Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

Click here to switch to the map view.

The map label for this gene is 158314258

Identifier: 158314258

GI number: 158314258

Start: 2890642

End: 2891724

Strand: Direct

Name: 158314258

Synonym: Franean1_2428

Alternate gene names: NA

Gene position: 2890642-2891724 (Clockwise)

Preceding gene: 158314256

Following gene: 158314260

Centisome position: 32.18

GC content: 75.72

Gene sequence:

>1083_bases
GTGGTGGGTGACCGGCCGCGGCGAACTGGATCACCGCTGGCGGAATCCTGGTCGCCGGCCGCGGTAATCCGGATGGCCGT
TCGGTTGGACAGCGGCCGGCGGTTACGTGAGGCTTCTATCTGTGTCCATACAGTCACGATCGTGGGTGGTTGCCGGCGCT
CGTCCGCATCGGAGCCGGCCGTGATCCGCCCCGGGACGCAGCGCCGGGCGGAGCGGCCGCCGGCCGCCGGGCGGGCCCGT
GAGCTGGCCGGACGGGTTCCTGCGGCCAGGGCGCTCGTCGACCGCCTCGACCGTGCGGGAGCCGGTCCGGTGGACGCGCT
CGCGCGGGCCGCGCAGGTCGCGGACGCCCGGGTGCTGGCGAGCATCGACCGGGTCGGGCCCATCGCGACAGACGCCGAGG
CGGCGAGCACCACGACCGCCTCCTACCTGACCCTGCTCGACCTCGCCGACCGCGCCGGGATCGCCGACGATCTCGACATC
AGTCTGCGGCTCGCTGCGGTCGGCCAGGCCGTGCCCCGCGACGGTGCCAAGATCGCCCACGGGAACGCCGCCGAGATCTG
CGCCCGCGCCCGCGAGGTCGGCGCCACAGTCACTCTGGACATCTTCCCCCTGGACGCCGCCGAACCGGCCGCCGTCGACG
CGATGCTGGTGACCCTGTCGGAGCTGCGCCGGGACGTCCCGGCGACCGGTGCCGTGCTGCGGACAGGCCTGGCCCGCACC
GTGGCGGACTGCCGGGACCTCGCCCGTCCGGGCTGTCGGGTCCGGCTGTGTCCGGGGCCCGCGCGGGCCAGGCAGTCGGC
GCCCGGCGCGCGCCGGGCGCCGACTGCCTGGCGCGGTGCGTTCGCCAGCTCCCTGGGTGTCCTCATGGCCGGACCGGGCT
ATCCCGTGGTCGCCACGGACGATCCGGGGCTGATCGCGCTCACCGCCCGGCTGGCCATGCATGTCGGTCGCCGCCGCGAC
AGCTTCGAGTTCCAGGCCCTGACGGGCACGCTCGGCCGCGAGCACCGGCGGCTGGTCGCCGAGGGCTACCGGACCAGGGC
GTACGTCGGGTACGGCCTGCTCCGGCCGGCTCGCGCGCGGTAG

Upstream 100 bases:

>100_bases
TCGCCGGCATACCGGTGCATGGGTCCGAGGAGGAGGCTGGTCATGAGTCCTACTCTCTCCGTGCCCCGTGGGAGGCGCCC
AACGGGGGTGGCCCGCCGCG

Downstream 100 bases:

>100_bases
GTCCGCGGGCGGGCCGGCCGGAGCAGGCGACGGACACGGAGCCGGCGGGCACGGGACAGGGCAGGGCCGTTCGGCTCGTG
CCGTCACCGGCGCTCCGTCA

Product: proline dehydrogenase

Products: NA

Alternate protein names: L-Proline Dehydrogenase; Proline Dehydrogenase PutA

Number of amino acids: Translated: 360; Mature: 360

Protein sequence:

>360_residues
MVGDRPRRTGSPLAESWSPAAVIRMAVRLDSGRRLREASICVHTVTIVGGCRRSSASEPAVIRPGTQRRAERPPAAGRAR
ELAGRVPAARALVDRLDRAGAGPVDALARAAQVADARVLASIDRVGPIATDAEAASTTTASYLTLLDLADRAGIADDLDI
SLRLAAVGQAVPRDGAKIAHGNAAEICARAREVGATVTLDIFPLDAAEPAAVDAMLVTLSELRRDVPATGAVLRTGLART
VADCRDLARPGCRVRLCPGPARARQSAPGARRAPTAWRGAFASSLGVLMAGPGYPVVATDDPGLIALTARLAMHVGRRRD
SFEFQALTGTLGREHRRLVAEGYRTRAYVGYGLLRPARAR

