWRTLPTENFVVTGYFGTWDTMVSLVHAAEELLGIGWQDPARRVGDVFRSVEMF CCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH ERSKIEKEYYEWIESVSELLDDPAAAFENSNNRIAQKVAENWGDKVKTIKNPEVRATVLR HHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCHHHHHHHHHHHCHHHHHCCCCHHHHHHHH QVMASTKFLKTVDPSITARIYNLVIAVTKGFAINSLVMSIRKSVDTLRKLFTVPLELIRD HHHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TAVASAGEFATESVLYLAKDLLLYNWILRGSDRNVGSHSLLAKDTGSEWLYQYQRACATA HHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEECCCCHHHHHHHHHHHHHH AHYIVLKNMMRHFDPTTAPPTNTVVDWLALLESLLTNPVGTTSQRLELKVTVPSEVSLPP HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCC QTRKVVDSIERTAKAAGVGERDGLPAWRQVAGATFGLDSETEMEAEQICRVIARNTQTEW HHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCC RPRSQPATVEVLLPGLSVVVGSFVGRGNPETPWPSAVLERERSYPGKGWEVVRGYLDFAA CCCCCCCEEEEEHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHC DQSVEAVVPPTRFVDERVARQRIQLSADRRRGAELRYNSFAK CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure MNTAGHHAVGEEAGLPLLEAALAARAGKVAGLDAFILGNWLTDLSQTVDPVAYAGVKTKI CCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH QNKVDEYLRTITSNALVQQAGRFVPATTKAEAAKIVAEVRNRVFAALDVLLGAGPTDSGA HHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC AGAALHDAVVVLGYFKFVHPETDRDEPRIPLATYLTIVEAGFTQYFPHEHMDRPSVRPGD CHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCC PPVYASDLDRGPRSEPDKVRGPDLYRYLRDDIEILAGGLAELDLDWARAIARGEIPTDGS CCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCC DLRFPAGLARLGHLLHAVEDFFAHSNFIELFVSSQGGTYLPKLFEGRDVEIFARRLKRWS CCCCCHHHHHHHHHHHHHHHHHHCCCHHEEEEECCCCCCCHHHHCCCCHHHHHHHHHHCC PGATATDWRTLPTENFVVTGYFGTWDTMVSLVHAAEELLGIGWQDPARRVGDVFRSVEMF CCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH ERSKIEKEYYEWIESVSELLDDPAAAFENSNNRIAQKVAENWGDKVKTIKNPEVRATVLR HHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCHHHHHHHHHHHCHHHHHCCCCHHHHHHHH QVMASTKFLKTVDPSITARIYNLVIAVTKGFAINSLVMSIRKSVDTLRKLFTVPLELIRD HHHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TAVASAGEFATESVLYLAKDLLLYNWILRGSDRNVGSHSLLAKDTGSEWLYQYQRACATA HHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEECCCCHHHHHHHHHHHHHH AHYIVLKNMMRHFDPTTAPPTNTVVDWLALLESLLTNPVGTTSQRLELKVTVPSEVSLPP HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCC QTRKVVDSIERTAKAAGVGERDGLPAWRQVAGATFGLDSETEMEAEQICRVIARNTQTEW HHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCC RPRSQPATVEVLLPGLSVVVGSFVGRGNPETPWPSAVLERERSYPGKGWEVVRGYLDFAA CCCCCCCEEEEEHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHC DQSVEAVVPPTRFVDERVARQRIQLSADRRRGAELRYNSFAK CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA