Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

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The map label for this gene is brpA [H]

Identifier: 158314218

GI number: 158314218

Start: 2843681

End: 2844679

Strand: Direct

Name: brpA [H]

Synonym: Franean1_2388

Alternate gene names: 158314218

Gene position: 2843681-2844679 (Clockwise)

Preceding gene: 158314217

Following gene: 158314219

Centisome position: 31.66

GC content: 71.67

Gene sequence:

>999_bases
TTGCTGGAGCTTCTTGGTCTCGACGACGTCACGCTGTCGGCCTACCGGTTGTGGCTGAGACATCCCGACATGGATGTCGA
CGGGGTGGCCACGGCGGTGGGGCAGGCGAACGACACAGTCCGCCGGTCACGGGACCGGCTCGTCGAGCTGTCACTGCTGT
TGCCCTCCACCGAACACCCCGGCCACCTGGTCGCCGTCCACCCGGAGGCCGGTCTGGAGCATCTGCTCCAGGCTCAGCAC
GAGGCACTCATCCGCCGCCACGAGCGGCTTGTCCGGGCACGGGCGCAGGTGAGCACGTTCGTCTCGGAGTACCTGGACAA
CCGGCCCGGTGGGGACGGCGCGGAGGTCGAGCACATCGACAGCGCCGACCAGGCCCGGGCCGAACTGCTCACCCTTGTCG
GCCGGGCCGAGAAGGAGGTGCTCGCGCTGCACACCCGGCGCGGCCGCCCGCCGGCGTTGACCGCGGAGGTTCTCCCGGTC
GAGCTGCGGGCGCTGCAGCGCGGTGTGGCGATGCGCAGCGTCCTCCCACGCACGGTCAGCACCGACGAGACGGGTGTCGG
CTACGTCCGCACGGTCGCCTCGCACGGCCTGGAGGCCCGGCTCGCCGACGACCCGCGCATCGACGCGACGACCGTGGACG
GCCGGGTCGGGCTGGTGCAGTTCGTGCAGCACGGCACCGACCCGCACGCGCTGATCGTGCGCTCGCCCGCGCTGGCGAAC
CTGGTCACCATGCTGTTCGAGCAGGTCTGGGACAGCGCCGAGCCGCTGGCCGCGGAGGCCGACGGCGACCTGGAGAGCCC
TGCGGACGACCGGCCGAACGACACCGAGCGGCTGCTTTTAAGGCTGCTCAGCCTGGGTGTGAAGGACGAGGCAGCGGCCC
GCCATCTCGGGGTGTCCGTCCGTACGGTGCGTCGGATGGTCGCCGACCTCATGACCCGCCTGGACGCCCGTAGCCGCTTT
CAGGCCGGGACGGTCGCGGCCCGGCGGGGTTGGTTGTAG

Upstream 100 bases:

>100_bases
AGAGCCAGCGACCGGGACTGCCGACCGGCTCACGGTGAACGACACCGCGCGTGCCGCCCCAGCGCCCGCGGACCATCCGC
TTCGACCTGGGAAGGGGATC

Downstream 100 bases:

>100_bases
CCGCGTTGTGATCAGTTGGTCGGATCGTTGGCAGTAGATGGTCAGGGCAACTTCCTGCCACCCGGAATGCCGGACAGAAG
TTCCGATGGGCCGCATGATT

Product: LuxR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 332; Mature: 332

Protein sequence:

>332_residues
MLELLGLDDVTLSAYRLWLRHPDMDVDGVATAVGQANDTVRRSRDRLVELSLLLPSTEHPGHLVAVHPEAGLEHLLQAQH
EALIRRHERLVRARAQVSTFVSEYLDNRPGGDGAEVEHIDSADQARAELLTLVGRAEKEVLALHTRRGRPPALTAEVLPV
ELRALQRGVAMRSVLPRTVSTDETGVGYVRTVASHGLEARLADDPRIDATTVDGRVGLVQFVQHGTDPHALIVRSPALAN
LVTMLFEQVWDSAEPLAAEADGDLESPADDRPNDTERLLLRLLSLGVKDEAAARHLGVSVRTVRRMVADLMTRLDARSRF
QAGTVAARRGWL

Sequences:

>Translated_332_residues
MLELLGLDDVTLSAYRLWLRHPDMDVDGVATAVGQANDTVRRSRDRLVELSLLLPSTEHPGHLVAVHPEAGLEHLLQAQH
EALIRRHERLVRARAQVSTFVSEYLDNRPGGDGAEVEHIDSADQARAELLTLVGRAEKEVLALHTRRGRPPALTAEVLPV
ELRALQRGVAMRSVLPRTVSTDETGVGYVRTVASHGLEARLADDPRIDATTVDGRVGLVQFVQHGTDPHALIVRSPALAN
LVTMLFEQVWDSAEPLAAEADGDLESPADDRPNDTERLLLRLLSLGVKDEAAARHLGVSVRTVRRMVADLMTRLDARSRF
QAGTVAARRGWL
>Mature_332_residues
MLELLGLDDVTLSAYRLWLRHPDMDVDGVATAVGQANDTVRRSRDRLVELSLLLPSTEHPGHLVAVHPEAGLEHLLQAQH
EALIRRHERLVRARAQVSTFVSEYLDNRPGGDGAEVEHIDSADQARAELLTLVGRAEKEVLALHTRRGRPPALTAEVLPV
ELRALQRGVAMRSVLPRTVSTDETGVGYVRTVASHGLEARLADDPRIDATTVDGRVGLVQFVQHGTDPHALIVRSPALAN
LVTMLFEQVWDSAEPLAAEADGDLESPADDRPNDTERLLLRLLSLGVKDEAAARHLGVSVRTVRRMVADLMTRLDARSRF
QAGTVAARRGWL

Specific function: Involved in the regulation of the bialaphos biosynthetic pathway [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH luxR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016032
- InterPro:   IPR000792
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00196 GerE [H]

EC number: NA

Molecular weight: Translated: 36441; Mature: 36441

Theoretical pI: Translated: 6.20; Mature: 6.20

Prosite motif: PS50043 HTH_LUXR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLELLGLDDVTLSAYRLWLRHPDMDVDGVATAVGQANDTVRRSRDRLVELSLLLPSTEHP
CCEECCCCCHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHEEHHEECCCCCCC
GHLVAVHPEAGLEHLLQAQHEALIRRHERLVRARAQVSTFVSEYLDNRPGGDGAEVEHID
CCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHCC
SADQARAELLTLVGRAEKEVLALHTRRGRPPALTAEVLPVELRALQRGVAMRSVLPRTVS
CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCC
TDETGVGYVRTVASHGLEARLADDPRIDATTVDGRVGLVQFVQHGTDPHALIVRSPALAN
CCCCCCHHHHHHHHCCCEEEECCCCCCCCEECCCHHHHHHHHHCCCCCCEEEEECCHHHH
LVTMLFEQVWDSAEPLAAEADGDLESPADDRPNDTERLLLRLLSLGVKDEAAARHLGVSV
HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHCHHH
RTVRRMVADLMTRLDARSRFQAGTVAARRGWL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MLELLGLDDVTLSAYRLWLRHPDMDVDGVATAVGQANDTVRRSRDRLVELSLLLPSTEHP
CCEECCCCCHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHEEHHEECCCCCCC
GHLVAVHPEAGLEHLLQAQHEALIRRHERLVRARAQVSTFVSEYLDNRPGGDGAEVEHID
CCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHCC
SADQARAELLTLVGRAEKEVLALHTRRGRPPALTAEVLPVELRALQRGVAMRSVLPRTVS
CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCC
TDETGVGYVRTVASHGLEARLADDPRIDATTVDGRVGLVQFVQHGTDPHALIVRSPALAN
CCCCCCHHHHHHHHCCCEEEECCCCCCCCEECCCHHHHHHHHHCCCCCCEEEEECCHHHH
LVTMLFEQVWDSAEPLAAEADGDLESPADDRPNDTERLLLRLLSLGVKDEAAARHLGVSV
HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHCHHH
RTVRRMVADLMTRLDARSRFQAGTVAARRGWL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2066341 [H]