Sequences:

>Translated_360_residues
MVGDRPRRTGSPLAESWSPAAVIRMAVRLDSGRRLREASICVHTVTIVGGCRRSSASEPAVIRPGTQRRAERPPAAGRAR
ELAGRVPAARALVDRLDRAGAGPVDALARAAQVADARVLASIDRVGPIATDAEAASTTTASYLTLLDLADRAGIADDLDI
SLRLAAVGQAVPRDGAKIAHGNAAEICARAREVGATVTLDIFPLDAAEPAAVDAMLVTLSELRRDVPATGAVLRTGLART
VADCRDLARPGCRVRLCPGPARARQSAPGARRAPTAWRGAFASSLGVLMAGPGYPVVATDDPGLIALTARLAMHVGRRRD
SFEFQALTGTLGREHRRLVAEGYRTRAYVGYGLLRPARAR
>Mature_360_residues
MVGDRPRRTGSPLAESWSPAAVIRMAVRLDSGRRLREASICVHTVTIVGGCRRSSASEPAVIRPGTQRRAERPPAAGRAR
ELAGRVPAARALVDRLDRAGAGPVDALARAAQVADARVLASIDRVGPIATDAEAASTTTASYLTLLDLADRAGIADDLDI
SLRLAAVGQAVPRDGAKIAHGNAAEICARAREVGATVTLDIFPLDAAEPAAVDAMLVTLSELRRDVPATGAVLRTGLART
VADCRDLARPGCRVRLCPGPARARQSAPGARRAPTAWRGAFASSLGVLMAGPGYPVVATDDPGLIALTARLAMHVGRRRD
SFEFQALTGTLGREHRRLVAEGYRTRAYVGYGLLRPARAR

Specific function: Unknown

COG id: COG0506

COG function: function code E; Proline dehydrogenase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37824; Mature: 37824

Theoretical pI: Translated: 11.55; Mature: 11.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVGDRPRRTGSPLAESWSPAAVIRMAVRLDSGRRLREASICVHTVTIVGGCRRSSASEPA
CCCCCCCCCCCCHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCC
VIRPGTQRRAERPPAAGRARELAGRVPAARALVDRLDRAGAGPVDALARAAQVADARVLA
EECCCHHHHCCCCCCCCHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
SIDRVGPIATDAEAASTTTASYLTLLDLADRAGIADDLDISLRLAAVGQAVPRDGAKIAH
HHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEHHCCCCCCCCCEECC
GNAAEICARAREVGATVTLDIFPLDAAEPAAVDAMLVTLSELRRDVPATGAVLRTGLART
CCHHHHHHHHHHCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
VADCRDLARPGCRVRLCPGPARARQSAPGARRAPTAWRGAFASSLGVLMAGPGYPVVATD
HHHHHHHCCCCCEEEECCCHHHHHCCCCCCCCCCHHHHHHHHHHCCEEEECCCCCEEECC
DPGLIALTARLAMHVGRRRDSFEFQALTGTLGREHRRLVAEGYRTRAYVGYGLLRPARAR
CCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHEEECHHHCCCCCCC
>Mature Secondary Structure
MVGDRPRRTGSPLAESWSPAAVIRMAVRLDSGRRLREASICVHTVTIVGGCRRSSASEPA
CCCCCCCCCCCCHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCC
VIRPGTQRRAERPPAAGRARELAGRVPAARALVDRLDRAGAGPVDALARAAQVADARVLA
EECCCHHHHCCCCCCCCHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
SIDRVGPIATDAEAASTTTASYLTLLDLADRAGIADDLDISLRLAAVGQAVPRDGAKIAH
HHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEHHCCCCCCCCCEECC
GNAAEICARAREVGATVTLDIFPLDAAEPAAVDAMLVTLSELRRDVPATGAVLRTGLART
CCHHHHHHHHHHCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
VADCRDLARPGCRVRLCPGPARARQSAPGARRAPTAWRGAFASSLGVLMAGPGYPVVATD
HHHHHHHCCCCCEEEECCCHHHHHCCCCCCCCCCHHHHHHHHHHCCEEEECCCCCEEECC
DPGLIALTARLAMHVGRRRDSFEFQALTGTLGREHRRLVAEGYRTRAYVGYGLLRPARAR
CCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHEEECHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA