| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158314219
Identifier: 158314219
GI number: 158314219
Start: 2845012
End: 2845389
Strand: Direct
Name: 158314219
Synonym: Franean1_2389
Alternate gene names: NA
Gene position: 2845012-2845389 (Clockwise)
Preceding gene: 158314218
Following gene: 158314220
Centisome position: 31.67
GC content: 66.67
Gene sequence:
>378_bases GTGCCGACGGAATCCGGCTCGGTTCCGAACCAACGCACGACCAGCCAGCGGACGCTGATTGTCGCCCGGATGAACCCCGA AGACGCTGGTGCGGTCGCCGACGTCTTCGCGGAGTCGGACGCCGGCGAGCTTCCACATCTCGTCGGCGTCGCCCGGCGCG ACCTTTTCCGTTTCCACGGGCTGTACTTCCATCTCATCGAGAGCCGGGCGGACATCAACGGCACGCTGCCGCCGGTTCGG GAGCACCCGCTGTTCGTCGACGTGAACAGCAAGCTCGAGAAGTACATCGCGGCGTACGACCCGCAGACCTGGCGCGGCCC CCGGGACGCGATGGCCGACAGTTTCTACACCTGGGTGGCCGATCAGAACGGTCCCTGA
Upstream 100 bases:
>100_bases CCGGTGCCTTCGGGTCGATCCGGCCCTTCGGTAGCGGTCGGCCGTGTTCGAACACGCGCGGCGCAGCGTGTTCATCGTGA CTGGCGAAAGAGGAGATCGA
Downstream 100 bases:
>100_bases GCCCGCGCCCGGCCGCGCCGGCGCGGGACCAGGTTCCGCGCCGGTCCCGGGGCTCCGCCTCCGCGCGGCCGGCCGCCGCA GGACGAACGGGCCGTCCCGA
Product: polyketide synthesis cyclase
Products: NA
Alternate protein names: WhiE ORF VII [H]
Number of amino acids: Translated: 125; Mature: 124
Protein sequence:
>125_residues MPTESGSVPNQRTTSQRTLIVARMNPEDAGAVADVFAESDAGELPHLVGVARRDLFRFHGLYFHLIESRADINGTLPPVR EHPLFVDVNSKLEKYIAAYDPQTWRGPRDAMADSFYTWVADQNGP
Sequences:
>Translated_125_residues MPTESGSVPNQRTTSQRTLIVARMNPEDAGAVADVFAESDAGELPHLVGVARRDLFRFHGLYFHLIESRADINGTLPPVR EHPLFVDVNSKLEKYIAAYDPQTWRGPRDAMADSFYTWVADQNGP >Mature_124_residues PTESGSVPNQRTTSQRTLIVARMNPEDAGAVADVFAESDAGELPHLVGVARRDLFRFHGLYFHLIESRADINGTLPPVRE HPLFVDVNSKLEKYIAAYDPQTWRGPRDAMADSFYTWVADQNGP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011008 - InterPro: IPR006765 - ProDom: PD012644 [H]
Pfam domain/function: PF04673 Cyclase_polyket [H]
EC number: NA
Molecular weight: Translated: 13956; Mature: 13825
Theoretical pI: Translated: 5.14; Mature: 5.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTESGSVPNQRTTSQRTLIVARMNPEDAGAVADVFAESDAGELPHLVGVARRDLFRFHG CCCCCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH LYFHLIESRADINGTLPPVREHPLFVDVNSKLEKYIAAYDPQTWRGPRDAMADSFYTWVA HHHHHHHHHCCCCCCCCCCCCCCEEEECCHHHHHHHHHCCCCCCCCCHHHHHHHHEEEEE DQNGP CCCCC >Mature Secondary Structure PTESGSVPNQRTTSQRTLIVARMNPEDAGAVADVFAESDAGELPHLVGVARRDLFRFHG CCCCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH LYFHLIESRADINGTLPPVREHPLFVDVNSKLEKYIAAYDPQTWRGPRDAMADSFYTWVA HHHHHHHHHCCCCCCCCCCCCCCEEEECCHHHHHHHHHCCCCCCCCCHHHHHHHHEEEEE DQNGP CCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2077356; 12000953 [H]