| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158314006
Identifier: 158314006
GI number: 158314006
Start: 2607502
End: 2608656
Strand: Direct
Name: 158314006
Synonym: Franean1_2172
Alternate gene names: NA
Gene position: 2607502-2608656 (Clockwise)
Preceding gene: 158314005
Following gene: 158314009
Centisome position: 29.03
GC content: 65.11
Gene sequence:
>1155_bases ATGACAAGCAAAATAGGGCGGCGTACGGCCATTCTAGCCACATCGGGCCTCGTTTCCGTTGCCGTTACCCTGGGTGCGAG CGCCACCTCGGCACAGGCCCTGGTGCCGGGGGGCGGGCCGGAGGTGAAGAAGGAGAAGACCGTCATCAGCTACGAGCGGG TCCTCTGGTACGACGGCAAGGACAAGAAGCACCACGAGAAGAAGGACCGGCCCTACTACGGCGGCGAGTCCTACGGTGAC GAGTCCGGCGACCCGGCTGATCTCGTCGACACGCCGCTGGTTCCCGGTGTCTCGGTCGGTGCTGTCGACCCGGTTGAGGT CGCCGACGCGGCGCTGGCTTCCGGTGACCTCCGCGGGAAGCCCTACAAGAAGCACAAGGATGTCTCGAAGCGTAAGGACG CCATCAGCTACGAGCGGGTCCTCTGGTATGACGGCAAGGACAAGAAGCACCACGATAAGAAGGACAAGAAGCACCACGAG AAGAAGGAGCGGCCATCCTACGGCGGCGAGTCCTACGGCGACGAGTCCGACGACCCGGCTGAGCTTGCCGCCACGCTGCC GGTTCCCGGCGCCCCTGCCGGCTCCGACGGCCTGGCCGAGGTCGTCGACACGCCGCTGGTTCCCGGTGTGTCGGCCGGCG TTGTCGACCCGGTTGAGGTCGCCGACGCGGCGCTGGCTTCCGGTGACCTCCGCGGGAAGCCCTACAAGAAGCACAAGGAT GTCTCGAAGCGTAAGGACGCCATCAGCTACGAGCGGGTCCTCTGGTATGACGGCAAGGACAAGAAGCACCACGAGAAGAA GGAGCGGCCCTCCTACGGCGGCGAGTCCTATGGCGACGAGTCCTACGGCGGCGAGTCCTACGGCGACGAGTCCTACGGTT ACGTGGATGACGGGGACGATGCGGGAGACGCAGCCTCCGTCGCCTACCAGCCGGGCGGTGGCTACGACCGCCACTACAAG GATCTGGTGAAGAAGAAGATCAAGATTACTCTCGAGAGGGTGCTCTGGTACAACTCGAAGCACCATGAGTACAAGTACCC GTGGGTAGGGGCTCAGTCGTCGGAGCAGCCTCCCGTGACCACCGCCACCCCGCCCGGCCCGTCGCCGGTCGTGTCCCTGG CACCGGTGACTCCCGCACCCCTTCCGGTTGCATAG
Upstream 100 bases:
>100_bases CTGGAGAAACGCCTGTTTTGCGTTGCCGCCGTAAGGGAGGTCAGGCCGCTAGGTTGACGACCGTAGAACTACGGAAAAAG ATCGTTCCGAAAGGTAGAAG
Downstream 100 bases:
>100_bases CGGTTAGGAATGCCTGCCGAATTTCGGCGGGATAGAAGCTGTCTGGACCCAGCGGGAAAGCGACGAGGCGCCGCCGGCCG CTGGCGGCGCCTCACCGTTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 384; Mature: 383
Protein sequence:
>384_residues MTSKIGRRTAILATSGLVSVAVTLGASATSAQALVPGGGPEVKKEKTVISYERVLWYDGKDKKHHEKKDRPYYGGESYGD ESGDPADLVDTPLVPGVSVGAVDPVEVADAALASGDLRGKPYKKHKDVSKRKDAISYERVLWYDGKDKKHHDKKDKKHHE KKERPSYGGESYGDESDDPAELAATLPVPGAPAGSDGLAEVVDTPLVPGVSAGVVDPVEVADAALASGDLRGKPYKKHKD VSKRKDAISYERVLWYDGKDKKHHEKKERPSYGGESYGDESYGGESYGDESYGYVDDGDDAGDAASVAYQPGGGYDRHYK DLVKKKIKITLERVLWYNSKHHEYKYPWVGAQSSEQPPVTTATPPGPSPVVSLAPVTPAPLPVA
Sequences:
>Translated_384_residues MTSKIGRRTAILATSGLVSVAVTLGASATSAQALVPGGGPEVKKEKTVISYERVLWYDGKDKKHHEKKDRPYYGGESYGD ESGDPADLVDTPLVPGVSVGAVDPVEVADAALASGDLRGKPYKKHKDVSKRKDAISYERVLWYDGKDKKHHDKKDKKHHE KKERPSYGGESYGDESDDPAELAATLPVPGAPAGSDGLAEVVDTPLVPGVSAGVVDPVEVADAALASGDLRGKPYKKHKD VSKRKDAISYERVLWYDGKDKKHHEKKERPSYGGESYGDESYGGESYGDESYGYVDDGDDAGDAASVAYQPGGGYDRHYK DLVKKKIKITLERVLWYNSKHHEYKYPWVGAQSSEQPPVTTATPPGPSPVVSLAPVTPAPLPVA >Mature_383_residues TSKIGRRTAILATSGLVSVAVTLGASATSAQALVPGGGPEVKKEKTVISYERVLWYDGKDKKHHEKKDRPYYGGESYGDE SGDPADLVDTPLVPGVSVGAVDPVEVADAALASGDLRGKPYKKHKDVSKRKDAISYERVLWYDGKDKKHHDKKDKKHHEK KERPSYGGESYGDESDDPAELAATLPVPGAPAGSDGLAEVVDTPLVPGVSAGVVDPVEVADAALASGDLRGKPYKKHKDV SKRKDAISYERVLWYDGKDKKHHEKKERPSYGGESYGDESYGGESYGDESYGYVDDGDDAGDAASVAYQPGGGYDRHYKD LVKKKIKITLERVLWYNSKHHEYKYPWVGAQSSEQPPVTTATPPGPSPVVSLAPVTPAPLPVA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41430; Mature: 41299
Theoretical pI: Translated: 6.59; Mature: 6.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.3 %Met (Translated Protein) 0.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSKIGRRTAILATSGLVSVAVTLGASATSAQALVPGGGPEVKKEKTVISYERVLWYDGK CCCCCCCCEEEEECCCHHHHHHHHCCCCCCCEEECCCCCCCCCCCHHHEEEEEEEEECCC DKKHHEKKDRPYYGGESYGDESGDPADLVDTPLVPGVSVGAVDPVEVADAALASGDLRGK CCHHHHHCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCC PYKKHKDVSKRKDAISYERVLWYDGKDKKHHDKKDKKHHEKKERPSYGGESYGDESDDPA CCHHHHHHHHHHHHHCEEEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHH ELAATLPVPGAPAGSDGLAEVVDTPLVPGVSAGVVDPVEVADAALASGDLRGKPYKKHKD HHEEECCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHH VSKRKDAISYERVLWYDGKDKKHHEKKERPSYGGESYGDESYGGESYGDESYGYVDDGDD HHHHHHHHCEEEEEEECCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC AGDAASVAYQPGGGYDRHYKDLVKKKIKITLERVLWYNSKHHEYKYPWVGAQSSEQPPVT CCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCCCCC TATPPGPSPVVSLAPVTPAPLPVA CCCCCCCCCEEEECCCCCCCCCCC >Mature Secondary Structure TSKIGRRTAILATSGLVSVAVTLGASATSAQALVPGGGPEVKKEKTVISYERVLWYDGK CCCCCCCEEEEECCCHHHHHHHHCCCCCCCEEECCCCCCCCCCCHHHEEEEEEEEECCC DKKHHEKKDRPYYGGESYGDESGDPADLVDTPLVPGVSVGAVDPVEVADAALASGDLRGK CCHHHHHCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCC PYKKHKDVSKRKDAISYERVLWYDGKDKKHHDKKDKKHHEKKERPSYGGESYGDESDDPA CCHHHHHHHHHHHHHCEEEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHH ELAATLPVPGAPAGSDGLAEVVDTPLVPGVSAGVVDPVEVADAALASGDLRGKPYKKHKD HHEEECCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHH VSKRKDAISYERVLWYDGKDKKHHEKKERPSYGGESYGDESYGGESYGDESYGYVDDGDD HHHHHHHHCEEEEEEECCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC AGDAASVAYQPGGGYDRHYKDLVKKKIKITLERVLWYNSKHHEYKYPWVGAQSSEQPPVT CCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCCCCC TATPPGPSPVVSLAPVTPAPLPVA CCCCCCCCCEEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA