Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

Click here to switch to the map view.

The map label for this gene is 158314009

Identifier: 158314009

GI number: 158314009

Start: 2610033

End: 2610812

Strand: Direct

Name: 158314009

Synonym: Franean1_2175

Alternate gene names: NA

Gene position: 2610033-2610812 (Clockwise)

Preceding gene: 158314006

Following gene: 158314011

Centisome position: 29.06

GC content: 70.51

Gene sequence:

>780_bases
GTGCACCACCGCCGCGGCGTCGGCACCAGGCCTACTACTGTCCTTGTCATGGACCTGGCCGTGACGGAGGCTGGCGAGGG
CGAGGCGCTCGTGGTGTTCGTGCACGGTGTTCTCGACAGCGGGCGCTCGTTCTCCCGGGTGGTCGACCTGCTCGCGTCCC
AGTGCCGCATGCGCTGGTACGACCGCCGCGGTTACGGGACGTCGACGAACGCGACCGGCGCACCGGTGAACGTGAACGGC
CACATCGAGGATCTCGTCGCGGTTCTGGACGGCCGCCGCGCGGTCGTCGTCGGCCATTCGTTCGGCGGGGTCATCGCCGC
CGGGGCCGCGGTGCGGGCGCCGGAGAGCGTCGCGGCCGTGGTGCTCTACGAGACGGTGATGGCGTGGGTGCCGGGGTGGG
ACGACCGGCGCATGCGGCAGATGCTGTGGAGCGAGGACCCTGAGGACGCGGGCATGCGCCTGATGCTCGGGGCGAAATAC
GACGCGATGAGCGCCGAGGCGCGGCTTCGGCTCCGGCCGCAGGCCCGCGCGTTCGTCACGGAGGAACGGTCGATCCGGGC
GCCGACACCGCCGTACGACATCGCCGCGCTGGAGATTCCCGTCGTGTACGGCTTCAGCGAGAGCTTCCCCGTCGTCGTGA
TGCAGCAGCACCTGAGCACGGTGGTGCGTGACGTCGAGCTCGTGACTTTTCCTGGCGACCACTTCGCCCATCGCACGGCA
CCGGCGGAATTCGCCGGGCTTGTCCAGTTGGCGGTTCGGCGCGCGTCCGGGAAGGCGTAG

Upstream 100 bases:

>100_bases
TCCAGGTTCACAGCACTCACGATAGCCAGCCGTTCCGATGGGCCGGTGCGTCCGGCCTGGCGGCCAGCCGGGATGTTCCT
GGTCGACGGTGCACGTGCGG

Downstream 100 bases:

>100_bases
TCCCGCGCCCCTCGCGGCGCGCGGGATTCGGCCGCGGGCGGGTCAGCTGAGCCAACTGATCGGATGATCACCGATCAGGA
CCCGGGCCGTCAGGACGACG

Product: alpha/beta hydrolase fold protein

Products: NA

Alternate protein names: Alpha/Beta Hydrolase Fold

Number of amino acids: Translated: 259; Mature: 259

Protein sequence:

>259_residues
MHHRRGVGTRPTTVLVMDLAVTEAGEGEALVVFVHGVLDSGRSFSRVVDLLASQCRMRWYDRRGYGTSTNATGAPVNVNG
HIEDLVAVLDGRRAVVVGHSFGGVIAAGAAVRAPESVAAVVLYETVMAWVPGWDDRRMRQMLWSEDPEDAGMRLMLGAKY
DAMSAEARLRLRPQARAFVTEERSIRAPTPPYDIAALEIPVVYGFSESFPVVVMQQHLSTVVRDVELVTFPGDHFAHRTA
PAEFAGLVQLAVRRASGKA

Sequences:

>Translated_259_residues
MHHRRGVGTRPTTVLVMDLAVTEAGEGEALVVFVHGVLDSGRSFSRVVDLLASQCRMRWYDRRGYGTSTNATGAPVNVNG
HIEDLVAVLDGRRAVVVGHSFGGVIAAGAAVRAPESVAAVVLYETVMAWVPGWDDRRMRQMLWSEDPEDAGMRLMLGAKY
DAMSAEARLRLRPQARAFVTEERSIRAPTPPYDIAALEIPVVYGFSESFPVVVMQQHLSTVVRDVELVTFPGDHFAHRTA
PAEFAGLVQLAVRRASGKA
>Mature_259_residues
MHHRRGVGTRPTTVLVMDLAVTEAGEGEALVVFVHGVLDSGRSFSRVVDLLASQCRMRWYDRRGYGTSTNATGAPVNVNG
HIEDLVAVLDGRRAVVVGHSFGGVIAAGAAVRAPESVAAVVLYETVMAWVPGWDDRRMRQMLWSEDPEDAGMRLMLGAKY
DAMSAEARLRLRPQARAFVTEERSIRAPTPPYDIAALEIPVVYGFSESFPVVVMQQHLSTVVRDVELVTFPGDHFAHRTA
PAEFAGLVQLAVRRASGKA

Specific function: Unknown

COG id: COG0596

COG function: function code R; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28237; Mature: 28237

Theoretical pI: Translated: 7.30; Mature: 7.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHHRRGVGTRPTTVLVMDLAVTEAGEGEALVVFVHGVLDSGRSFSRVVDLLASQCRMRWY
CCCCCCCCCCCCEEEEEEEEEECCCCCCEEEEEEEEHHCCCCHHHHHHHHHHHHHHHHHH
DRRGYGTSTNATGAPVNVNGHIEDLVAVLDGRRAVVVGHSFGGVIAAGAAVRAPESVAAV
HCCCCCCCCCCCCCCEECCCCHHHHHHHHCCCEEEEEECCCCCHHHCCCHHCCCHHHHHH
VLYETVMAWVPGWDDRRMRQMLWSEDPEDAGMRLMLGAKYDAMSAEARLRLRPQARAFVT
HHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCEEEEECCCHHEEEE
EERSIRAPTPPYDIAALEIPVVYGFSESFPVVVMQQHLSTVVRDVELVTFPGDHFAHRTA
CCCCCCCCCCCCCEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHEEEEEECCCHHHHCCC
PAEFAGLVQLAVRRASGKA
HHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MHHRRGVGTRPTTVLVMDLAVTEAGEGEALVVFVHGVLDSGRSFSRVVDLLASQCRMRWY
CCCCCCCCCCCCEEEEEEEEEECCCCCCEEEEEEEEHHCCCCHHHHHHHHHHHHHHHHHH
DRRGYGTSTNATGAPVNVNGHIEDLVAVLDGRRAVVVGHSFGGVIAAGAAVRAPESVAAV
HCCCCCCCCCCCCCCEECCCCHHHHHHHHCCCEEEEEECCCCCHHHCCCHHCCCHHHHHH
VLYETVMAWVPGWDDRRMRQMLWSEDPEDAGMRLMLGAKYDAMSAEARLRLRPQARAFVT
HHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCEEEEECCCHHEEEE
EERSIRAPTPPYDIAALEIPVVYGFSESFPVVVMQQHLSTVVRDVELVTFPGDHFAHRTA
CCCCCCCCCCCCCEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHEEEEEECCCHHHHCCC
PAEFAGLVQLAVRRASGKA
HHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA