| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158314217
Identifier: 158314217
GI number: 158314217
Start: 2842995
End: 2843618
Strand: Direct
Name: 158314217
Synonym: Franean1_2387
Alternate gene names: NA
Gene position: 2842995-2843618 (Clockwise)
Preceding gene: 158314216
Following gene: 158314218
Centisome position: 31.65
GC content: 67.15
Gene sequence:
>624_bases GTGGACTCCAGGCTCTCTAGGACCCGAGCGGCCGATACACCGGCGCCGCATCCGGTAAAGATCATCGTTGCCGGTGGTTT CGGAGTCGGGAAGACGACGTTCGTCGGCGCCGTGAGCGAGATTCCCCCGCTCACCACCGAGGCCGCGATGACGTCCGCGA GTATCGGTGTTGACGACACCAGCGCCGTCGCCTCCAAGACGACGACGACGGTGGCCATGGACTTCGGTCGAATCACCCTG GTCGACAGCGTGATTCTCTACCTGTTCGGGACCCCCGGCCAGGACCGCTTCTGGTTCATGTGGGACGAACTCGTCCTGGG TGCGATCGGCGCGATCGTGCTCGTCGACACCCGACGTCTCGCCGACTCGTTTCCCGCCATCGACTACTTCGAGGAACGTG ACATCCCGTTCCTCATCGCCCTGAACCACTTCGAGGGCGCGCGCCGTTACCGCAGCGAGGACATCCGCGCGGCGCTGGAC CTCGACCCCCGCCGGCCGATGGTGCTGTGCGACGCCCGCCAGCGGGAGTCGGTGCGCCAGTCGCTCATCGCGTTGGTCCG CCACGCCCTGGAGGTGGTCTCCGCGGAGAGCCAGCGACCGGGACTGCCGACCGGCTCACGGTGA
Upstream 100 bases:
>100_bases GTGCTCGTCGGCGACATGCTCGACGCCGGGCTGGTGAGTGTGCACCGGCCCGAACGAACGTCGGACCGCCCCAGCGTGGC GATTATCGAAAAGGTGCTCA
Downstream 100 bases:
>100_bases ACGACACCGCGCGTGCCGCCCCAGCGCCCGCGGACCATCCGCTTCGACCTGGGAAGGGGATCTTGCTGGAGCTTCTTGGT CTCGACGACGTCACGCTGTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 207; Mature: 207
Protein sequence:
>207_residues MDSRLSRTRAADTPAPHPVKIIVAGGFGVGKTTFVGAVSEIPPLTTEAAMTSASIGVDDTSAVASKTTTTVAMDFGRITL VDSVILYLFGTPGQDRFWFMWDELVLGAIGAIVLVDTRRLADSFPAIDYFEERDIPFLIALNHFEGARRYRSEDIRAALD LDPRRPMVLCDARQRESVRQSLIALVRHALEVVSAESQRPGLPTGSR
Sequences:
>Translated_207_residues MDSRLSRTRAADTPAPHPVKIIVAGGFGVGKTTFVGAVSEIPPLTTEAAMTSASIGVDDTSAVASKTTTTVAMDFGRITL VDSVILYLFGTPGQDRFWFMWDELVLGAIGAIVLVDTRRLADSFPAIDYFEERDIPFLIALNHFEGARRYRSEDIRAALD LDPRRPMVLCDARQRESVRQSLIALVRHALEVVSAESQRPGLPTGSR >Mature_207_residues MDSRLSRTRAADTPAPHPVKIIVAGGFGVGKTTFVGAVSEIPPLTTEAAMTSASIGVDDTSAVASKTTTTVAMDFGRITL VDSVILYLFGTPGQDRFWFMWDELVLGAIGAIVLVDTRRLADSFPAIDYFEERDIPFLIALNHFEGARRYRSEDIRAALD LDPRRPMVLCDARQRESVRQSLIALVRHALEVVSAESQRPGLPTGSR
Specific function: Unknown
COG id: COG2229
COG function: function code R; Predicted GTPase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22605; Mature: 22605
Theoretical pI: Translated: 5.75; Mature: 5.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDSRLSRTRAADTPAPHPVKIIVAGGFGVGKTTFVGAVSEIPPLTTEAAMTSASIGVDDT CCCHHCHHHCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHCCCCCHHHHHHHCCCCCCCH SAVASKTTTTVAMDFGRITLVDSVILYLFGTPGQDRFWFMWDELVLGAIGAIVLVDTRRL HHHHHCCCEEEEECCCHHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHHEEEECHHH ADSFPAIDYFEERDIPFLIALNHFEGARRYRSEDIRAALDLDPRRPMVLCDARQRESVRQ HHCCCCCCCHHCCCCCEEEEECCHHHHHHHHHHHHHEEECCCCCCCEEEECCHHHHHHHH SLIALVRHALEVVSAESQRPGLPTGSR HHHHHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure MDSRLSRTRAADTPAPHPVKIIVAGGFGVGKTTFVGAVSEIPPLTTEAAMTSASIGVDDT CCCHHCHHHCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHCCCCCHHHHHHHCCCCCCCH SAVASKTTTTVAMDFGRITLVDSVILYLFGTPGQDRFWFMWDELVLGAIGAIVLVDTRRL HHHHHCCCEEEEECCCHHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHHEEEECHHH ADSFPAIDYFEERDIPFLIALNHFEGARRYRSEDIRAALDLDPRRPMVLCDARQRESVRQ HHCCCCCCCHHCCCCCEEEEECCHHHHHHHHHHHHHEEECCCCCCCEEEECCHHHHHHHH SLIALVRHALEVVSAESQRPGLPTGSR HHHHHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA