Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

Click here to switch to the map view.

The map label for this gene is 158314006

Identifier: 158314006

GI number: 158314006

Start: 2607502

End: 2608656

Strand: Direct

Name: 158314006

Synonym: Franean1_2172

Alternate gene names: NA

Gene position: 2607502-2608656 (Clockwise)

Preceding gene: 158314005

Following gene: 158314009

Centisome position: 29.03

GC content: 65.11

Gene sequence:

>1155_bases
ATGACAAGCAAAATAGGGCGGCGTACGGCCATTCTAGCCACATCGGGCCTCGTTTCCGTTGCCGTTACCCTGGGTGCGAG
CGCCACCTCGGCACAGGCCCTGGTGCCGGGGGGCGGGCCGGAGGTGAAGAAGGAGAAGACCGTCATCAGCTACGAGCGGG
TCCTCTGGTACGACGGCAAGGACAAGAAGCACCACGAGAAGAAGGACCGGCCCTACTACGGCGGCGAGTCCTACGGTGAC
GAGTCCGGCGACCCGGCTGATCTCGTCGACACGCCGCTGGTTCCCGGTGTCTCGGTCGGTGCTGTCGACCCGGTTGAGGT
CGCCGACGCGGCGCTGGCTTCCGGTGACCTCCGCGGGAAGCCCTACAAGAAGCACAAGGATGTCTCGAAGCGTAAGGACG
CCATCAGCTACGAGCGGGTCCTCTGGTATGACGGCAAGGACAAGAAGCACCACGATAAGAAGGACAAGAAGCACCACGAG
AAGAAGGAGCGGCCATCCTACGGCGGCGAGTCCTACGGCGACGAGTCCGACGACCCGGCTGAGCTTGCCGCCACGCTGCC
GGTTCCCGGCGCCCCTGCCGGCTCCGACGGCCTGGCCGAGGTCGTCGACACGCCGCTGGTTCCCGGTGTGTCGGCCGGCG
TTGTCGACCCGGTTGAGGTCGCCGACGCGGCGCTGGCTTCCGGTGACCTCCGCGGGAAGCCCTACAAGAAGCACAAGGAT
GTCTCGAAGCGTAAGGACGCCATCAGCTACGAGCGGGTCCTCTGGTATGACGGCAAGGACAAGAAGCACCACGAGAAGAA
GGAGCGGCCCTCCTACGGCGGCGAGTCCTATGGCGACGAGTCCTACGGCGGCGAGTCCTACGGCGACGAGTCCTACGGTT
ACGTGGATGACGGGGACGATGCGGGAGACGCAGCCTCCGTCGCCTACCAGCCGGGCGGTGGCTACGACCGCCACTACAAG
GATCTGGTGAAGAAGAAGATCAAGATTACTCTCGAGAGGGTGCTCTGGTACAACTCGAAGCACCATGAGTACAAGTACCC
GTGGGTAGGGGCTCAGTCGTCGGAGCAGCCTCCCGTGACCACCGCCACCCCGCCCGGCCCGTCGCCGGTCGTGTCCCTGG
CACCGGTGACTCCCGCACCCCTTCCGGTTGCATAG

Upstream 100 bases:

>100_bases
CTGGAGAAACGCCTGTTTTGCGTTGCCGCCGTAAGGGAGGTCAGGCCGCTAGGTTGACGACCGTAGAACTACGGAAAAAG
ATCGTTCCGAAAGGTAGAAG

Downstream 100 bases:

>100_bases
CGGTTAGGAATGCCTGCCGAATTTCGGCGGGATAGAAGCTGTCTGGACCCAGCGGGAAAGCGACGAGGCGCCGCCGGCCG
CTGGCGGCGCCTCACCGTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 384; Mature: 383

Protein sequence:

>384_residues
MTSKIGRRTAILATSGLVSVAVTLGASATSAQALVPGGGPEVKKEKTVISYERVLWYDGKDKKHHEKKDRPYYGGESYGD
ESGDPADLVDTPLVPGVSVGAVDPVEVADAALASGDLRGKPYKKHKDVSKRKDAISYERVLWYDGKDKKHHDKKDKKHHE
KKERPSYGGESYGDESDDPAELAATLPVPGAPAGSDGLAEVVDTPLVPGVSAGVVDPVEVADAALASGDLRGKPYKKHKD
VSKRKDAISYERVLWYDGKDKKHHEKKERPSYGGESYGDESYGGESYGDESYGYVDDGDDAGDAASVAYQPGGGYDRHYK
DLVKKKIKITLERVLWYNSKHHEYKYPWVGAQSSEQPPVTTATPPGPSPVVSLAPVTPAPLPVA

Sequences:

>Translated_384_residues
MTSKIGRRTAILATSGLVSVAVTLGASATSAQALVPGGGPEVKKEKTVISYERVLWYDGKDKKHHEKKDRPYYGGESYGD
ESGDPADLVDTPLVPGVSVGAVDPVEVADAALASGDLRGKPYKKHKDVSKRKDAISYERVLWYDGKDKKHHDKKDKKHHE
KKERPSYGGESYGDESDDPAELAATLPVPGAPAGSDGLAEVVDTPLVPGVSAGVVDPVEVADAALASGDLRGKPYKKHKD
VSKRKDAISYERVLWYDGKDKKHHEKKERPSYGGESYGDESYGGESYGDESYGYVDDGDDAGDAASVAYQPGGGYDRHYK
DLVKKKIKITLERVLWYNSKHHEYKYPWVGAQSSEQPPVTTATPPGPSPVVSLAPVTPAPLPVA
>Mature_383_residues
TSKIGRRTAILATSGLVSVAVTLGASATSAQALVPGGGPEVKKEKTVISYERVLWYDGKDKKHHEKKDRPYYGGESYGDE
SGDPADLVDTPLVPGVSVGAVDPVEVADAALASGDLRGKPYKKHKDVSKRKDAISYERVLWYDGKDKKHHDKKDKKHHEK
KERPSYGGESYGDESDDPAELAATLPVPGAPAGSDGLAEVVDTPLVPGVSAGVVDPVEVADAALASGDLRGKPYKKHKDV
SKRKDAISYERVLWYDGKDKKHHEKKERPSYGGESYGDESYGGESYGDESYGYVDDGDDAGDAASVAYQPGGGYDRHYKD
LVKKKIKITLERVLWYNSKHHEYKYPWVGAQSSEQPPVTTATPPGPSPVVSLAPVTPAPLPVA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41430; Mature: 41299

Theoretical pI: Translated: 6.59; Mature: 6.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.3 %Met     (Translated Protein)
0.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSKIGRRTAILATSGLVSVAVTLGASATSAQALVPGGGPEVKKEKTVISYERVLWYDGK
CCCCCCCCEEEEECCCHHHHHHHHCCCCCCCEEECCCCCCCCCCCHHHEEEEEEEEECCC
DKKHHEKKDRPYYGGESYGDESGDPADLVDTPLVPGVSVGAVDPVEVADAALASGDLRGK
CCHHHHHCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCC
PYKKHKDVSKRKDAISYERVLWYDGKDKKHHDKKDKKHHEKKERPSYGGESYGDESDDPA
CCHHHHHHHHHHHHHCEEEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHH
ELAATLPVPGAPAGSDGLAEVVDTPLVPGVSAGVVDPVEVADAALASGDLRGKPYKKHKD
HHEEECCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHH
VSKRKDAISYERVLWYDGKDKKHHEKKERPSYGGESYGDESYGGESYGDESYGYVDDGDD
HHHHHHHHCEEEEEEECCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
AGDAASVAYQPGGGYDRHYKDLVKKKIKITLERVLWYNSKHHEYKYPWVGAQSSEQPPVT
CCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCCCCC
TATPPGPSPVVSLAPVTPAPLPVA
CCCCCCCCCEEEECCCCCCCCCCC
>Mature Secondary Structure 
TSKIGRRTAILATSGLVSVAVTLGASATSAQALVPGGGPEVKKEKTVISYERVLWYDGK
CCCCCCCEEEEECCCHHHHHHHHCCCCCCCEEECCCCCCCCCCCHHHEEEEEEEEECCC
DKKHHEKKDRPYYGGESYGDESGDPADLVDTPLVPGVSVGAVDPVEVADAALASGDLRGK
CCHHHHHCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCC
PYKKHKDVSKRKDAISYERVLWYDGKDKKHHDKKDKKHHEKKERPSYGGESYGDESDDPA
CCHHHHHHHHHHHHHCEEEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHH
ELAATLPVPGAPAGSDGLAEVVDTPLVPGVSAGVVDPVEVADAALASGDLRGKPYKKHKD
HHEEECCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHH
VSKRKDAISYERVLWYDGKDKKHHEKKERPSYGGESYGDESYGGESYGDESYGYVDDGDD
HHHHHHHHCEEEEEEECCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
AGDAASVAYQPGGGYDRHYKDLVKKKIKITLERVLWYNSKHHEYKYPWVGAQSSEQPPVT
CCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCCCCC
TATPPGPSPVVSLAPVTPAPLPVA
CCCCCCCCCEEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA